Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10017B03.5 |
| Conread position: | 486-671 |
| Cow position: | chr11:15155106-15155287 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 144, 51 |
| Conread position: | 514-674 |
| Cow position: | chr11:53452136-53452299 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 523-696 |
| Cow position: | chr11:45890158-45889989 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 532-674 |
| Cow position: | chr11:372943-373094 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 532-674 |
| Cow position: | chr11:40275409-40275551 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 532-674 |
| Cow position: | chr11:40278901-40279043 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 540-674 |
| Cow position: | chr11:54058174-54058041 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 541-674 |
| Cow position: | chr11:7332925-7333060 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 542-674 |
| Cow position: | chr11:47565755-47565887 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 565-670 |
| Cow position: | chr11:5188286-5188183 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 565-670 |
| Cow position: | chr11:76851677-76851783 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 565-674 |
| Cow position: | chr11:7001769-7001879 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 565-674 |
| Cow position: | chr11:8828472-8828582 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 566-674 |
| Cow position: | chr11:19268932-19269041 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 566-674 |
| Cow position: | chr11:54244832-54244723 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 567-670 |
| Cow position: | chr11:6729826-6729722 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 568-671 |
| Cow position: | chr11:11460629-11460528 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 569-668 |
| Cow position: | chr11:66265730-66265631 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 569-674 |
| Cow position: | chr11:27681657-27681551 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 73 |
Show alignments to all cow chromosomes.