Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10147D04.5
        

               Conread position:
               4-148
               

               Cow position:
               chr22:1046865-1046722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               4-195
               

               Cow position:
               chr22:1624543-1624367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               4-317
               

               Cow position:
               chr22:7276996-7276695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-379
               

               Cow position:
               chr22:309216-308850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               294, 24
               

               Conread position:
               4-408
               

               Cow position:
               chr22:36272987-36272583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 52
               

               Conread position:
               18-364
               

               Cow position:
               chr22:33350641-33350301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               22-417
               

               Cow position:
               chr22:27334928-27334552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               148, 34
               

               Conread position:
               30-242
               

               Cow position:
               chr22:9272793-9272585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               135, 10
               

               Conread position:
               61-245
               

               Cow position:
               chr22:34696021-34695842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.