Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10147D04.5 |
| Conread position: | 1-143 |
| Cow position: | chr5:46659010-46658870 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 4-162 |
| Cow position: | chr5:41963623-41963780 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 4-208 |
| Cow position: | chr5:7503083-7503279 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-245 |
| Cow position: | chr5:23688172-23688412 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-248 |
| Cow position: | chr5:51319948-51320188 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 189, 32 |
| Conread position: | 4-253 |
| Cow position: | chr5:27000511-27000266 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-262 |
| Cow position: | chr5:34167371-34167124 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-373 |
| Cow position: | chr5:26070530-26070881 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 292, 50 |
| Conread position: | 4-399 |
| Cow position: | chr5:27060772-27061152 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 265, 50 |
| Conread position: | 4-406 |
| Cow position: | chr5:27488332-27487950 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 324, 52 |
| Conread position: | 4-408 |
| Cow position: | chr5:26090550-26090947 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 49 |
| Conread position: | 4-408 |
| Cow position: | chr5:58747197-58746810 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 52 |
| Conread position: | 6-432 |
| Cow position: | chr5:24151382-24150954 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 50 |
| Conread position: | 7-365 |
| Cow position: | chr5:23227564-23227213 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 48 |
| Conread position: | 31-181 |
| Cow position: | chr5:26616889-26616736 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 39-358 |
| Cow position: | chr5:52433119-52432789 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 56-250 |
| Cow position: | chr5:46631146-46631337 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 58-242 |
| Cow position: | chr5:23756309-23756489 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 62-246 |
| Cow position: | chr5:6519106-6518924 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 72-256 |
| Cow position: | chr5:28044675-28044847 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 106-385 |
| Cow position: | chr5:27683507-27683793 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 181 |
| Conread position: | 111-401 |
| Cow position: | chr5:76124658-76124944 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 155-403 |
| Cow position: | chr5:25001728-25001984 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 526-720 |
| Cow position: | chr5:26616327-26616138 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.