Cow genome map


           Conread name:
           Ss1.1-Liv1-LVRM10147D04.5
        

               Conread position:
               1-406
               

               Cow position:
               chr29:32640290-32639905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 38
               

               Conread position:
               4-165
               

               Cow position:
               chr29:5184932-5184772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               4-195
               

               Cow position:
               chr29:104073-103882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               166, 52
               

               Conread position:
               4-402
               

               Cow position:
               chr29:45464287-45464687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 52
               

               Conread position:
               5-141
               

               Cow position:
               chr29:6874369-6874506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               6-262
               

               Cow position:
               chr29:1714607-1714356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               13-135
               

               Cow position:
               chr29:32890690-32890569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               14-269
               

               Cow position:
               chr29:30811037-30810787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               16-279
               

               Cow position:
               chr29:6470979-6470720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               94-374
               

               Cow position:
               chr29:131028-130745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               224, 14
               

               Conread position:
               487-720
               

               Cow position:
               chr29:34752736-34752971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               488-648
               

               Cow position:
               chr29:45464859-45465029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 129
               
Show alignments to all cow chromosomes.