• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Liv1-LVRM1B080021.5
        

               
Conread position:
               
440-665
               

               
Cow position:
               
chr18:29586263-29586045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
465-667
               

               
Cow position:
               
chr18:54167277-54167072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
473-670
               

               
Cow position:
               
chr18:36135264-36135066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
478-667
               

               
Cow position:
               
chr18:14047750-14047936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
481-654
               

               
Cow position:
               
chr18:51653977-51654151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
481-658
               

               
Cow position:
               
chr18:45978760-45978936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
488-670
               

               
Cow position:
               
chr18:28928215-28928034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
491-654
               

               
Cow position:
               
chr18:603071-602908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
491-670
               

               
Cow position:
               
chr18:35293509-35293688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
171, 96
               

               
Conread position:
               
492-637
               

               
Cow position:
               
chr18:42080627-42080488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
492-667
               

               
Cow position:
               
chr18:15485808-15485633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
492-670
               

               
Cow position:
               
chr18:5076787-5076612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
494-637
               

               
Cow position:
               
chr18:21303898-21304041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-637
               

               
Cow position:
               
chr18:37334194-37334337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
494-637
               

               
Cow position:
               
chr18:43472994-43473136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
494-645
               

               
Cow position:
               
chr18:7699390-7699243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
494-648
               

               
Cow position:
               
chr18:51459445-51459295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
494-649
               

               
Cow position:
               
chr18:4889908-4890064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
494-649
               

               
Cow position:
               
chr18:26243062-26242908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
494-649
               

               
Cow position:
               
chr18:52574497-52574652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-650
               

               
Cow position:
               
chr18:10113405-10113560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
494-652
               

               
Cow position:
               
chr18:42628760-42628918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:6866623-6866783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:10221288-10221134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:10292127-10292287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:11271603-11271447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:11869883-11870043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:13270306-13270466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:15911514-15911673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:16463250-16463094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:18215617-18215457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 131
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:19461676-19461836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:23688568-23688728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:24037450-24037290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:24619825-24619979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:29071817-29071973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:29079133-29079293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:30607092-30607252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:32164535-32164375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:42609280-42609120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:47745149-47745309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:50093048-50092888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:51690193-51690353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:51698036-51698196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:52629862-52629702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr18:54047275-54047435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-655
               

               
Cow position:
               
chr18:20151003-20151160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
494-656
               

               
Cow position:
               
chr18:5569928-5570085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
494-663
               

               
Cow position:
               
chr18:51272740-51272571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 157
               

               
Conread position:
               
494-663
               

               
Cow position:
               
chr18:51465101-51464930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
494-663
               

               
Cow position:
               
chr18:51610377-51610548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr18:15858559-15858731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr18:35013253-35013082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr18:36477177-36477345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr18:43464376-43464202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr18:45905477-45905305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:1062321-1062144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 111
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:2439658-2439482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:2853391-2853216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:14127890-14127715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:16857181-16857357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:17335345-17335169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:19463066-19462890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:21580158-21579982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:26335765-26335592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:28084443-28084619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:29797689-29797513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:30035333-30035159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:31139148-31139321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:33850925-33851101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:36648795-36648966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:37733085-37733261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:51602269-51602093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:55436738-55436562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr18:55554647-55554823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr18:25923767-25923945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 92
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr18:44261464-44261637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr18:55700123-55699947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
168, 156
               

               
Conread position:
               
494-672
               

               
Cow position:
               
chr18:33157932-33158110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-672
               

               
Cow position:
               
chr18:43129484-43129657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr18:6104005-6103832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr18:26845476-26845654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr18:36771135-36770960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr18:48548219-48548399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
494-680
               

               
Cow position:
               
chr18:53872288-53872475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
495-618
               

               
Cow position:
               
chr18:4954547-4954670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-619
               

               
Cow position:
               
chr18:22412788-22412912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-619
               

               
Cow position:
               
chr18:36908463-36908339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-619
               

               
Cow position:
               
chr18:36912992-36912868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-649
               

               
Cow position:
               
chr18:46869548-46869699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr18:4949559-4949710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr18:29059424-29059269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr18:47985288-47985442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr18:16640845-16641004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr18:40195509-40195667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr18:42466947-42466791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr18:51345685-51345844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr18:51580388-51580229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-655
               

               
Cow position:
               
chr18:1022625-1022465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-655
               

               
Cow position:
               
chr18:15172245-15172404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
495-655
               

               
Cow position:
               
chr18:33406705-33406864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:6733568-6733405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:14419374-14419537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:26305670-26305832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:27990154-27990317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:37509359-37509522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:38158145-38157982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:41837693-41837530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:43430403-43430563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr18:54033105-54033268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-664
               

               
Cow position:
               
chr18:29240718-29240885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
495-665
               

               
Cow position:
               
chr18:7049982-7050152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-665
               

               
Cow position:
               
chr18:40484397-40484566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr18:16025261-16025088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:1145154-1144979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:5536369-5536545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:7953041-7953216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:16226619-16226794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:24219295-24219120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:28968892-28968717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:32210415-32210240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
124, 128
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:36776673-36776848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:51484985-51485159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:52656191-52656366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr18:54065677-54065503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr18:12269550-12269724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
495-672
               

               
Cow position:
               
chr18:17323778-17323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
495-673
               

               
Cow position:
               
chr18:3149341-3149151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
495-675
               

               
Cow position:
               
chr18:36187996-36187815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
495-676
               

               
Cow position:
               
chr18:16094282-16094464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
495-676
               

               
Cow position:
               
chr18:29863207-29863025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
495-676
               

               
Cow position:
               
chr18:39002727-39002553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
496-651
               

               
Cow position:
               
chr18:36223837-36223987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
496-652
               

               
Cow position:
               
chr18:35057423-35057579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-654
               

               
Cow position:
               
chr18:51663573-51663730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
496-658
               

               
Cow position:
               
chr18:23701405-23701243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr18:17670571-17670402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr18:23716266-23716093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr18:16173215-16173041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr18:25354919-25355093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 124
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr18:31996333-31996506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr18:33607629-33607799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr18:33522617-33522791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr18:21199705-21199541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
497-667
               

               
Cow position:
               
chr18:13508670-13508499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
497-667
               

               
Cow position:
               
chr18:23659496-23659326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 127
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:3190143-3190316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:7358819-7358989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:17943911-17944082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:23802422-23802595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:25972669-25972494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:30844507-30844334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-671
               

               
Cow position:
               
chr18:7649051-7649224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
497-671
               

               
Cow position:
               
chr18:45980895-45981069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr18:7946103-7946278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr18:28930039-28929864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
160, 120
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr18:32122284-32122109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-676
               

               
Cow position:
               
chr18:36512033-36512210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
170, 100
               

               
Conread position:
               
501-675
               

               
Cow position:
               
chr18:40342444-40342270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 48
               

               
Conread position:
               
508-667
               

               
Cow position:
               
chr18:37692870-37692716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
509-654
               

               
Cow position:
               
chr18:8965704-8965847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
509-667
               

               
Cow position:
               
chr18:39494199-39494355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
509-670
               

               
Cow position:
               
chr18:27995090-27995251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
511-654
               

               
Cow position:
               
chr18:33617009-33616866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
511-670
               

               
Cow position:
               
chr18:15688415-15688574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-651
               

               
Cow position:
               
chr18:23473431-23473294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
516-671
               

               
Cow position:
               
chr18:51487491-51487335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
517-667
               

               
Cow position:
               
chr18:27457664-27457514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
517-667
               

               
Cow position:
               
chr18:31564052-31563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
523-647
               

               
Cow position:
               
chr18:16135239-16135117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
524-670
               

               
Cow position:
               
chr18:27193929-27194075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
526-670
               

               
Cow position:
               
chr18:45614206-45614349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
527-670
               

               
Cow position:
               
chr18:27833997-27833854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
527-672
               

               
Cow position:
               
chr18:38342109-38341962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
528-670
               

