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Cow genome map

           
Conread name:
           
Ss1.1-Liv1-LVRM1B080021.5
        

               
Conread position:
               
465-670
               

               
Cow position:
               
chr20:28822881-28822679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
483-666
               

               
Cow position:
               
chr20:9996890-9997073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
483-670
               

               
Cow position:
               
chr20:7225523-7225707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
491-670
               

               
Cow position:
               
chr20:40781100-40781278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
492-666
               

               
Cow position:
               
chr20:37271633-37271807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
492-667
               

               
Cow position:
               
chr20:26999858-27000033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
492-673
               

               
Cow position:
               
chr20:5575635-5575814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
493-638
               

               
Cow position:
               
chr20:35973293-35973148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-605
               

               
Cow position:
               
chr20:3808408-3808297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-618
               

               
Cow position:
               
chr20:5085972-5085848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-618
               

               
Cow position:
               
chr20:13506197-13506073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-638
               

               
Cow position:
               
chr20:20364379-20364236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
494-638
               

               
Cow position:
               
chr20:26075922-26076066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 73
               

               
Conread position:
               
494-638
               

               
Cow position:
               
chr20:34231505-34231361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-645
               

               
Cow position:
               
chr20:13050192-13050042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
494-649
               

               
Cow position:
               
chr20:22060812-22060657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-649
               

               
Cow position:
               
chr20:26738142-26738297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:753806-753966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:826145-826305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:6135626-6135466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:8445777-8445937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:9223217-9223377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:11331309-11331149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:12177125-12176965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:13619423-13619263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:14836552-14836710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:14925277-14925117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:17668105-17668270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:18092535-18092377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:22185649-22185489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:26052988-26052828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:28323843-28324003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:30384880-30384720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:30479474-30479634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:31504698-31504858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:31784948-31784788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:32451990-32451830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-654
               

               
Cow position:
               
chr20:37154601-37154441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr20:27994159-27993996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr20:36311138-36310974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-661
               

               
Cow position:
               
chr20:18549676-18549843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-661
               

               
Cow position:
               
chr20:29314220-29314388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
494-663
               

               
Cow position:
               
chr20:10686094-10686263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:7568601-7568435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:7593088-7592921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:11635638-11635467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:13653969-13653804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:19155798-19155627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:19352704-19352540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:28113347-28113520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-667
               

               
Cow position:
               
chr20:28956586-28956413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-668
               

               
Cow position:
               
chr20:14512061-14512233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:775023-775199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:3782339-3782162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:5503382-5503206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:6097300-6097129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:7081451-7081275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:10035377-10035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:10099488-10099664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:10839093-10838923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:13303933-13303757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:13660980-13660804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:14327250-14327075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:16515688-16515864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:16559167-16558991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:20439604-20439428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:21719922-21720093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:22048731-22048907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:28141105-28141281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:28443984-28443808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 129
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:29285243-29285067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:30546712-30546888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:34458907-34458729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr20:41111058-41110881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr20:4205014-4205192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr20:20731623-20731802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr20:25658659-25658482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
494-671
               

               
Cow position:
               
chr20:40423963-40423787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
494-672
               

               
Cow position:
               
chr20:13575180-13575008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
494-672
               

               
Cow position:
               
chr20:13954986-13955167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr20:16526662-16526841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-673
               

               
Cow position:
               
chr20:23106771-23106947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
494-674
               

               
Cow position:
               
chr20:18322192-18322018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
174, 63
               

               
Conread position:
               
494-676
               

               
Cow position:
               
chr20:19364520-19364337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
494-763
               

               
Cow position:
               
chr20:8890670-8890935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
495-640
               

               
Cow position:
               
chr20:7933023-7933168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-644
               

               
Cow position:
               
chr20:19018042-19017897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr20:7995177-7995018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr20:16106814-16106970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr20:20779419-20779263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr20:24399499-24399343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-651
               

               
Cow position:
               
chr20:35112397-35112551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr20:15295384-15295546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr20:23802516-23802679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-658
               

               
Cow position:
               
chr20:28560528-28560365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-662
               

               
Cow position:
               
chr20:35128329-35128496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-666
               

               
Cow position:
               
chr20:6258928-6258763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
495-666
               

