Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10017B03.5
        

               Conread position:
               532-674
               

               Cow position:
               chr21:34564945-34565083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               536-671
               

               Cow position:
               chr21:37120943-37121077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               541-674
               

               Cow position:
               chr21:30053154-30053288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               544-674
               

               Cow position:
               chr21:11675793-11675922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               555-674
               

               Cow position:
               chr21:23974026-23974144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               565-670
               

               Cow position:
               chr21:8282504-8282398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               565-674
               

               Cow position:
               chr21:33947014-33947122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               573-674
               

               Cow position:
               chr21:12087829-12087727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               574-670
               

               Cow position:
               chr21:30150011-30150107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.