Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10147D04.5
        

               Conread position:
               4-156
               

               Cow position:
               chr23:810607-810457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               4-269
               

               Cow position:
               chr23:7749644-7749389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               234, 52
               

               Conread position:
               5-398
               

               Cow position:
               chr23:16617365-16617750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 50
               

               Conread position:
               6-403
               

               Cow position:
               chr23:22879686-22880086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 50
               

               Conread position:
               14-667
               

               Cow position:
               chr23:16482089-16482738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               677
               

               Alignm identity:
               431
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               219, 38
               

               Conread position:
               18-316
               

               Cow position:
               chr23:3491033-3491340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               38-407
               

               Cow position:
               chr23:29153898-29154265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               270, 7
               
Show alignments to all cow chromosomes.