               
Cow position:
               
chr20:9589141-9589315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr20:8870931-8870756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr20:10494557-10494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr20:25330798-25330628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr20:32938659-32938827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
495-667
               

               
Cow position:
               
chr20:42254679-42254507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:5958779-5958604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:6550632-6550457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:7597491-7597321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:9339380-9339554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:9700687-9700862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:10405060-10405235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:10921559-10921385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:11454237-11454062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:12435034-12434859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:12567950-12567779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:12827111-12826938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:13677380-13677202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:14720991-14720817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:17657866-17657691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:22222238-22222065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:23466283-23466109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:24904178-24904005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:25856538-25856709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:27876852-27877024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:29371055-29370880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:30689240-30689413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:31846462-31846289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:35037014-35036839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr20:35844064-35843895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr20:12694668-12694846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr20:15090006-15089830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-673
               

               
Cow position:
               
chr20:5269670-5269488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
495-673
               

               
Cow position:
               
chr20:9536261-9536440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
169, 118
               

               
Conread position:
               
495-673
               

               
Cow position:
               
chr20:13766257-13766434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
495-679
               

               
Cow position:
               
chr20:31000564-31000746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
496-609
               

               
Cow position:
               
chr20:29318586-29318696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
496-638
               

               
Cow position:
               
chr20:33246944-33246804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
496-644
               

               
Cow position:
               
chr20:34643376-34643524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-654
               

               
Cow position:
               
chr20:24567905-24567747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-654
               

               
Cow position:
               
chr20:30146798-30146956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-658
               

               
Cow position:
               
chr20:28165209-28165371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-666
               

               
Cow position:
               
chr20:21768246-21768077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr20:6239774-6239607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr20:28294688-28294857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr20:32351967-32352133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:6055368-6055190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:9007468-9007294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:18490320-18490489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:21018684-21018857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:29843675-29843842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:32164737-32164565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:35159224-35159050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-670
               

               
Cow position:
               
chr20:36418355-36418182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
496-671
               

               
Cow position:
               
chr20:12996876-12996701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
496-671
               

               
Cow position:
               
chr20:20935770-20935595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-671
               

               
Cow position:
               
chr20:27896083-27895908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-672
               

               
Cow position:
               
chr20:12047846-12048022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr20:19845142-19845316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr20:40256029-40256204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
497-653
               

               
Cow position:
               
chr20:20352018-20351864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr20:12333049-12333216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr20:14877428-14877600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
165, 60
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr20:15527113-15527286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr20:33563785-33563958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr20:34597992-34597820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
497-673
               

               
Cow position:
               
chr20:33731121-33731296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
498-650
               

               
Cow position:
               
chr20:15780828-15780676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
498-667
               

               
Cow position:
               
chr20:21015626-21015458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
498-671
               

               
Cow position:
               
chr20:5077319-5077495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
499-672
               

               
Cow position:
               
chr20:21398187-21398360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
509-670
               

               
Cow position:
               
chr20:17845096-17845257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
511-670
               

               
Cow position:
               
chr20:14585479-14585646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
511-670
               

               
Cow position:
               
chr20:40587967-40588126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 112
               

               
Conread position:
               
513-670
               

               
Cow position:
               
chr20:16942255-16942099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
514-670
               

               
Cow position:
               
chr20:30816683-30816838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
519-670
               

               
Cow position:
               
chr20:4895967-4895821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
523-643
               

               
Cow position:
               
chr20:9432765-9432885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
523-651
               

               
Cow position:
               
chr20:19441313-19441441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
523-654
               

               
Cow position:
               
chr20:11516641-11516512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
523-667
               

               
Cow position:
               
chr20:9707741-9707601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
523-670
               

               
Cow position:
               
chr20:34375354-34375502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
526-673
               

               
Cow position:
               
chr20:7512539-7512389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
527-658
               

               
Cow position:
               
chr20:25844935-25844804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
529-667
               

               
Cow position:
               
chr20:18608676-18608812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
548-667
               

               
Cow position:
               
chr20:14473031-14472912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
550-1255
               

               
Cow position:
               
chr20:29783764-29784465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 289
               

               
Conread position:
               
775-1089
               

               
Cow position:
               
chr20:28725284-28725589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
779-1251
               

