Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10136F04.5 |
| Conread position: | 2-171 |
| Cow position: | chr1:92550850-92551010 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 2-190 |
| Cow position: | chr1:69061528-69061355 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-190 |
| Cow position: | chr1:82572954-82573137 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 4-171 |
| Cow position: | chr1:52206977-52206814 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 6-171 |
| Cow position: | chr1:77755668-77755825 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 6-176 |
| Cow position: | chr1:85519-85349 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 6-178 |
| Cow position: | chr1:45978204-45978034 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 7-171 |
| Cow position: | chr1:76780141-76780317 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 8-171 |
| Cow position: | chr1:39244278-39244442 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 8-187 |
| Cow position: | chr1:87914664-87914845 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 12-152 |
| Cow position: | chr1:54365276-54365417 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 12-171 |
| Cow position: | chr1:30042011-30041862 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 20-171 |
| Cow position: | chr1:31233064-31233218 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 22-171 |
| Cow position: | chr1:71555530-71555668 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 32-182 |
| Cow position: | chr1:19439755-19439899 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 35-169 |
| Cow position: | chr1:22070523-22070394 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 38-171 |
| Cow position: | chr1:23624423-23624292 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 38-190 |
| Cow position: | chr1:81371429-81371577 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 133, 40 |
Show alignments to all cow chromosomes.