Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010068G12.5 |
| Conread position: | 56-723 |
| Cow position: | chr21:39153003-39152363 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 63 |
| Conread position: | 56-723 |
| Cow position: | chr21:40604841-40605481 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 479, 83 |
| Conread position: | 56-723 |
| Cow position: | chr21:40655209-40654569 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 66 |
| Conread position: | 56-723 |
| Cow position: | chr21:40677263-40676614 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 56-723 |
| Cow position: | chr21:40705409-40704769 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 63 |
| Conread position: | 56-730 |
| Cow position: | chr21:40639740-40639084 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 83 |
| Conread position: | 224-506 |
| Cow position: | chr21:39175677-39175394 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 235-730 |
| Cow position: | chr21:39199258-39198768 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 276, 58 |
| Conread position: | 237-728 |
| Cow position: | chr21:39247705-39248190 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 240-723 |
| Cow position: | chr21:39304885-39305365 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 43 |
| Conread position: | 241-728 |
| Cow position: | chr21:38962547-38962060 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 243-723 |
| Cow position: | chr21:38910076-38909596 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 341 |
| Conread position: | 722-932 |
| Cow position: | chr21:40607405-40607612 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 722-991 |
| Cow position: | chr21:39149955-39149689 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 722-991 |
| Cow position: | chr21:40652739-40652473 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 722-991 |
| Cow position: | chr21:40674986-40674720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 722-991 |
| Cow position: | chr21:40702935-40702669 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 722-993 |
| Cow position: | chr21:40637247-40636976 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 996-1150 |
| Cow position: | chr21:40672637-40672483 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 134, 140 |
| Conread position: | 996-1151 |
| Cow position: | chr21:39148551-39148399 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 996-1151 |
| Cow position: | chr21:40650859-40650707 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 996-1151 |
| Cow position: | chr21:40701527-40701375 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 996-1154 |
| Cow position: | chr21:40626533-40626374 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 144, 133 |
| Conread position: | 996-1156 |
| Cow position: | chr21:40634371-40634210 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 139, 133 |
| Conread position: | 1001-1151 |
| Cow position: | chr21:40610220-40610370 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1146-1409 |
| Cow position: | chr21:40633161-40632894 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1146-1410 |
| Cow position: | chr21:40611952-40612216 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 1146-1411 |
| Cow position: | chr21:39147350-39147088 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 1146-1411 |
| Cow position: | chr21:40649650-40649385 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1146-1411 |
| Cow position: | chr21:40700321-40700058 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 90 |
| Conread position: | 1146-1538 |
| Cow position: | chr21:40671456-40671073 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 213 |
| Conread position: | 1247-1530 |
| Cow position: | chr21:40624996-40624723 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 114 |
| Conread position: | 1405-1529 |
| Cow position: | chr21:39147063-39146938 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 1405-1529 |
| Cow position: | chr21:40700033-40699908 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 122 |
Show alignments to all cow chromosomes.