Cow genome map


           Conread name:
           Ss1.1-Liv1-LVR010105G08.5.5
        

               Conread position:
               1-262
               

               Cow position:
               chr1:54908391-54908651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               270-389
               

               Cow position:
               chr1:49453285-49453404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-478
               

               Cow position:
               chr1:49454178-49454268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               480-643
               

               Cow position:
               chr1:49455694-49455857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               138
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               720-820
               

               Cow position:
               chr1:49457610-49457710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               805-1404
               

               Cow position:
               chr1:49458924-49459518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 14
               

               Conread position:
               1178-1833
               

               Cow position:
               chr1:49459233-49459891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               659
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               444, 0
               

               Conread position:
               1204-1475
               

               Cow position:
               chr1:49459214-49459482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               254, 0
               
Show alignments to all cow chromosomes.