Cow genome map


           Conread name:
           Ss1.1-Liv1-LVR010071B07.5
        

               Conread position:
               1-140
               

               Cow position:
               chr7:11861309-11861449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               140-313
               

               Cow position:
               chr7:11887568-11887741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-434
               

               Cow position:
               chr7:11890597-11890714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-553
               

               Cow position:
               chr7:11891522-11891642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-756
               

               Cow position:
               chr7:11892810-11892906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               754-885
               

               Cow position:
               chr7:11893115-11893246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               883-990
               

               Cow position:
               chr7:11893615-11893722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               992-1155
               

               Cow position:
               chr7:11895304-11895467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               137
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1145-1645
               

               Cow position:
               chr7:11895702-11896199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 297
               
Show alignments to all cow chromosomes.