Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10153D11.5 |
| Conread position: | 138-348 |
| Cow position: | chr18:21318423-21318213 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-348 |
| Cow position: | chr18:21353026-21352816 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-524 |
| Cow position: | chr18:21349428-21349242 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 159, 165 |
| Conread position: | 338-524 |
| Cow position: | chr18:24112681-24112495 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 159, 165 |
| Conread position: | 491-625 |
| Cow position: | chr18:21346420-21346286 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 124 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-625 |
| Cow position: | chr18:24110231-24110097 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 124 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-625 |
| Cow position: | chr18:28193549-28193683 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 622-841 |
| Cow position: | chr18:28193765-28193984 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 174, 183 |
| Conread position: | 623-797 |
| Cow position: | chr18:21345175-21345002 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 623-797 |
| Cow position: | chr18:24108999-24108826 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 779-884 |
| Cow position: | chr18:21343317-21343212 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 779-884 |
| Cow position: | chr18:24106879-24106774 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 883-989 |
| Cow position: | chr18:21340364-21340258 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 883-989 |
| Cow position: | chr18:24104970-24104864 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1027-1165 |
| Cow position: | chr18:24100831-24100693 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1027-1173 |
| Cow position: | chr18:21335799-21335653 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 128 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1253-1401 |
| Cow position: | chr18:21333330-21333182 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 132 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1253-1401 |
| Cow position: | chr18:24098361-24098213 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 132 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1397-1539 |
| Cow position: | chr18:21332486-21332344 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 127 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1397-1540 |
| Cow position: | chr18:24093583-24093440 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1603-1980 |
| Cow position: | chr18:21330740-21330381 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 197 |
| Conread position: | 1603-1980 |
| Cow position: | chr18:24092183-24091824 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 197 |
Show alignments to all cow chromosomes.