Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10144C01.5 |
| Conread position: | 31-181 |
| Cow position: | chrX:29919821-29919668 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 31-183 |
| Cow position: | chrX:25306707-25306557 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 31-183 |
| Cow position: | chrX:32978875-32978721 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 31-183 |
| Cow position: | chrX:36090473-36090625 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 31-183 |
| Cow position: | chrX:37074984-37074839 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 31-183 |
| Cow position: | chrX:42467417-42467265 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-183 |
| Cow position: | chrX:42570633-42570489 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 32-183 |
| Cow position: | chrX:26411699-26411854 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 32-183 |
| Cow position: | chrX:30035979-30035823 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 32-183 |
| Cow position: | chrX:44117237-44117085 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 41-181 |
| Cow position: | chrX:40598621-40598766 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 41-183 |
| Cow position: | chrX:9515098-9514951 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 41-183 |
| Cow position: | chrX:12649146-12649290 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 41-200 |
| Cow position: | chrX:15267269-15267103 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 43-183 |
| Cow position: | chrX:39528494-39528634 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 45-183 |
| Cow position: | chrX:26463687-26463828 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 47-183 |
| Cow position: | chrX:28698274-28698138 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 36 |
Show alignments to all cow chromosomes.