Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10136F04.5 |
| Conread position: | 1-161 |
| Cow position: | chrX:28939121-28938961 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 4-190 |
| Cow position: | chrX:4597401-4597593 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 169 |
| Conread position: | 4-190 |
| Cow position: | chrX:23253873-23254061 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 5-167 |
| Cow position: | chrX:21816583-21816421 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 5-170 |
| Cow position: | chrX:9051114-9051276 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 5-170 |
| Cow position: | chrX:12688762-12688926 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 5-173 |
| Cow position: | chrX:9910428-9910600 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 5-174 |
| Cow position: | chrX:25106533-25106365 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 6-138 |
| Cow position: | chrX:20505021-20504889 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 6-140 |
| Cow position: | chrX:24952046-24952185 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-165 |
| Cow position: | chrX:19217002-19217163 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 6-169 |
| Cow position: | chrX:8558145-8558304 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 6-170 |
| Cow position: | chrX:25453495-25453334 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 6-171 |
| Cow position: | chrX:11675385-11675223 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 7-168 |
| Cow position: | chrX:24286276-24286122 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 8-171 |
| Cow position: | chrX:956789-956639 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 19-168 |
| Cow position: | chrX:19017949-19018099 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 23-171 |
| Cow position: | chrX:18518092-18517944 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 23-191 |
| Cow position: | chrX:4631371-4631534 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.