Cow genome map
| Conread name: | Ss1.1-Liv1-LVR01A120087.5 |
| Conread position: | 73-257 |
| Cow position: | chr1:88732583-88732397 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 87-258 |
| Cow position: | chr1:88667369-88667198 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-369 |
| Cow position: | chr1:88729461-88729350 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 263-368 |
| Cow position: | chr1:88659675-88659570 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-502 |
| Cow position: | chr1:88728547-88728415 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 373-547 |
| Cow position: | chr1:88658822-88658648 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 537-714 |
| Cow position: | chr1:88657784-88657608 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 539-698 |
| Cow position: | chr1:88727207-88727049 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 135 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 751-931 |
| Cow position: | chr1:88656314-88656134 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 751-931 |
| Cow position: | chr1:88722532-88722352 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 928-1094 |
| Cow position: | chr1:88721050-88720884 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 101 |
| Conread position: | 928-1101 |
| Cow position: | chr1:88655445-88655272 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1263 |
| Cow position: | chr1:88653623-88653473 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1263-1353 |
| Cow position: | chr1:88717321-88717231 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1263-1354 |
| Cow position: | chr1:88651172-88651081 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1391-1598 |
| Cow position: | chr1:88713477-88713273 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 169, 37 |
| Conread position: | 1392-1558 |
| Cow position: | chr1:88649093-88648930 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1552-1700 |
| Cow position: | chr1:88643963-88643815 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1762-1910 |
| Cow position: | chr1:88697160-88697012 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1762-1948 |
| Cow position: | chr1:88639231-88639045 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1945-2134 |
| Cow position: | chr1:88637851-88637662 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2129-2340 |
| Cow position: | chr1:88630758-88630549 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2177-2340 |
| Cow position: | chr1:88630107-88629946 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 140 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.