Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10147D04.5 |
| Conread position: | 2-144 |
| Cow position: | chr3:52865347-52865488 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-356 |
| Cow position: | chr3:80871151-80870796 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 3-360 |
| Cow position: | chr3:58208676-58209020 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 342, 33 |
| Conread position: | 4-143 |
| Cow position: | chr3:2909674-2909813 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 4-143 |
| Cow position: | chr3:39326106-39325969 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-170 |
| Cow position: | chr3:19801827-19801665 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-179 |
| Cow position: | chr3:21945996-21946170 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-250 |
| Cow position: | chr3:64358763-64359008 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-256 |
| Cow position: | chr3:50011819-50011573 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-258 |
| Cow position: | chr3:48329824-48329575 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-284 |
| Cow position: | chr3:52861287-52861007 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 4-373 |
| Cow position: | chr3:18357463-18357832 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 4-401 |
| Cow position: | chr3:15177725-15177329 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 52 |
| Conread position: | 4-403 |
| Cow position: | chr3:54865308-54865699 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 4-407 |
| Cow position: | chr3:36099305-36099707 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 53 |
| Conread position: | 4-408 |
| Cow position: | chr3:26948740-26948330 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 4-409 |
| Cow position: | chr3:19692679-19693079 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 221, 21 |
| Conread position: | 5-406 |
| Cow position: | chr3:32843023-32843418 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 51 |
| Conread position: | 6-404 |
| Cow position: | chr3:14755093-14755490 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 50 |
| Conread position: | 6-441 |
| Cow position: | chr3:60210732-60211167 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 234, 50 |
| Conread position: | 7-241 |
| Cow position: | chr3:27905866-27906097 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 164, 49 |
| Conread position: | 7-284 |
| Cow position: | chr3:30929084-30928820 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 14-408 |
| Cow position: | chr3:34093996-34094384 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 18-375 |
| Cow position: | chr3:83700737-83701095 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 49-359 |
| Cow position: | chr3:14587695-14587383 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 52-256 |
| Cow position: | chr3:3979764-3979559 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 74-402 |
| Cow position: | chr3:17751579-17751259 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 234, 37 |
| Conread position: | 213-404 |
| Cow position: | chr3:2125351-2125163 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 493-720 |
| Cow position: | chr3:26948177-26947952 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 43 |
Show alignments to all cow chromosomes.