Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010097F10.5.5 |
| Conread position: | 1-151 |
| Cow position: | chr23:21263008-21263154 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-154 |
| Cow position: | chr23:21236056-21236209 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-151 |
| Cow position: | chr23:22948008-22948151 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-152 |
| Cow position: | chr23:21278710-21278856 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 10-151 |
| Cow position: | chr23:5385292-5385432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 149-391 |
| Cow position: | chr23:5449025-5448783 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-434 |
| Cow position: | chr23:21283947-21284235 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 149-444 |
| Cow position: | chr23:5390957-5391253 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 11, 233 |
| Conread position: | 152-430 |
| Cow position: | chr23:22932422-22932700 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 239, 248 |
| Conread position: | 181-390 |
| Cow position: | chr23:5464267-5464058 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-430 |
| Cow position: | chr23:21242372-21242621 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-707 |
| Cow position: | chr23:5398918-5399202 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-705 |
| Cow position: | chr23:5446513-5446235 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-707 |
| Cow position: | chr23:21267650-21267923 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 427-707 |
| Cow position: | chr23:22907855-22908132 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:21244789-21245086 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:22934740-22935037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:22957047-22957344 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 431-707 |
| Cow position: | chr23:5463573-5463296 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:21245812-21245923 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:21268654-21268765 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:22908834-22908945 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:22958043-22958154 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-818 |
| Cow position: | chr23:22936840-22936949 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 813-1081 |
| Cow position: | chr23:22937697-22937963 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 839-1031 |
| Cow position: | chr23:21246706-21246899 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 839-1084 |
| Cow position: | chr23:21269560-21269794 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 167, 36 |
Show alignments to all cow chromosomes.