               
Cow position:
               
chr20:30816817-30817282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
782-1255
               

               
Cow position:
               
chr20:14436069-14436546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
785-1245
               

               
Cow position:
               
chr20:20364194-20363738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
786-978
               

               
Cow position:
               
chr20:21925712-21925522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
786-1108
               

               
Cow position:
               
chr20:14585637-14585956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
786-1227
               

               
Cow position:
               
chr20:23106935-23107364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
786-1252
               

               
Cow position:
               
chr20:35843893-35843442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
786-1255
               

               
Cow position:
               
chr20:20731791-20732239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
787-1207
               

               
Cow position:
               
chr20:7933231-7933656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
787-1231
               

               
Cow position:
               
chr20:1744824-1745259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
788-1134
               

               
Cow position:
               
chr20:28560361-28560020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1251
               

               
Cow position:
               
chr20:15295550-15296008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr20:5538677-5539139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr20:13766415-13766873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr20:23802683-23803141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
788-1255
               

               
Cow position:
               
chr20:40058044-40058505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
789-925
               

               
Cow position:
               
chr20:4725736-4725870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
789-995
               

               
Cow position:
               
chr20:19654161-19653958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
789-1017
               

               
Cow position:
               
chr20:30146965-30147190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1025
               

               
Cow position:
               
chr20:28714696-28714460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
789-1043
               

               
Cow position:
               
chr20:7597328-7597077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
789-1047
               

               
Cow position:
               
chr20:775192-775446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1080
               

               
Cow position:
               
chr20:6550464-6550176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1083
               

               
Cow position:
               
chr20:22048900-22049191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1111
               

               
Cow position:
               
chr20:9223386-9223704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1113
               

               
Cow position:
               
chr20:24542870-24543191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1114
               

               
Cow position:
               
chr20:9339547-9339871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
789-1136
               

               
Cow position:
               
chr20:16515857-16516202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
789-1139
               

               
Cow position:
               
chr20:6135457-6135109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1142
               

               
Cow position:
               
chr20:35159057-35158706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1154
               

               
Cow position:
               
chr20:16558998-16558637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
789-1155
               

               
Cow position:
               
chr20:7081282-7080917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1155
               

               
Cow position:
               
chr20:16942106-16941747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
789-1155
               

               
Cow position:
               
chr20:24620734-24621099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1155
               

               
Cow position:
               
chr20:32451821-32451456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1198
               

               
Cow position:
               
chr20:23466116-23465722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1207
               

               
Cow position:
               
chr20:16107035-16107432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
789-1216
               

               
Cow position:
               
chr20:22185481-22185057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
789-1247
               

               
Cow position:
               
chr20:30384711-30384263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:826314-826769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:8445946-8446396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:8970371-8969925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:14836719-14837169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:15089838-15089390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:19441453-19441901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:24567738-24567288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:26052819-26052370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
789-1248
               

               
Cow position:
               
chr20:35094057-35094506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr20:13506045-13505595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr20:14327082-14326632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr20:31504867-31505319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1251
               

               
Cow position:
               
chr20:40588119-40588569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1252
               

               
Cow position:
               
chr20:22274575-22274121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1252
               

               
Cow position:
               
chr20:29285074-29284621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:753975-754432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:1761328-1761784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:5503213-5502750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:5958611-5958154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:8247456-8246999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:9700855-9701300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:10099657-10100114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:12567786-12567338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:13303764-13303308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:13619254-13618803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:16449006-16449450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:17657698-17657251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:17863658-17864115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:18092078-18091623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:18168674-18169131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:18651143-18651599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:22060644-22060187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:22209155-22209612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:25122703-25122246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:26826326-26825872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:28324012-28324469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:28443815-28443361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:30479643-30480100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:30689406-30689862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:30737109-30736648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:31784779-31784322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:34458736-34458283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:34968535-34968991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:35072916-35073372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:35169578-35170033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:36310969-36310512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:36854276-36854732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:37154432-37153976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:38956544-38956087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:39391608-39391151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:40504188-40503731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
789-1255
               

               
Cow position:
               
chr20:41975342-41975799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
790-977
               

               
Cow position:
               
chr20:10035215-10035031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
790-1011
               

               
Cow position:
               
chr20:3782164-3781948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
790-1015
               