               
Cow position:
               
chr18:29946880-29947023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
528-676
               

               
Cow position:
               
chr18:12241252-12241395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
529-672
               

               
Cow position:
               
chr18:4369916-4369773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-665
               

               
Cow position:
               
chr18:6425550-6425420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
539-670
               

               
Cow position:
               
chr18:42746664-42746795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
564-764
               

               
Cow position:
               
chr18:6091432-6091231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
137, 148
               

               
Conread position:
               
731-1221
               

               
Cow position:
               
chr18:80923-81404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
769-1255
               

               
Cow position:
               
chr18:42628906-42629386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
774-1022
               

               
Cow position:
               
chr18:27529544-27529791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
774-1202
               

               
Cow position:
               
chr18:2853237-2852818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
779-1236
               

               
Cow position:
               
chr18:54059302-54058836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
784-1212
               

               
Cow position:
               
chr18:37612091-37611664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
785-1252
               

               
Cow position:
               
chr18:23617433-23616980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
785-1254
               

               
Cow position:
               
chr18:16390668-16390204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
785-1255
               

               
Cow position:
               
chr18:17323937-17324388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
786-979
               

               
Cow position:
               
chr18:16437652-16437836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
786-980
               

               
Cow position:
               
chr18:15324505-15324313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
786-1042
               

               
Cow position:
               
chr18:7964118-7964368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
786-1142
               

               
Cow position:
               
chr18:16226785-16227136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
786-1142
               

               
Cow position:
               
chr18:24965372-24965719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 43
               

               
Conread position:
               
786-1246
               

               
Cow position:
               
chr18:33509723-33509279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
786-1248
               

               
Cow position:
               
chr18:33272179-33272614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
786-1248
               

               
Cow position:
               
chr18:41238094-41238540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
786-1253
               

               
Cow position:
               
chr18:1955308-1954851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
786-1253
               

               
Cow position:
               
chr18:33501420-33500971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
786-1254
               

               
Cow position:
               
chr18:28209611-28209155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
786-1255
               

               
Cow position:
               
chr18:31587461-31587014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 31
               

               
Conread position:
               
787-1126
               

               
Cow position:
               
chr18:14419540-14419877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
788-1042
               

               
Cow position:
               
chr18:41837526-41837275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1109
               

               
Cow position:
               
chr18:37509526-37509840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1241
               

               
Cow position:
               
chr18:38157978-38157544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr18:6733401-6732951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr18:16173049-16172596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr18:35637381-35637835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
789-932
               

               
Cow position:
               
chr18:4350240-4350381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
789-933
               

               
Cow position:
               
chr18:21579989-21579847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-976
               

               
Cow position:
               
chr18:40651868-40652053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-983
               

               
Cow position:
               
chr18:28928041-28927850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
789-1070
               

               
Cow position:
               
chr18:36135073-36134795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1074
               

               
Cow position:
               
chr18:54047444-54047726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1098
               

               
Cow position:
               
chr18:36183836-36183530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1113
               

               
Cow position:
               
chr18:7054776-7055097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1114
               

               
Cow position:
               
chr18:30607261-30607583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1114
               

               
Cow position:
               
chr18:54366250-54365929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
789-1117
               

               
Cow position:
               
chr18:54119179-54118855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1119
               

               
Cow position:
               
chr18:15911682-15912020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1133
               

               
Cow position:
               
chr18:40721897-40722227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
789-1142
               

               
Cow position:
               
chr18:17742062-17742413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1142
               

               
Cow position:
               
chr18:43473153-43473502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
789-1155
               

               
Cow position:
               
chr18:52656359-52656725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
789-1197
               

               
Cow position:
               
chr18:47745318-47745703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1207
               

               
Cow position:
               
chr18:16641013-16641421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
789-1207
               

               
Cow position:
               
chr18:55022365-55022775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1216
               

               
Cow position:
               
chr18:12249242-12249665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
789-1216
               

               
Cow position:
               
chr18:30844341-30843924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1221
               

               
Cow position:
               
chr18:26242894-26242472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1222
               

               
Cow position:
               
chr18:24619988-24620402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1246
               

               
Cow position:
               
chr18:19356072-19356536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1246
               

               
Cow position:
               
chr18:32210247-32209792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
789-1247
               

               
Cow position:
               
chr18:16082054-16082500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
789-1247
               

               
Cow position:
               
chr18:39002573-39002128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
789-1247
               

               
Cow position:
               
chr18:51459280-51458831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:3805154-3805597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:13270475-13270917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:14127722-14127275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:35443812-35443362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:51345853-51346303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr18:54065510-54065065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr18:10292296-10292746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr18:16463085-16462637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr18:37733254-37733709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr18:52574666-52575121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1252
               

               
Cow position:
               
chr18:51698205-51698657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
789-1254
               

               
Cow position:
               
chr18:25923936-25924397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
789-1254
               

               
Cow position:
               
chr18:51485152-51485609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:602899-602444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:3190309-3190766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:11271438-11270983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:16857350-16857807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:18215448-18215000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:19461845-19462302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:23802588-23803033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:24037281-24036829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:25355086-25355537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:26568145-26568602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:26883285-26883744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:27833861-27833404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:27995244-27995701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:28968724-28968267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:29071982-29072438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:29079302-29079759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:31139314-31139771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:33616857-33616400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:40059241-40059698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:42080453-42079977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:42425138-42425594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:42609111-42608653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:42746800-42747262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:43430568-43431020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 22
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:50092879-50092426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:51580220-51579763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:52629693-52629236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr18:55436569-55436112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
790-1046
               

               
Cow position:
               
chr18:26844532-26844281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
790-1054
               

               
Cow position:
               
chr18:19310717-19310975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1063
               

               
Cow position:
               
chr18:52698193-52698459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
790-1087
               

               
Cow position:
               
chr18:6103848-6103560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
790-1108
               

               
Cow position:
               
chr18:30716816-30716511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
790-1154
               

               
Cow position:
               
chr18:27194069-27194435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1161
               

               
Cow position:
               
chr18:36133320-36133688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
790-1179
               

               
Cow position:
               
chr18:45614345-45614728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
790-1185
               

               
Cow position:
               
chr18:39279765-39279390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
790-1196
               

               
Cow position:
               
chr18:5570089-5570489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1198
               

               
Cow position:
               
chr18:16471644-16471248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
790-1222
               

               
Cow position:
               
chr18:5076618-5076189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
790-1236
               

               
Cow position:
               
chr18:54629591-54629136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
790-1240
               

               
Cow position:
               
chr18:23618845-23619284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
790-1242
               

               
Cow position:
               
chr18:11778887-11779327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
790-1248
               

               
Cow position:
               
chr18:51602099-51601652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1248
               

               
Cow position:
               
chr18:55001546-55001105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
790-1251
               

               
Cow position:
               
chr18:30386439-30385986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1251
               

               
Cow position:
               
chr18:40195677-40196129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
790-1252
               

               
Cow position:
               
chr18:25847797-25847338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 13
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:5536539-5536992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:7649217-7649667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:17944076-17944537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:27800315-27799857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:27990323-27990779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:30248896-30248453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:30876707-30876250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr18:55554817-55555272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
791-1012
               

               
Cow position:
               
chr18:8388821-8389037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
791-1105
               

               
Cow position:
               
chr18:183345-183657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
791-1255
               

               
Cow position:
               
chr18:36336490-36336049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
791-1255
               

               
Cow position:
               
chr18:50114720-50114266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
792-1074
               

               
Cow position:
               
chr18:7050154-7050431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
792-1074
               

               
Cow position:
               
chr18:42623147-42622869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
792-1201
               

               
Cow position:
               
chr18:40484568-40484964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
792-1255
               

               
Cow position:
               
chr18:29586043-29585590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
793-986
               

               
Cow position:
               
chr18:12241382-12241572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
793-1063
               

               
Cow position:
               
chr18:30186905-30186638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
793-1108
               

               
Cow position:
               
chr18:44180053-44179736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
793-1121
               

