Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10019G05.5 |
| Conread position: | 1-323 |
| Cow position: | chr5:32737603-32737919 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-324 |
| Cow position: | chr5:32723575-32723897 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 0 |
| Conread position: | 1-330 |
| Cow position: | chr5:32788282-32788610 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-331 |
| Cow position: | chr5:32707570-32707898 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 1-331 |
| Cow position: | chr5:32742030-32742360 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-331 |
| Cow position: | chr5:32782008-32782338 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr5:32730284-32730529 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-331 |
| Cow position: | chr5:32715254-32715581 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-331 |
| Cow position: | chr5:32751297-32751614 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 78 |
| Conread position: | 16-331 |
| Cow position: | chr5:32987857-32987542 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-325 |
| Cow position: | chr5:32795173-32795413 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 148 |
| Conread position: | 326-596 |
| Cow position: | chr5:35381775-35382046 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 329-589 |
| Cow position: | chr5:32717855-32718115 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-590 |
| Cow position: | chr5:32744776-32745036 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 329-590 |
| Cow position: | chr5:32778248-32778497 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 329-590 |
| Cow position: | chr5:32784356-32784617 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-590 |
| Cow position: | chr5:32789264-32789525 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 202 |
| Conread position: | 329-590 |
| Cow position: | chr5:32799096-32799357 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-600 |
| Cow position: | chr5:32984881-32984611 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 584-766 |
| Cow position: | chr5:32745888-32746070 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 584-766 |
| Cow position: | chr5:32791189-32791376 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 587-748 |
| Cow position: | chr5:32785481-32785642 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 139 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 587-771 |
| Cow position: | chr5:32718967-32719151 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 758-1501 |
| Cow position: | chr5:32746624-32747342 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 316 |
| Conread position: | 758-1607 |
| Cow position: | chr5:32786219-32787066 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 671 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 273 |
| Conread position: | 796-1198 |
| Cow position: | chr5:32719717-32720121 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 238 |
| Conread position: | 797-1456 |
| Cow position: | chr5:32792131-32792763 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 814-940 |
| Cow position: | chr5:32710639-32710764 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 969-1603 |
| Cow position: | chr5:32711278-32711872 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 65 |
Show alignments to all cow chromosomes.