Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10144C01.5 |
| Conread position: | 1-183 |
| Cow position: | chr5:12219211-12219391 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 31-183 |
| Cow position: | chr5:2441206-2441053 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 31-183 |
| Cow position: | chr5:8764370-8764523 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 31-183 |
| Cow position: | chr5:18775535-18775389 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 31-183 |
| Cow position: | chr5:21042978-21043127 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 31-183 |
| Cow position: | chr5:24888668-24888820 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 31-183 |
| Cow position: | chr5:29076035-29076189 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 31-183 |
| Cow position: | chr5:42183332-42183179 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 31-183 |
| Cow position: | chr5:42785544-42785391 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 31-183 |
| Cow position: | chr5:47619511-47619361 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 31-183 |
| Cow position: | chr5:48135738-48135885 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 31-183 |
| Cow position: | chr5:64796242-64796393 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 32-183 |
| Cow position: | chr5:18657615-18657770 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 32-183 |
| Cow position: | chr5:47991620-47991466 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 35-183 |
| Cow position: | chr5:25896335-25896189 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 41-180 |
| Cow position: | chr5:23628533-23628673 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 41-181 |
| Cow position: | chr5:47996408-47996266 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 135 |
| Conread position: | 41-183 |
| Cow position: | chr5:73480254-73480114 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 42-180 |
| Cow position: | chr5:18585075-18585214 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 49-182 |
| Cow position: | chr5:51921289-51921155 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 71-183 |
| Cow position: | chr5:17737178-17737288 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 74-183 |
| Cow position: | chr5:27995986-27996092 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.