               
Cow position:
               
chr18:21198169-21197859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
793-1142
               

               
Cow position:
               
chr18:2609494-2609148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
793-1142
               

               
Cow position:
               
chr18:33607803-33608148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
793-1247
               

               
Cow position:
               
chr18:28929876-28929431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
793-1248
               

               
Cow position:
               
chr18:4858665-4858226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
793-1252
               

               
Cow position:
               
chr18:9365113-9365562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
793-1254
               

               
Cow position:
               
chr18:23079599-23079141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:12269726-12270167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:17454453-17454003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:22275815-22275367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:26845641-26846093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 64
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:28530886-28530426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:31563373-31562915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr18:36233298-36232856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 9
               

               
Conread position:
               
794-979
               

               
Cow position:
               
chr18:37692714-37692532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
794-1247
               

               
Cow position:
               
chr18:30231999-30231551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
794-1248
               

               
Cow position:
               
chr18:8988568-8989017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
794-1255
               

               
Cow position:
               
chr18:29059246-29058817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
794-1255
               

               
Cow position:
               
chr18:35013078-35012631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
794-1255
               

               
Cow position:
               
chr18:36648960-36649402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
795-1034
               

               
Cow position:
               
chr18:21175378-21175615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
795-1042
               

               
Cow position:
               
chr18:47800284-47800526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1042
               

               
Cow position:
               
chr18:47814249-47814008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1082
               

               
Cow position:
               
chr18:34662471-34662747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1086
               

               
Cow position:
               
chr18:5608169-5608458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1095
               

               
Cow position:
               
chr18:29078668-29078967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
795-1098
               

               
Cow position:
               
chr18:28801275-28800977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
795-1104
               

               
Cow position:
               
chr18:38794543-38794836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
795-1108
               

               
Cow position:
               
chr18:47518232-47517918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
795-1113
               

               
Cow position:
               
chr18:10113567-10113875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1126
               

               
Cow position:
               
chr18:29797512-29797184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1142
               

               
Cow position:
               
chr18:11655704-11656042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1155
               

               
Cow position:
               
chr18:7358989-7359344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
795-1193
               

               
Cow position:
               
chr18:43112830-43112442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
795-1211
               

               
Cow position:
               
chr18:51247235-51247634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
172, 41
               

               
Conread position:
               
795-1246
               

               
Cow position:
               
chr18:29030873-29030432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr18:33522804-33523247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1251
               

               
Cow position:
               
chr18:871026-871479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
795-1251
               

               
Cow position:
               
chr18:17228874-17228431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
795-1252
               

               
Cow position:
               
chr18:51331401-51331848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1253
               

               
Cow position:
               
chr18:14121302-14121755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1253
               

               
Cow position:
               
chr18:19633918-19634375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
795-1253
               

               
Cow position:
               
chr18:32908130-32908575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 38
               

               
Conread position:
               
795-1253
               

               
Cow position:
               
chr18:43464198-43463746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
795-1253
               

               
Cow position:
               
chr18:43563451-43563901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:601932-601495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 23
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:7951448-7951883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:13508499-13508051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
150, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:17335169-17334720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:23063001-23062528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:23659321-23658884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:23682337-23681872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:25003641-25003202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:36776876-36777327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:45981067-45981515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 28
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr18:50789303-50789747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1266
               

               
Cow position:
               
chr18:6460568-6461026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
796-1051
               

               
Cow position:
               
chr18:27466743-27466997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
796-1204
               

               
Cow position:
               
chr18:38087298-38086897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
796-1216
               

               
Cow position:
               
chr18:52460844-52460428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
796-1236
               

               
Cow position:
               
chr18:29387461-29387887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
796-1246
               

               
Cow position:
               
chr18:28931546-28931973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
796-1248
               

               
Cow position:
               
chr18:48548389-48548824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
796-1248
               

               
Cow position:
               
chr18:55699943-55699501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
796-1253
               

               
Cow position:
               
chr18:23716065-23715612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
796-1254
               

               
Cow position:
               
chr18:29013800-29013337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
796-1255
               

               
Cow position:
               
chr18:16094454-16094898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
796-1255
               

               
Cow position:
               
chr18:29863035-29862587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
796-1255
               

               
Cow position:
               
chr18:36512200-36512650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
796-1262
               

               
Cow position:
               
chr18:51272564-51272108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
797-1232
               

               
Cow position:
               
chr18:4954719-4955146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
186, 34
               

               
Conread position:
               
797-1244
               

               
Cow position:
               
chr18:39455611-39456050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
797-1248
               

               
Cow position:
               
chr18:7965508-7965939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
798-1013
               

               
Cow position:
               
chr18:52933405-52933613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
798-1024
               

               
Cow position:
               
chr18:699458-699238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
798-1069
               

               
Cow position:
               
chr18:10896746-10897012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
798-1074
               

               
Cow position:
               
chr18:8884679-8884938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
798-1074
               

               
Cow position:
               
chr18:23132119-23131847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1104
               

               
Cow position:
               
chr18:45663174-45663466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
798-1110
               

               
Cow position:
               
chr18:225857-225557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
798-1127
               

               
Cow position:
               
chr18:30035135-30034810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
798-1142
               

               
Cow position:
               
chr18:4369772-4369445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
798-1142
               

               
Cow position:
               
chr18:46881803-46881475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1156
               

               
Cow position:
               
chr18:34052725-34052380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1163
               

               
Cow position:
               
chr18:30846492-30846141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1180
               

               
Cow position:
               
chr18:19683561-19683175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
798-1207
               

               
Cow position:
               
chr18:10516412-10516808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
798-1214
               

               
Cow position:
               
chr18:19438480-19438882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
798-1217
               

               
Cow position:
               
chr18:32122108-32121700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1225
               

               
Cow position:
               
chr18:14479702-14480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
798-1233
               

               
Cow position:
               
chr18:40840748-40840316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
798-1234
               

               
Cow position:
               
chr18:28084836-28085265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1246
               

               
Cow position:
               
chr18:52692712-52693140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1247
               

               
Cow position:
               
chr18:52609971-52610419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
798-1252
               

               
Cow position:
               
chr18:51679633-51679201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
292, 25
               

               
Conread position:
               
798-1253
               

               
Cow position:
               
chr18:16135083-16134635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr18:949767-950222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr18:23044047-23044492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr18:26305847-26306291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr18:36477360-36477827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr18:42060267-42060705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
799-1062
               

               
Cow position:
               
chr18:21574237-21574484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
799-1236
               

               
Cow position:
               
chr18:35277824-35278253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
799-1253
               

               
Cow position:
               
chr18:44486346-44486804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
799-1255
               

               
Cow position:
               
chr18:1144974-1144538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
800-1128
               

               
Cow position:
               
chr18:23466340-23466024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
800-1254
               

               
Cow position:
               
chr18:22385683-22386131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
801-1248
               

               
Cow position:
               
chr18:26822175-26822611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
802-963
               

               
Cow position:
               
chr18:21107207-21107049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
803-977
               

               
Cow position:
               
chr18:48300885-48300718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
803-1043
               

               
Cow position:
               
chr18:21206959-21207195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
803-1107
               

               
Cow position:
               
chr18:20151171-20151475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
803-1108
               

               
Cow position:
               
chr18:52563754-52564053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
803-1114
               

               
Cow position:
               
chr18:19401638-19401334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
803-1133
               

               
Cow position:
               
chr18:17670391-17670065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
803-1155
               

               
Cow position:
               
chr18:31712235-31711883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
803-1250
               

               
Cow position:
               
chr18:51692240-51691798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
803-1255
               

               
Cow position:
               
chr18:25006348-25005906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
803-1255
               

               
Cow position:
               
chr18:36224014-36224456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
804-1017
               

               
Cow position:
               
chr18:3150978-3150771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
804-1255
               

               
Cow position:
               
chr18:27540003-27540444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
805-1138
               

