Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10136F04.5
        

               Conread position:
               1-182
               

               Cow position:
               chr15:6523474-6523650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 80
               

               Conread position:
               4-170
               

               Cow position:
               chr15:27971814-27971981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               5-157
               

               Cow position:
               chr15:40065902-40065748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               5-190
               

               Cow position:
               chr15:44797312-44797507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               6-125
               

               Cow position:
               chr15:12048783-12048902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               6-171
               

               Cow position:
               chr15:23265744-23265580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               6-182
               

               Cow position:
               chr15:9072652-9072477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               6-185
               

               Cow position:
               chr15:11997705-11997517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               8-168
               

               Cow position:
               chr15:37470010-37470168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               21-170
               

               Cow position:
               chr15:25683630-25683487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               49-190
               

               Cow position:
               chr15:4623321-4623462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               74-171
               

               Cow position:
               chr15:35041977-35041880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.