Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10031B12.5.5
        

               Conread position:
               3-206
               

               Cow position:
               chr21:22049861-22049672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               208-317
               

               Cow position:
               chr21:22046042-22045933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-439
               

               Cow position:
               chr21:22044252-22044129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               444-581
               

               Cow position:
               chr21:22037868-22037731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               580-683
               

               Cow position:
               chr21:22035560-22035457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               731-831
               

               Cow position:
               chr21:22033095-22032995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               831-963
               

               Cow position:
               chr21:22031724-22031592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               122
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               936-1039
               

               Cow position:
               chr21:22029281-22029179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               1084-1188
               

               Cow position:
               chr21:22027751-22027647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1303-1524
               

               Cow position:
               chr21:22020133-22019906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               
Show alignments to all cow chromosomes.