               
Cow position:
               
chr18:33406880-33407203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 18
               

               
Conread position:
               
805-1247
               

               
Cow position:
               
chr18:30567561-30567132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 12
               

               
Conread position:
               
805-1251
               

               
Cow position:
               
chr18:11243023-11243468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
805-1255
               

               
Cow position:
               
chr18:10574289-10574728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
806-1094
               

               
Cow position:
               
chr18:40342265-40341980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
806-1155
               

               
Cow position:
               
chr18:24678460-24678807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
806-1155
               

               
Cow position:
               
chr18:33851125-33851467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
806-1216
               

               
Cow position:
               
chr18:18855435-18855854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
806-1246
               

               
Cow position:
               
chr18:37492587-37493042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 183
               

               
Conread position:
               
806-1248
               

               
Cow position:
               
chr18:43066473-43066906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
806-1248
               

               
Cow position:
               
chr18:43075497-43075930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
806-1252
               

               
Cow position:
               
chr18:51713480-51713037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
806-1253
               

               
Cow position:
               
chr18:24293102-24293532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
807-1127
               

               
Cow position:
               
chr18:42242757-42242439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
807-1198
               

               
Cow position:
               
chr18:25972494-25972107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
807-1231
               

               
Cow position:
               
chr18:43637976-43638400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
807-1251
               

               
Cow position:
               
chr18:12200790-12200357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
807-1255
               

               
Cow position:
               
chr18:35057598-35058019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 22
               

               
Conread position:
               
807-1255
               

               
Cow position:
               
chr18:42966074-42966513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
808-1063
               

               
Cow position:
               
chr18:33792119-33792371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
808-1091
               

               
Cow position:
               
chr18:41498443-41498714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
808-1161
               

               
Cow position:
               
chr18:36122273-36121923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
808-1248
               

               
Cow position:
               
chr18:21768013-21767576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
808-1255
               

               
Cow position:
               
chr18:89716-90136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
809-1073
               

               
Cow position:
               
chr18:36358523-36358265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
809-1135
               

               
Cow position:
               
chr18:1658986-1658677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
809-1233
               

               
Cow position:
               
chr18:39494358-39494763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 14
               

               
Conread position:
               
809-1248
               

               
Cow position:
               
chr18:42731-42305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
809-1248
               

               
Cow position:
               
chr18:49781699-49781272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
809-1254
               

               
Cow position:
               
chr18:37758818-37758382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
809-1255
               

               
Cow position:
               
chr18:22790824-22790395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
809-1255
               

               
Cow position:
               
chr18:35368367-35367936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
809-1255
               

               
Cow position:
               
chr18:54027179-54027617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
810-1141
               

               
Cow position:
               
chr18:54167067-54166741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
811-1158
               

               
Cow position:
               
chr18:11232762-11233094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
811-1195
               

               
Cow position:
               
chr18:55396060-55396453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
811-1239
               

               
Cow position:
               
chr18:7076013-7076427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
811-1246
               

               
Cow position:
               
chr18:16045754-16045334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:6878386-6877954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:29223887-29224323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:30676902-30677336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:36907937-36907499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:36912463-36912025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
811-1255
               

               
Cow position:
               
chr18:56482855-56482417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
812-1198
               

               
Cow position:
               
chr18:21304094-21304476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
812-1248
               

               
Cow position:
               
chr18:40693815-40694252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
813-1081
               

               
Cow position:
               
chr18:56298473-56298215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
813-1108
               

               
Cow position:
               
chr18:47048373-47048078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
813-1231
               

               
Cow position:
               
chr18:43466389-43466779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
813-1248
               

               
Cow position:
               
chr18:18247699-18248130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
813-1253
               

               
Cow position:
               
chr18:17341527-17341965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 20
               

               
Conread position:
               
814-979
               

               
Cow position:
               
chr18:56310149-56309987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
814-1255
               

               
Cow position:
               
chr18:47184056-47183610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
815-997
               

               
Cow position:
               
chr18:29240909-29241092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
816-977
               

               
Cow position:
               
chr18:55784129-55783970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
817-1255
               

               
Cow position:
               
chr18:4890102-4890517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
299, 16
               

               
Conread position:
               
817-1255
               

               
Cow position:
               
chr18:6829817-6829388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
820-1255
               

               
Cow position:
               
chr18:2864956-2864532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
822-1251
               

               
Cow position:
               
chr18:14886882-14886466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
824-1255
               

               
Cow position:
               
chr18:21938598-21939030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
833-1016
               

               
Cow position:
               
chr18:5451735-5451910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
833-1106
               

               
Cow position:
               
chr18:27077912-27078180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
833-1172
               

               
Cow position:
               
chr18:38341933-38341601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
833-1173
               

               
Cow position:
               
chr18:2295584-2295247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
833-1214
               

               
Cow position:
               
chr18:16152064-16152439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
833-1246
               

               
Cow position:
               
chr18:54991272-54991675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 56
               
UCSC Genome Browser

               
Conread position:
               
833-1248
               

               
Cow position:
               
chr18:19159694-19159296 (view  custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 25
               
UCSC Genome Browser

               
               
               
Conread position:
833-1248

               
               
               
Cow position:
chr18:27102589-27102990 (view  custom track)

               
               
               
Alignm length:
417

               
               
               
Alignm identity:
292

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
282, 24
UCSC Genome Browser

               
               
               
Conread position:
833-1248

               
               
               
Cow position:
chr18:28658644-28658240 (view  custom track)

               
               
               
Alignm length:
418

               
               
               
Alignm identity:
298

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
177, 24

               
               
               Conread position:833-1248
               
               
               Cow position:chr18:48527646-48527235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 40

               
               
               Conread position:833-1253
               
               
               Cow position:chr18:54274529-54274935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):282, 24

               
               
               Conread position:833-1255
               
               
               Cow position:chr18:14870325-14870731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:271
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):23, 43

               
               
               Conread position:833-1255
               
               
               Cow position:chr18:19645436-19645853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 59

               
               
               Conread position:833-1255
               
               
               Cow position:chr18:28793822-28793397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:320
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 59

               
               
               Conread position:833-1255
               
               
               Cow position:chr18:33851492-33851898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 57

               
               
               Conread position:834-1253
               
               
               Cow position:chr18:32280563-32280971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 55

               
               
               Conread position:835-977
               
               
               Cow position:chr18:4949771-4949910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):17, 55

               
               
               Conread position:836-1042
               
               
               Cow position:chr18:9897601-9897387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):16, 54

               
               
               Conread position:836-1233
               
               
               Cow position:chr18:55005958-55006347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:255
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):16, 59

               
               
               Conread position:836-1247
               
               
               Cow position:chr18:43284482-43284084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:284
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 41

               
               
               Conread position:836-1248
               
               
               Cow position:chr18:29357379-29356969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 53

               
               
               Conread position:836-1255
               
               
               Cow position:chr18:29044124-29043706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 45

               
               
               Conread position:838-1255
               
               
               Cow position:chr18:16044876-16044475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:260
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):274, 51

               
               
               Conread position:838-1255
               
               
               Cow position:chr18:45978980-45979379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):277, 51

               
               
               Conread position:839-1248
               
               
               Cow position:chr18:726899-727301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 51

               
               
               Conread position:842-1255
               
               
               Cow position:chr18:45886970-45886565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:418
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 48

               
               
               Conread position:843-1253
               
               
               Cow position:chr18:31003497-31003101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:275
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):9, 43

               
               
               Conread position:844-1113
               
               
               Cow position:chr18:56469776-56470035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:161
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):252, 98

               
               
               Conread position:845-1114
               
               
               Cow position:chr18:36444299-36444566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 46

               
               
               Conread position:845-1250
               
               
               Cow position:chr18:9088998-9089376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:273
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):169, 45

               
               
               Conread position:845-1255
               
               
               Cow position:chr18:30406742-30406345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 29

               
               
               Conread position:846-1252
               
               
               Cow position:chr18:23656437-23656820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:272
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):266, 33

