Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10136F04.5
        

               Conread position:
               1-177
               

               Cow position:
               chr24:36551088-36551256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               4-152
               

               Cow position:
               chr24:38643890-38643745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               4-168
               

               Cow position:
               chr24:1296787-1296948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               4-171
               

               Cow position:
               chr24:36853599-36853428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               5-130
               

               Cow position:
               chr24:29515850-29515981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               6-171
               

               Cow position:
               chr24:25246307-25246141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               7-190
               

               Cow position:
               chr24:43350829-43351010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               8-169
               

               Cow position:
               chr24:19961243-19961410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               8-171
               

               Cow position:
               chr24:19627594-19627436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               30-171
               

               Cow position:
               chr24:31301417-31301553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.