Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10136F04.5
        

               Conread position:
               1-171
               

               Cow position:
               chr28:5047521-5047353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 115
               

               Conread position:
               2-171
               

               Cow position:
               chr28:22830224-22830060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               4-162
               

               Cow position:
               chr28:15349759-15349604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               4-171
               

               Cow position:
               chr28:2340833-2340671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               4-189
               

               Cow position:
               chr28:28630871-28630691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               11-171
               

               Cow position:
               chr28:22360926-22360773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               12-171
               

               Cow position:
               chr28:15914966-15915116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               15-171
               

               Cow position:
               chr28:16805185-16805346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               33-190
               

               Cow position:
               chr28:21940457-21940293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 142
               

               Conread position:
               36-182
               

               Cow position:
               chr28:6277284-6277427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               50-163
               

               Cow position:
               chr28:23390583-23390473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.