               
               
               Conread position:848-1248
               
               
               Cow position:chr18:25957721-25958108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):267, 41

               
               
               Conread position:848-1253
               
               
               Cow position:chr18:1494571-1494968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):244, 41

               
               
               Conread position:848-1253
               
               
               Cow position:chr18:11368502-11368105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):271, 42

               
               
               Conread position:848-1255
               
               
               Cow position:chr18:21738003-21738400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):267, 41

               
               
               Conread position:850-1141
               
               
               Cow position:chr18:54861365-54861083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):262, 52

               
               
               Conread position:850-1155
               
               
               Cow position:chr18:56362426-56362127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):265, 35

               
               
               Conread position:850-1247
               
               
               Cow position:chr18:22181827-22181439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):240, 39

               
               
               Conread position:851-1095
               
               
               Cow position:chr18:37398616-37398854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):161, 39

               
               
               Conread position:851-1253
               
               
               Cow position:chr18:19116179-19115783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 34

               
               
               Conread position:852-1253
               
               
               Cow position:chr18:32283151-32283546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 8

               
               
               Conread position:852-1253
               
               
               Cow position:chr18:32284670-32285065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 8

               
               
               Conread position:852-1253
               
               
               Cow position:chr18:32300816-32301210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 8

               
               
               Conread position:857-1112
               
               
               Cow position:chr18:21527467-21527716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:187
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:857-1138
               
               
               Cow position:chr18:8726331-8726607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:207
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):154, 32

               
               
               Conread position:857-1253
               
               
               Cow position:chr18:32859936-32860321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):255, 32

               
               
               Conread position:857-1255
               
               
               Cow position:chr18:268762-268374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):258, 32

               
               
               Conread position:857-1255
               
               
               Cow position:chr18:31201663-31202051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):258, 32

               
               
               Conread position:858-1236
               
               
               Cow position:chr18:51239536-51239898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:257
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):252, 22

               
               
               Conread position:858-1242
               
               
               Cow position:chr18:33158157-33158530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):257, 33

               
               
               Conread position:858-1255
               
               
               Cow position:chr18:22569735-22569352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):255, 33

               
               
               Conread position:859-1105
               
               
               Cow position:chr18:24219347-24219577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:859-1255
               
               
               Cow position:chr18:10100742-10101138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 30

               
               
               Conread position:859-1255
               
               
               Cow position:chr18:23950107-23949735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):256, 30

               
               
               Conread position:862-1113
               
               
               Cow position:chr18:56472913-56473148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):234, 27

               
               
               Conread position:865-1255
               
               
               Cow position:chr18:33883643-33883252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:397
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):241, 24

               
               
               Conread position:866-1248
               
               
               Cow position:chr18:33372339-33371976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:266
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):249, 25

               
               
               Conread position:868-1247
               
               
               Cow position:chr18:33299204-33299571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 21

               
               
               Conread position:869-1255
               
               
               Cow position:chr18:48450967-48451353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):152, 20

               
               
               Conread position:870-1255
               
               
               Cow position:chr18:9975010-9974650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:266
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):245, 19

               
               
               Conread position:870-1255
               
               
               Cow position:chr18:33274596-33274969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):133, 19

               
               
               Conread position:870-1266
               
               
               Cow position:chr18:4926386-4926758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:274
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):245, 22

               
               
               Conread position:871-1057
               
               
               Cow position:chr18:10890347-10890530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):72, 18

               
               
               Conread position:873-1248
               
               
               Cow position:chr18:20226830-20226478 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:264
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):301, 16

               
               
               Conread position:874-1248
               
               
               Cow position:chr18:40253350-40252986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):241, 15

               
               
               Conread position:875-1248
               
               
               Cow position:chr18:26295467-26295111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:247
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):269, 16

               
               
               Conread position:875-1251
               
               
               Cow position:chr18:4432379-4432743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):240, 14

               
               
               Conread position:875-1255
               
               
               Cow position:chr18:37153782-37153412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):240, 14

               
               
               Conread position:875-1255
               
               
               Cow position:chr18:51211470-51211841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):149, 16

               
               
               Conread position:876-1142
               
               
               Cow position:chr18:35878361-35878099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):239, 15

               
               
               Conread position:877-1252
               
               
               Cow position:chr18:21204712-21205061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:255
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:878-1248
               
               
               Cow position:chr18:4315611-4315967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):190, 10

               
               
               Conread position:880-1255
               
               
               Cow position:chr18:10097466-10097841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 11

               
               
               Conread position:881-1142
               
               
               Cow position:chr18:41269173-41269424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:881-1255
               
               
               Cow position:chr18:52595703-52596071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 103

               
               
               Conread position:882-1255
               
               
               Cow position:chr18:31309432-31309797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):232, 9

               
               
               Conread position:882-1255
               
               
               Cow position:chr18:48011991-48012360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:250
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):202, 9

               
               
               Conread position:884-1251
               
               
               Cow position:chr18:56017793-56017436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):231, 7

               
               
               Conread position:890-1169
               
               
               Cow position:chr18:9804935-9805203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):224, 51

               
               
               Conread position:890-1251
               
               
               Cow position:chr18:33507288-33506933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:232
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):151, 84

               
               
               Conread position:890-1255
               
               
               Cow position:chr18:52463944-52463586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):164, 84

               
               
               Conread position:892-1246
               
               
               Cow position:chr18:37334433-37334780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):223, 89

               
               
               Conread position:895-1059
               
               
               Cow position:chr18:18989064-18988901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:895-1124
               
               
               Cow position:chr18:18445027-18445256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:171
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:895-1253
               
               
               Cow position:chr18:11190736-11191098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):148, 23

               
               
               Conread position:895-1253
               
               
               Cow position:chr18:14816019-14815662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:895-1255
               
               
               Cow position:chr18:10083863-10084200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:247
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):217, 118

               
               
               Conread position:895-1255
               
               
               Cow position:chr18:26485064-26485417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:895-1255
               
               
               Cow position:chr18:41123748-41123387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:231
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):109, 190

               
               
               Conread position:895-1255
               
               
               Cow position:chr18:42422083-42421730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:895-1255
               
               
               Cow position:chr18:54033364-54033717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):215, 97

               
               
               Conread position:896-1248
               
               
               Cow position:chr18:23688227-23687881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 249

               
               
               Conread position:896-1255
               
               
               Cow position:chr18:7950433-7950788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 87

               
               
               Conread position:896-1255
               
               
               Cow position:chr18:27555231-27554879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:263
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 96

               
               
               Conread position:897-1255
               
               
               Cow position:chr18:8967328-8967679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):212, 86

               
               
               Conread position:898-1144
               
               
               Cow position:chr18:30110262-30110015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):164, 31

               
               
               Conread position:898-1255
               
               
               Cow position:chr18:16179724-16180098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:256
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):61, 329

               
               
               Conread position:901-1243
               
               
               Cow position:chr18:27457425-27457093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 61

               
               
               Conread position:904-1248
               
               
               Cow position:chr18:32218922-32218587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):211, 79

               
               
               Conread position:905-1109
               
               
               Cow position:chr18:23423960-23424163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:905-1187
               
               
               Cow position:chr18:36186851-36186579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):210, 96

               
               
               Conread position:905-1214
               
               
               Cow position:chr18:6424964-6424655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):188, 75

               
               
               Conread position:905-1254
               
               
               Cow position:chr18:32323597-32323942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:230
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:905-1255
               
               
               Cow position:chr18:17355729-17356082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:228
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):70, 270

               
               
               Conread position:905-1255
               
               
               Cow position:chr18:48392157-48392510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:246
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):26, 84

               
               
               Conread position:906-1142
               
               
               Cow position:chr18:18074751-18074521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):209, 21

               
               
               Conread position:906-1255
               
               
               Cow position:chr18:35851229-35850888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:223
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):209, 67

               
               
               Conread position:907-1082
               
               
               Cow position:chr18:972475-972648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:907-1113
               
