Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10144C01.5 |
| Conread position: | 31-180 |
| Cow position: | chr11:106262-106414 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 31-181 |
| Cow position: | chr11:30216320-30216177 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 31-182 |
| Cow position: | chr11:40366580-40366732 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 31-183 |
| Cow position: | chr11:4678079-4678236 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 31-183 |
| Cow position: | chr11:6575338-6575490 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 31-183 |
| Cow position: | chr11:12167597-12167445 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 31-183 |
| Cow position: | chr11:26305346-26305198 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 31-183 |
| Cow position: | chr11:37319456-37319608 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 31-183 |
| Cow position: | chr11:37334781-37334927 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 31-183 |
| Cow position: | chr11:38679913-38680063 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 31-183 |
| Cow position: | chr11:50649259-50649107 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 31-183 |
| Cow position: | chr11:70142751-70142595 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 31-183 |
| Cow position: | chr11:70888279-70888124 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 31-183 |
| Cow position: | chr11:77178367-77178518 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 34-180 |
| Cow position: | chr11:2546066-2546213 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 35-183 |
| Cow position: | chr11:30766868-30766719 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 35-183 |
| Cow position: | chr11:66166276-66166421 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 39-183 |
| Cow position: | chr11:20991100-20990959 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 41-183 |
| Cow position: | chr11:81347824-81347963 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 42-183 |
| Cow position: | chr11:66869352-66869208 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 43-183 |
| Cow position: | chr11:79807699-79807841 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 45-183 |
| Cow position: | chr11:5292583-5292446 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 45-183 |
| Cow position: | chr11:64814010-64814149 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 12 |
Show alignments to all cow chromosomes.