Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010071B02.5 |
| Conread position: | 7-187 |
| Cow position: | chr25:33018302-33018483 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 19-168 |
| Cow position: | chr25:34646102-34646253 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 33-168 |
| Cow position: | chr25:34516043-34516178 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-168 |
| Cow position: | chr25:34518565-34518699 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 161-263 |
| Cow position: | chr25:34522569-34522671 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-529 |
| Cow position: | chr25:32983428-32983542 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 418-529 |
| Cow position: | chr25:34666328-34666439 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 528-618 |
| Cow position: | chr25:32983801-32983891 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 528-618 |
| Cow position: | chr25:34666685-34666775 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 620-766 |
| Cow position: | chr25:34669868-34670014 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 620-767 |
| Cow position: | chr25:32985210-32985357 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 756-893 |
| Cow position: | chr25:34619105-34619242 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 756-893 |
| Cow position: | chr25:34677381-34677518 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 756-895 |
| Cow position: | chr25:32988625-32988764 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 961-1124 |
| Cow position: | chr25:32995801-32995964 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 961-1124 |
| Cow position: | chr25:34623697-34623860 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 961-1124 |
| Cow position: | chr25:34685154-34685317 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1122-1355 |
| Cow position: | chr25:32998365-32998598 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1122-1355 |
| Cow position: | chr25:34626524-34626757 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1122-1355 |
| Cow position: | chr25:34688721-34688954 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1349-1513 |
| Cow position: | chr25:33000779-33000943 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1349-1513 |
| Cow position: | chr25:34628991-34629155 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1349-1513 |
| Cow position: | chr25:34691458-34691622 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1509-1712 |
| Cow position: | chr25:33002689-33002891 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 170 |
| Conread position: | 1511-1716 |
| Cow position: | chr25:34631444-34631648 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 186, 134 |
| Conread position: | 1511-1716 |
| Cow position: | chr25:34694010-34694214 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 186, 134 |
Show alignments to all cow chromosomes.