               
               Cow position:chr18:215981-215776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:907-1255
               
               
               Cow position:chr18:29768245-29768589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):207, 74

               
               
               Conread position:907-1255
               
               
               Cow position:chr18:51665885-51666224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):208, 85

               
               
               Conread position:908-1074
               
               
               Cow position:chr18:48501486-48501660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:908-1141
               
               
               Cow position:chr18:18021416-18021187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):207, 43

               
               
               Conread position:911-1143
               
               
               Cow position:chr18:45188470-45188708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):59, 108

               
               
               Conread position:911-1162
               
               
               Cow position:chr18:48530177-48530442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:911-1248
               
               
               Cow position:chr18:56151316-56150988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):204, 72

               
               
               Conread position:911-1253
               
               
               Cow position:chr18:158936-158600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:228
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):132, 69

               
               
               Conread position:911-1255
               
               
               Cow position:chr18:21682648-21682293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 73

               
               
               Conread position:913-1080
               
               
               Cow position:chr18:7485323-7485490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):114, 16

               
               
               Conread position:913-1207
               
               
               Cow position:chr18:36770857-36770565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):51, 237

               
               
               Conread position:913-1210
               
               
               Cow position:chr18:5783741-5783435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):30, 84

               
               
               Conread position:913-1253
               
               
               Cow position:chr18:12118501-12118172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 12

               
               
               Conread position:913-1253
               
               
               Cow position:chr18:45904557-45904219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1254
               
               
               Cow position:chr18:21609478-21609139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr18:7955488-7955823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):199, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr18:11251695-11251360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr18:33605995-33606305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:249
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):202, 22

               
               
               Conread position:913-1255
               
               
               Cow position:chr18:35294901-35295237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr18:36458260-36458609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):176, 70

               
               
               Conread position:914-1080
               
               
               Cow position:chr18:19850637-19850473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:914-1187
               
               
               Cow position:chr18:51457818-51457553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):179, 20

               
               
               Conread position:914-1255
               
               
               Cow position:chr18:33907870-33907536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):201, 78

               
               
               Conread position:916-1216
               
               
               Cow position:chr18:21987198-21987493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:217
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):160, 79

               
               
               Conread position:916-1225
               
               
               Cow position:chr18:16148498-16148193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:218
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):203, 67

               
               
               Conread position:916-1255
               
               
               Cow position:chr18:4322907-4323226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:246
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):181, 58

               
               
               Conread position:916-1255
               
               
               Cow position:chr18:9007506-9007824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:237
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):196, 115

               
               
               Conread position:917-1212
               
               
               Cow position:chr18:19271719-19272007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):25, 60

               
               
               Conread position:917-1248
               
               
               Cow position:chr18:30215898-30216234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:239
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):66, 8

               
               
               Conread position:917-1255
               
               
               Cow position:chr18:1611106-1611437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):198, 66

               
               
               Conread position:918-1255
               
               
               Cow position:chr18:13292853-13293184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:252
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 65

               
               
               Conread position:919-1222
               
               
               Cow position:chr18:4666998-4666710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:218
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):196, 54

               
               
               Conread position:919-1222
               
               
               Cow position:chr18:44407962-44408270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):187, 64

               
               
               Conread position:919-1255
               
               
               Cow position:chr18:55417676-55418004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):196, 15

               
               
               Conread position:920-1060
               
               
               Cow position:chr18:35478978-35479123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:920-1207
               
               
               Cow position:chr18:29210375-29210087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):73, 127

               
               
               Conread position:920-1236
               
               
               Cow position:chr18:33756234-33756549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 233

               
               
               Conread position:920-1239
               
               
               Cow position:chr18:49059048-49059361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:226
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):194, 11

               
               
               Conread position:920-1248
               
               
               Cow position:chr18:42361526-42361187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:226
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):9, 240

               
               
               Conread position:920-1253
               
               
               Cow position:chr18:15485255-15484922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 72

               
               
               Conread position:920-1255
               
               
               Cow position:chr18:41720747-41721079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:209
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):55, 92

               
               
               Conread position:923-1255
               
               
               Cow position:chr18:249534-249201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):176, 39

               
               
               Conread position:925-1103
               
               
               Cow position:chr18:27168724-27168901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:925-1248
               
               
               Cow position:chr18:52854205-52854519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):190, 20

               
               
               Conread position:925-1255
               
               
               Cow position:chr18:22396729-22396405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:233
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):183, 58

               
               
               Conread position:925-1255
               
               
               Cow position:chr18:22874217-22874548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):190, 58

               
               
               Conread position:925-1255
               
               
               Cow position:chr18:33373179-33373508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:212
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):182, 66

               
               
               Conread position:927-1252
               
               
               Cow position:chr18:50638105-50637788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):188, 51

               
               
               Conread position:928-1126
               
               
               Cow position:chr18:17645622-17645821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:134
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):184, 0

               
               
               Conread position:936-1090
               
               
               Cow position:chr18:19320492-19320339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:936-1248
               
               
               Cow position:chr18:18484375-18484063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):63, 46

               
               
               Conread position:936-1255
               
               
               Cow position:chr18:4496815-4496506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:225
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):179, 11

               
               
               Conread position:936-1255
               
               
               Cow position:chr18:45646730-45646429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:937-1142
               
               
               Cow position:chr18:11870147-11870355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:937-1226
               
               
               Cow position:chr18:14778715-14778425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):49, 89

               
               
               Conread position:938-1248
               
               
               Cow position:chr18:6665988-6665688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:212
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):177, 45

               
               
               Conread position:939-1206
               
               
               Cow position:chr18:22413057-22413348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:215
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):83, 44

               
               
               Conread position:940-1246
               
               
               Cow position:chr18:21106782-21106486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:218
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):176, 43

               
               
               Conread position:942-1204
               
               
               Cow position:chr18:6309429-6309682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:194
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):173, 27

               
               
               Conread position:942-1255
               
               
               Cow position:chr18:7930766-7930468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):173, 38

               
               
               Conread position:943-1194
               
               
               Cow position:chr18:2439378-2439116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):124, 40

               
               
               Conread position:943-1252
               
               
               Cow position:chr18:37024188-37023884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 40

               
               
               Conread position:944-1248
               
               
               Cow position:chr18:38090219-38089913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 39

               
               
               Conread position:944-1255
               
               
               Cow position:chr18:17699251-17698947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):178, 38

               
               
               Conread position:944-1255
               
               
               Cow position:chr18:23700497-23700194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):171, 39

               
               
               Conread position:945-1221
               
               
               Cow position:chr18:21551443-21551176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:203
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):170, 38

               
               
               Conread position:945-1232
               
               
               Cow position:chr18:39269120-39268834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 38

               
               
               Conread position:945-1253
               
               
               Cow position:chr18:10107069-10107371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:215
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):154, 43

               
               
               Conread position:945-1255
               
               
               Cow position:chr18:28767747-28768042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:220
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):54, 35

               
               
               Conread position:946-1241
               
               
               Cow position:chr18:6047114-6046823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:219
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):166, 46

               
               
               Conread position:946-1252
               
               
               Cow position:chr18:3098932-3098640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):153, 37

               
               
               Conread position:947-1255
               
               
               Cow position:chr18:16155116-16154821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:226
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):144, 27

               
               
               Conread position:947-1255
               
               
               Cow position:chr18:34056621-34056322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):166, 36

               
               
               Conread position:947-1255
               
               
               Cow position:chr18:46873381-46873682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:216
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):168, 22

               
               
               Conread position:948-1252
               
               
               Cow position:chr18:46879949-46879648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):48, 35

               
               
               Conread position:948-1255
               
               
               Cow position:chr18:1859845-1859547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:223
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):167, 35

               
               
               Conread position:948-1255
               
               
               Cow position:chr18:4579118-4578819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):167, 41

               
               
               Conread position:952-1137
               
               
               Cow position:chr18:5761790-5761605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):163, 40

               
               
