Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10017B03.5
        

               Conread position:
               488-674
               

               Cow position:
               chr7:12754871-12755046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               140, 7
               

               Conread position:
               532-674
               

               Cow position:
               chr7:4512569-4512710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               541-671
               

               Cow position:
               chr7:32277782-32277649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               545-671
               

               Cow position:
               chr7:19880807-19880933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               545-674
               

               Cow position:
               chr7:64139904-64140034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               550-674
               

               Cow position:
               chr7:31224169-31224299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               551-667
               

               Cow position:
               chr7:35528960-35529077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               565-669
               

               Cow position:
               chr7:57319696-57319801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               565-674
               

               Cow position:
               chr7:40192968-40192860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               565-695
               

               Cow position:
               chr7:25445618-25445487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               566-674
               

               Cow position:
               chr7:41728160-41728051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.