Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10029B08.5.5 |
| Conread position: | 65-732 |
| Cow position: | chr21:39153003-39152363 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 63 |
| Conread position: | 65-732 |
| Cow position: | chr21:40604841-40605481 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 479, 85 |
| Conread position: | 65-732 |
| Cow position: | chr21:40655209-40654569 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 66 |
| Conread position: | 65-732 |
| Cow position: | chr21:40677263-40676614 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 65-732 |
| Cow position: | chr21:40705409-40704769 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 63 |
| Conread position: | 65-739 |
| Cow position: | chr21:40639740-40639084 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 85 |
| Conread position: | 95-737 |
| Cow position: | chr21:39247551-39248190 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 383 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 233-515 |
| Cow position: | chr21:39175677-39175394 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 244-739 |
| Cow position: | chr21:39199258-39198768 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 276, 42 |
| Conread position: | 249-732 |
| Cow position: | chr21:39304885-39305365 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 37 |
| Conread position: | 250-737 |
| Cow position: | chr21:38962547-38962060 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 252-732 |
| Cow position: | chr21:38910076-38909596 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 341 |
| Conread position: | 731-941 |
| Cow position: | chr21:40607405-40607612 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 731-1006 |
| Cow position: | chr21:39149955-39149683 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 731-1006 |
| Cow position: | chr21:40637247-40636972 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 731-1006 |
| Cow position: | chr21:40652739-40652467 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 731-1006 |
| Cow position: | chr21:40674986-40674714 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 107 |
| Conread position: | 731-1006 |
| Cow position: | chr21:40702935-40702663 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 993-1160 |
| Cow position: | chr21:39148563-39148399 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 993-1160 |
| Cow position: | chr21:40650871-40650707 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 993-1160 |
| Cow position: | chr21:40701539-40701375 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1002-1159 |
| Cow position: | chr21:40672640-40672483 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 143 |
| Conread position: | 1002-1163 |
| Cow position: | chr21:40626536-40626374 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 136 |
| Conread position: | 1002-1165 |
| Cow position: | chr21:40634374-40634210 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 142, 136 |
| Conread position: | 1010-1160 |
| Cow position: | chr21:40610220-40610370 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1155-1340 |
| Cow position: | chr21:39147350-39147168 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1155-1340 |
| Cow position: | chr21:40611952-40612136 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 70, 50 |
| Conread position: | 1155-1340 |
| Cow position: | chr21:40649650-40649465 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1155-1340 |
| Cow position: | chr21:40700321-40700139 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1155-1403 |
| Cow position: | chr21:40633161-40632894 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1155-1512 |
| Cow position: | chr21:40671456-40671094 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 204 |
| Conread position: | 1256-1512 |
| Cow position: | chr21:40624996-40624735 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.