               Conread position:952-1203
               
               
               Cow position:chr18:9900276-9900524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):163, 31

               
               
               Conread position:952-1255
               
               
               Cow position:chr18:34051238-34050942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:216
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):163, 31

               
               
               Conread position:953-1255
               
               
               Cow position:chr18:10082257-10082555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):162, 29

               
               
               Conread position:955-1095
               
               
               Cow position:chr18:1022020-1021881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):59, 28

               
               
               Conread position:955-1109
               
               
               Cow position:chr18:50700191-50700351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:955-1186
               
               
               Cow position:chr18:29028623-29028398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):151, 33

               
               
               Conread position:955-1255
               
               
               Cow position:chr18:13977055-13977349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):160, 197

               
               
               Conread position:955-1255
               
               
               Cow position:chr18:17002042-17002336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:215
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):137, 28

               
               
               Conread position:959-1251
               
               
               Cow position:chr18:6834150-6833863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):159, 106

               
               
               Conread position:959-1255
               
               
               Cow position:chr18:17757522-17757226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:201
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):44, 21

               
               
               Conread position:959-1255
               
               
               Cow position:chr18:24635408-24635701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:214
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):156, 24

               
               
               Conread position:961-1246
               
               
               Cow position:chr18:43144990-43144705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:199
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):59, 147

               
               
               Conread position:965-1255
               
               
               Cow position:chr18:11866742-11867028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:210
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):152, 7

               
               
               Conread position:966-1142
               
               
               Cow position:chr18:1664538-1664363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):149, 17

               
               
               Conread position:966-1191
               
               
               Cow position:chr18:1663353-1663135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):149, 17

               
               
               Conread position:966-1255
               
               
               Cow position:chr18:4949951-4950227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:200
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):149, 105

               
               
               Conread position:967-1222
               
               
               Cow position:chr18:24006039-24006292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):145, 5

               
               
               Conread position:967-1253
               
               
               Cow position:chr18:45478327-45478606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):148, 133

               
               
               Conread position:970-1142
               
               
               Cow position:chr18:641154-640982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:127
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):144, 122

               
               
               Conread position:970-1255
               
               
               Cow position:chr18:5185648-5185369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:204
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):145, 175

               
               
               Conread position:970-1255
               
               
               Cow position:chr18:28292363-28292083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:209
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):145, 189

               
               
               Conread position:971-1254
               
               
               Cow position:chr18:28189431-28189152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):146, 17

               
               
               Conread position:973-1161
               
               
               Cow position:chr18:11790343-11790530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):142, 102

               
               
               Conread position:973-1246
               
               
               Cow position:chr18:48481686-48481418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):12, 55

               
               
               Conread position:973-1253
               
               
               Cow position:chr18:37691197-37690924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:205
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):142, 172

               
               
               Conread position:974-1255
               
               
               Cow position:chr18:34020817-34021097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):12, 116

               
               
               Conread position:975-1241
               
               
               Cow position:chr18:37209972-37209712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):140, 170

               
               
               Conread position:975-1253
               
               
               Cow position:chr18:10663094-10663359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):139, 192

               
               
               Conread position:975-1255
               
               
               Cow position:chr18:47579638-47579362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):15, 217

               
               
               Conread position:975-1255
               
               
               Cow position:chr18:55697628-55697340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:214
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):123, 52

               
               
               Conread position:976-1255
               
               
               Cow position:chr18:44262017-44262294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):139, 169

               
               
               Conread position:977-1248
               
               
               Cow position:chr18:12291903-12292166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):137, 88

               
               
               Conread position:982-1251
               
               
               Cow position:chr18:24342031-24342297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:194
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):11, 184

               
               
               Conread position:983-1198
               
               
               Cow position:chr18:4380726-4380940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):132, 36

               
               
               Conread position:983-1251
               
               
               Cow position:chr18:9355858-9355595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):38, 46

               
               
               Conread position:984-1236
               
               
               Cow position:chr18:36379529-36379277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):131, 198

               
               
               Conread position:985-1202
               
               
               Cow position:chr18:53962996-53962778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):122, 198

               
               
               Conread position:985-1255
               
               
               Cow position:chr18:20125719-20125981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):130, 160

               
               
               Conread position:985-1255
               
               
               Cow position:chr18:21265876-21266138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):130, 96

               
               
               Conread position:985-1255
               
               
               Cow position:chr18:27798394-27798130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:195
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):130, 160

               
               
               Conread position:985-1255
               
               
               Cow position:chr18:55783015-55782751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:195
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):130, 167

               
               
               Conread position:986-1247
               
               
               Cow position:chr18:54085138-54084876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):28, 13

               
               
               Conread position:987-1207
               
               
               Cow position:chr18:56165410-56165624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):125, 170

               
               
               Conread position:987-1248
               
               
               Cow position:chr18:10655870-10656115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):127, 169

               
               
               Conread position:987-1253
               
               
               Cow position:chr18:23137806-23137537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):73, 199

               
               
               Conread position:991-1155
               
               
               Cow position:chr18:47985761-47985926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:992-1204
               
               
               Cow position:chr18:32245307-32245101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):122, 158

               
               
               Conread position:992-1204
               
               
               Cow position:chr18:52792062-52792268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:157
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):123, 152

               
               
               Conread position:992-1252
               
               
               Cow position:chr18:11262382-11262635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):120, 99

               
               
               Conread position:992-1255
               
               
               Cow position:chr18:33157208-33157458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):123, 165

               
               
               Conread position:993-1251
               
               
               Cow position:chr18:40141470-40141219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):122, 152

               
               
               Conread position:994-1255
               
               
               Cow position:chr18:18831456-18831711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):122, 143

               
               
               Conread position:994-1255
               
               
               Cow position:chr18:20642058-20641805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):121, 156

               
               
               Conread position:1001-1248
               
               
               Cow position:chr18:55692238-55692490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:1001-1255
               
               
               Cow position:chr18:53829732-53829483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):6, 10

               
               
               Conread position:1002-1246
               
               
               Cow position:chr18:27529791-27530030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):70, 158

               
               
               Conread position:1002-1255
               
               
               Cow position:chr18:17927572-17927819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):113, 143

               
               
               Conread position:1003-1216
               
               
               Cow position:chr18:15410107-15409897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):111, 64

               
               
               Conread position:1003-1242
               
               
               Cow position:chr18:19199612-19199850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:169
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):89, 145

               
               
               Conread position:1003-1255
               
               
               Cow position:chr18:10112431-10112680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):112, 182

               
               
               Conread position:1004-1155
               
               
               Cow position:chr18:45104997-45104845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:1004-1233
               
               
               Cow position:chr18:49542919-49543142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):86, 149

               
               
               Conread position:1006-1144
               
               
               Cow position:chr18:11922121-11921982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:103
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:1006-1255
               
               
               Cow position:chr18:11376797-11377046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 176

               
               
               Conread position:1007-1252
               
               
               Cow position:chr18:24712242-24711997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):108, 175

               
               
               Conread position:1007-1252
               
               
               Cow position:chr18:44484608-44484380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):90, 52

               
               
               Conread position:1007-1253
               
               
               Cow position:chr18:33895593-33895842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):72, 21

               
               
               Conread position:1007-1255
               
               
               Cow position:chr18:11680124-11680365 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:1007-1255
               
               
               Cow position:chr18:43950273-43950514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):108, 119

               
               
               Conread position:1008-1255
               
               
               Cow position:chr18:8963957-8964190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:1009-1247
               
               
               Cow position:chr18:24502705-24502943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):9, 57

               
               
               Conread position:1009-1254
               
               
               Cow position:chr18:40758647-40758890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):104, 143

               
               
               Conread position:1011-1216
               
               
               Cow position:chr18:6610383-6610182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:153
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):104, 18

               
               
               Conread position:1011-1253
               
               
               Cow position:chr18:54031141-54031383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):34, 20

               
               
               Conread position:1011-1255
               
               
               Cow position:chr18:26355620-26355385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):104, 89

               
               
