Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10147D04.5 |
| Conread position: | 1-408 |
| Cow position: | chrX:30369699-30370089 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 48 |
| Conread position: | 2-152 |
| Cow position: | chrX:31372241-31372092 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 4-147 |
| Cow position: | chrX:31034979-31034837 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-163 |
| Cow position: | chrX:12974380-12974538 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-273 |
| Cow position: | chrX:22131415-22131683 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-364 |
| Cow position: | chrX:19185655-19186019 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 301, 24 |
| Conread position: | 4-381 |
| Cow position: | chrX:17669122-17669485 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 53 |
| Conread position: | 4-401 |
| Cow position: | chrX:24376649-24376254 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 4-402 |
| Cow position: | chrX:28549183-28548799 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 166, 52 |
| Conread position: | 7-407 |
| Cow position: | chrX:13051965-13051582 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 49 |
| Conread position: | 8-409 |
| Cow position: | chrX:12998298-12998667 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 14-334 |
| Cow position: | chrX:21270893-21271217 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 15-364 |
| Cow position: | chrX:31079800-31079459 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 216, 20 |
| Conread position: | 40-441 |
| Cow position: | chrX:18532228-18531823 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 53-419 |
| Cow position: | chrX:2142552-2142182 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 56-354 |
| Cow position: | chrX:20699170-20699471 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 188, 146 |
| Conread position: | 56-380 |
| Cow position: | chrX:34987897-34987574 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 196 |
Show alignments to all cow chromosomes.