               
Cow position:
               
chr20:14921093-14921311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
790-1096
               

               
Cow position:
               
chr20:36374664-36374366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
790-1102
               

               
Cow position:
               
chr20:2881313-2881004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
790-1106
               

               
Cow position:
               
chr20:12826944-12826630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1113
               

               
Cow position:
               
chr20:15527280-15527593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1141
               

               
Cow position:
               
chr20:5795304-5795649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 13
               

               
Conread position:
               
790-1142
               

               
Cow position:
               
chr20:22222071-22221724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
790-1197
               

               
Cow position:
               
chr20:28100278-28099880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1236
               

               
Cow position:
               
chr20:9707591-9707158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
790-1236
               

               
Cow position:
               
chr20:10405229-10405672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1239
               

               
Cow position:
               
chr20:6477040-6477471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
790-1242
               

               
Cow position:
               
chr20:28113514-28113957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
790-1247
               

               
Cow position:
               
chr20:39030680-39030234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 17
               

               
Conread position:
               
790-1248
               

               
Cow position:
               
chr20:12996708-12996266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
790-1253
               

               
Cow position:
               
chr20:9410881-9411333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:9007300-9006836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:10235149-10235602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:10760189-10759737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:12176955-12176498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:12434865-12434423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:14760419-14759958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
790-1255
               

               
Cow position:
               
chr20:27877018-27877473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
791-962
               

               
Cow position:
               
chr20:10538175-10538340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
791-1053
               

               
Cow position:
               
chr20:33731280-33731550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
791-1244
               

               
Cow position:
               
chr20:22211506-22211934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
791-1255
               

               
Cow position:
               
chr20:32938830-32939276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
792-1086
               

               
Cow position:
               
chr20:39546967-39547244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
792-1248
               

               
Cow position:
               
chr20:19146166-19146613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
792-1255
               

               
Cow position:
               
chr20:1024715-1024262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
793-1048
               

               
Cow position:
               
chr20:12694850-12695100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
793-1064
               

               
Cow position:
               
chr20:13711269-13711001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
793-1096
               

               
Cow position:
               
chr20:14877597-14877893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
793-1101
               

               
Cow position:
               
chr20:18322030-18321727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
793-1110
               

               
Cow position:
               
chr20:10576736-10576433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
793-1123
               

               
Cow position:
               
chr20:15240506-15240179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
793-1123
               

               
Cow position:
               
chr20:25019042-25018713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
793-1153
               

               
Cow position:
               
chr20:7227305-7226946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
793-1189
               

               
Cow position:
               
chr20:5575804-5576171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
793-1198
               

               
Cow position:
               
chr20:31564682-31564285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
793-1221
               

               
Cow position:
               
chr20:13653802-13653392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
793-1244
               

               
Cow position:
               
chr20:7875347-7874895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
793-1248
               

               
Cow position:
               
chr20:6258754-6258320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
793-1248
               

               
Cow position:
               
chr20:9432912-9433345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
793-1248
               

               
Cow position:
               
chr20:25658490-25658046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
793-1253
               

               
Cow position:
               
chr20:869285-868804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr20:5077494-5077947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
793-1255
               

               
Cow position:
               
chr20:19340778-19340318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
794-1105
               

               
Cow position:
               
chr20:3468912-3469220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
794-1212
               

               
Cow position:
               
chr20:24507533-24507121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 29
               

               
Conread position:
               
794-1215
               

               
Cow position:
               
chr20:35973085-35972671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
794-1233
               

               
Cow position:
               
chr20:17845251-17845682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
794-1255
               

               
Cow position:
               
chr20:34776430-34776885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
795-963
               

               
Cow position:
               
chr20:22921159-22920994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
795-989
               

               
Cow position:
               
chr20:10497751-10497938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
795-989
               

               
Cow position:
               
chr20:13501189-13501380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-994
               

               
Cow position:
               
chr20:4622066-4621873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1037
               

               
Cow position:
               
chr20:26076094-26076325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
795-1053
               

               
Cow position:
               
chr20:36182713-36182461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
795-1054
               

               
Cow position:
               
chr20:5782083-5782337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
795-1074
               

               
Cow position:
               
chr20:12241583-12241299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1097
               

               
Cow position:
               
chr20:7225709-7225994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
795-1097
               

