Cow genome map
| Conread name: | Ss1.1-Liv1-LVR01E110085.5 |
| Conread position: | 1-194 |
| Cow position: | chr5:60202820-60202625 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 190-315 |
| Cow position: | chr5:60201730-60201600 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 312-523 |
| Cow position: | chr5:60201362-60201151 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 519-693 |
| Cow position: | chr5:60200992-60200818 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 145 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 695-824 |
| Cow position: | chr5:60199226-60199097 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 823-1020 |
| Cow position: | chr5:60198680-60198483 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 840-1020 |
| Cow position: | chr5:60132804-60132625 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1025-1178 |
| Cow position: | chr5:60132432-60132279 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 132 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1025-1178 |
| Cow position: | chr5:60198286-60198133 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 134 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1179-1298 |
| Cow position: | chr5:60197418-60197299 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1179-1323 |
| Cow position: | chr5:60131525-60131382 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 50 |
| Conread position: | 1376-1500 |
| Cow position: | chr5:60196113-60195989 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1377-1500 |
| Cow position: | chr5:60127374-60127251 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1572-1963 |
| Cow position: | chr5:60192857-60192463 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 0 |
| Conread position: | 2083-2801 |
| Cow position: | chr5:60192463-60191728 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 337 |
Show alignments to all cow chromosomes.