               Conread position:1012-1247
               
               
               Cow position:chr18:5786476-5786705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:162
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):103, 133

               
               
               Conread position:1012-1255
               
               
               Cow position:chr18:13173089-13172850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):10, 150

               
               
               Conread position:1014-1255
               
               
               Cow position:chr18:4556945-4556710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):100, 72

               
               
               Conread position:1014-1255
               
               
               Cow position:chr18:35752211-35751975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:180
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):58, 147

               
               
               Conread position:1014-1255
               
               
               Cow position:chr18:37002075-37002306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):101, 138

               
               
               Conread position:1015-1248
               
               
               Cow position:chr18:25206857-25206630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):5, 131

               
               
               Conread position:1021-1255
               
               
               Cow position:chr18:55787379-55787601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):89, 17

               
               
               Conread position:1022-1241
               
               
               Cow position:chr18:22391256-22391044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:153
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):93, 62

               
               
               Conread position:1023-1207
               
               
               Cow position:chr18:2592662-2592477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):85, 160

               
               
               Conread position:1023-1242
               
               
               Cow position:chr18:29759167-29759380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:161
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):92, 133

               
               
               Conread position:1023-1248
               
               
               Cow position:chr18:3193183-3193401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):94, 63

               
               
               Conread position:1023-1253
               
               
               Cow position:chr18:22065917-22065688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:177
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):92, 5

               
               
               Conread position:1023-1255
               
               
               Cow position:chr18:16418235-16418018 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:1023-1255
               
               
               Cow position:chr18:25165079-25164858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):91, 122

               
               
               Conread position:1023-1255
               
               
               Cow position:chr18:32020070-32019844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):92, 122

               
               
               Conread position:1023-1255
               
               
               Cow position:chr18:35364322-35364095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):75, 126

               
               
               Conread position:1024-1241
               
               
               Cow position:chr18:51191302-51191091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:161
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):91, 132

               
               
               Conread position:1026-1244
               
               
               Cow position:chr18:51500638-51500413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):52, 161

               
               
               Conread position:1026-1246
               
               
               Cow position:chr18:28925660-28925446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):89, 119

               
               
               Conread position:1026-1248
               
               
               Cow position:chr18:54928605-54928385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):21, 123

               
               
               Conread position:1026-1255
               
               
               Cow position:chr18:3416628-3416848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):88, 24

               
               
               Conread position:1026-1255
               
               
               Cow position:chr18:37314927-37314704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):89, 119

               
               
               Conread position:1026-1255
               
               
               Cow position:chr18:42223783-42224009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):72, 131

               
               
               Conread position:1026-1255
               
               
               Cow position:chr18:55590021-55589800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):86, 65

               
               
               Conread position:1026-1268
               
               
               Cow position:chr18:39875838-39875603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):89, 37

               
               
               Conread position:1028-1248
               
               
               Cow position:chr18:9557573-9557360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:156
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):87, 64

               
               
               Conread position:1028-1255
               
               
               Cow position:chr18:30793914-30794130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):87, 101

               
               
               Conread position:1029-1255
               
               
               Cow position:chr18:42249728-42249503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):86, 156

               
               
               Conread position:1029-1262
               
               
               Cow position:chr18:29241090-29241325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):158, 49

               
               
               Conread position:1031-1226
               
               
               Cow position:chr18:24978111-24977926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:1031-1252
               
               
               Cow position:chr18:28992509-28992288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):6, 150

               
               
               Conread position:1031-1253
               
               
               Cow position:chr18:36346613-36346394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):83, 126

               
               
               Conread position:1031-1255
               
               
               Cow position:chr18:23631121-23630900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):84, 127

               
               
               Conread position:1032-1205
               
               
               Cow position:chr18:4603057-4602890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:128
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):83, 129

               
               
               Conread position:1033-1239
               
               
               Cow position:chr18:36265359-36265153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):57, 81

               
               
               Conread position:1033-1255
               
               
               Cow position:chr18:13877273-13877054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:157
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):82, 23

               
               
               Conread position:1033-1255
               
               
               Cow position:chr18:19193886-19193670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):82, 125

               
               
               Conread position:1033-1255
               
               
               Cow position:chr18:21721821-21721605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):82, 117

               
               
               Conread position:1034-1255
               
               
               Cow position:chr18:28086622-28086837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:158
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):81, 111

               
               
               Conread position:1042-1255
               
               
               Cow position:chr18:16139963-16139752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:143
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):139, 0

               
               
               Conread position:1043-1248
               
               
               Cow position:chr18:16378439-16378639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):72, 101

               
               
               Conread position:1043-1255
               
               
               Cow position:chr18:9066192-9066393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):195, 60

               
               
               Conread position:1043-1255
               
               
               Cow position:chr18:22591656-22591450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):71, 102

               
               
               Conread position:1046-1255
               
               
               Cow position:chr18:38984851-38985051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:145
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:1047-1255
               
               
               Cow position:chr18:6742260-6742054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:144
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):73, 68

               
               
               Conread position:1048-1247
               
               
               Cow position:chr18:31673034-31672836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:140
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):50, 104

               
               
               Conread position:1050-1208
               
               
               Cow position:chr18:33609711-33609868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):65, 135

               
               
               Conread position:1050-1248
               
               
               Cow position:chr18:18056803-18056605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):65, 132

               
               
               Conread position:1051-1255
               
               
               Cow position:chr18:32876123-32876321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):64, 94

               
               
               Conread position:1055-1255
               
               
               Cow position:chr18:29648270-29648464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):59, 84

               
               
               Conread position:1055-1255
               
               
               Cow position:chr18:41072340-41072542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):39, 140

               
               
               Conread position:1056-1255
               
               
               Cow position:chr18:54574836-54574638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):53, 89

               
               
               Conread position:1058-1253
               
               
               Cow position:chr18:10897145-10897333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):57, 87

               
               
               Conread position:1058-1255
               
               
               Cow position:chr18:7964715-7964906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):57, 100

               
               
               Conread position:1058-1255
               
               
               Cow position:chr18:43538948-43539139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):57, 87

               
               
               Conread position:1059-1255
               
               
               Cow position:chr18:6441682-6441872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):56, 86

               
               
               Conread position:1060-1240
               
               
               Cow position:chr18:55119356-55119534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):55, 84

               
               
               Conread position:1061-1255
               
               
               Cow position:chr18:12585652-12585465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):54, 36

               
               
               Conread position:1062-1255
               
               
               Cow position:chr18:6290279-6290459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):83, 42

               
               
               Conread position:1062-1255
               
               
               Cow position:chr18:24021879-24022066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):53, 83

               
               
               Conread position:1068-1255
               
               
               Cow position:chr18:39709384-39709565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):55, 83

               
               
               Conread position:1078-1255
               
               
               Cow position:chr18:24548018-24547847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):37, 67

               
               
               Conread position:1079-1255
               
               
               Cow position:chr18:37339386-37339207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):33, 103

               
               
               Conread position:1082-1252
               
               
               Cow position:chr18:44048081-44048251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):33, 102

               
               
               Conread position:1088-1248
               
               
               Cow position:chr18:4540358-4540204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):27, 57

               
               
               Conread position:1088-1255
               
               
               Cow position:chr18:21175636-21175803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):27, 59

               
               
               Conread position:1093-1255
               
               
               Cow position:chr18:50381517-50381679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):22, 90

               
               
               Conread position:1094-1248
               
               
               Cow position:chr18:15688960-15689116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):21, 91

               
               
               Conread position:1094-1255
               
               
               Cow position:chr18:52635561-52635406 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):21, 57

               
               
               Conread position:1098-1253
               
               
               Cow position:chr18:40261489-40261334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):17, 86

               
               
               Conread position:1102-1254
               
               
               Cow position:chr18:23424402-23424553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:112
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):13, 39

               
               
               Conread position:1106-1251
               
               
               Cow position:chr18:4765769-4765624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:113
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):9, 77
Show alignments to all cow chromosomes.