Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010099C02.5 |
| Conread position: | 13-465 |
| Cow position: | chr8:33204095-33203627 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 128 |
| Conread position: | 393-699 |
| Cow position: | chr8:40821393-40821699 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 393-699 |
| Cow position: | chr8:40822104-40822407 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 393-701 |
| Cow position: | chr8:40820601-40820906 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 393-707 |
| Cow position: | chr8:40820563-40820879 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 161 |
| Conread position: | 393-731 |
| Cow position: | chr8:40821354-40821698 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 266 |
| Conread position: | 393-739 |
| Cow position: | chr8:40820317-40820653 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 393-747 |
| Cow position: | chr8:40820233-40820584 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 393-747 |
| Cow position: | chr8:40822020-40822371 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 394-682 |
| Cow position: | chr8:40822159-40822453 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 394-701 |
| Cow position: | chr8:40822138-40822448 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 394-728 |
| Cow position: | chr8:40820755-40821086 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 394-731 |
| Cow position: | chr8:40821532-40821866 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 394-747 |
| Cow position: | chr8:40820555-40820898 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 399-696 |
| Cow position: | chr8:40820162-40820452 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 399-699 |
| Cow position: | chr8:40821135-40821429 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 247, 23 |
| Conread position: | 399-699 |
| Cow position: | chr8:40821462-40821762 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 399-707 |
| Cow position: | chr8:40821669-40821968 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 399-747 |
| Cow position: | chr8:40820904-40821249 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 400-707 |
| Cow position: | chr8:40820728-40821035 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 401-699 |
| Cow position: | chr8:40821911-40822215 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 401-707 |
| Cow position: | chr8:40821266-40821572 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 401-707 |
| Cow position: | chr8:40821818-40822127 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 401-707 |
| Cow position: | chr8:40822124-40822433 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 401-744 |
| Cow position: | chr8:40821620-40821963 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 401-747 |
| Cow position: | chr8:40821041-40821396 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 404-731 |
| Cow position: | chr8:40820512-40820840 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 419-707 |
| Cow position: | chr8:40820154-40820451 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 439-731 |
| Cow position: | chr8:40821478-40821782 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 439-739 |
| Cow position: | chr8:40821718-40822021 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 440-747 |
| Cow position: | chr8:40821629-40821936 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 455-707 |
| Cow position: | chr8:40820940-40821191 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 457-707 |
| Cow position: | chr8:40821238-40821488 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-731 |
| Cow position: | chr8:40821850-40822118 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 457-739 |
| Cow position: | chr8:40821892-40822180 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 95, 90 |
| Conread position: | 539-666 |
| Cow position: | chr8:33201524-33201397 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 119 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 665-855 |
| Cow position: | chr8:33199215-33199025 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 819-982 |
| Cow position: | chr8:33193852-33193689 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 978-1127 |
| Cow position: | chr8:33190723-33190574 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1126-1452 |
| Cow position: | chr8:33181775-33181445 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.