               
Cow position:
               
chr20:39375624-39375327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
795-1105
               

               
Cow position:
               
chr20:20966395-20966704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 38
               

               
Conread position:
               
795-1111
               

               
Cow position:
               
chr20:16584543-16584851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1113
               

               
Cow position:
               
chr20:18099500-18099816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1118
               

               
Cow position:
               
chr20:19314019-19313703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1142
               

               
Cow position:
               
chr20:28956401-28956058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
795-1153
               

               
Cow position:
               
chr20:29055954-29056306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
298, 28
               

               
Conread position:
               
795-1155
               

               
Cow position:
               
chr20:5785916-5786273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1155
               

               
Cow position:
               
chr20:6055186-6054825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
795-1194
               

               
Cow position:
               
chr20:12553021-12552645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1198
               

               
Cow position:
               
chr20:28294857-28295252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
795-1231
               

               
Cow position:
               
chr20:2942613-2943045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
795-1233
               

               
Cow position:
               
chr20:21768072-21767657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
795-1236
               

               
Cow position:
               
chr20:14539687-14540121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
795-1236
               

               
Cow position:
               
chr20:30996957-30997366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
795-1245
               

               
Cow position:
               
chr20:8187929-8187479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr20:10468374-10468817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr20:11454060-11453611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr20:31261038-31261476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr20:40423790-40423347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 34
               

               
Conread position:
               
795-1248
               

               
Cow position:
               
chr20:40781280-40781720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1252
               

               
Cow position:
               
chr20:20779239-20778793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
795-1254
               

               
Cow position:
               
chr20:10288222-10288674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
795-1254
               

               
Cow position:
               
chr20:34597820-34597367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:4945951-4945495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:12421334-12420888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:13771209-13771662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
305, 16
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:19845305-19845752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:20353605-20353164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:20983319-20983775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:24399325-24398882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:24439711-24440182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:27339377-27339813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:29370879-29370428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:31846279-31845831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:34107268-34107715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
795-1255
               

               
Cow position:
               
chr20:35128504-35128965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
796-1048
               

               
Cow position:
               
chr20:9987685-9987932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
796-1086
               

               
Cow position:
               
chr20:3034435-3034719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
796-1113
               

               
Cow position:
               
chr20:30777245-30777552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
796-1142
               

               
Cow position:
               
chr20:30488313-30488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
796-1205
               

               
Cow position:
               
chr20:35146266-35146669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
796-1227
               

               
Cow position:
               
chr20:29318722-29319146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
796-1234
               

               
Cow position:
               
chr20:24522722-24523160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
796-1255
               

               
Cow position:
               
chr20:33304186-33303737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
797-1016
               

               
Cow position:
               
chr20:31748886-31749100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
797-1142
               

               
Cow position:
               
chr20:34486200-34486541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
797-1248
               

               
Cow position:
               
chr20:6017766-6017323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
797-1250
               

               
Cow position:
               
chr20:3060018-3059571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
797-1251
               

               
Cow position:
               
chr20:13325633-13326082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
797-1255
               

               
Cow position:
               
chr20:6501116-6501549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
797-1255
               

               
Cow position:
               
chr20:18490492-18490943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
797-1255
               

               
Cow position:
               
chr20:34375514-34375972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
798-1033
               

               
Cow position:
               
chr20:10178766-10178535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1039
               

               
Cow position:
               
chr20:8596163-8596403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
798-1055
               

               
Cow position:
               
chr20:36883235-36882992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
798-1065
               

               
Cow position:
               
chr20:15074209-15074472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
798-1100
               

               
Cow position:
               
chr20:25656834-25657127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
798-1100
               

               
Cow position:
               
chr20:30188331-30188625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
798-1118
               

               
Cow position:
               
chr20:5086521-5086838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1129
               

               
Cow position:
               
chr20:25330620-25330305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1142
               

               
Cow position:
               
chr20:42310633-42310293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
798-1155
               

               
Cow position:
               
chr20:7994996-7994642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
798-1155
               

               
Cow position:
               
chr20:11098747-11098405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
317, 28
               

               
Conread position:
               
798-1205
               

               
Cow position:
               
chr20:15235155-15235543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 31
               

               
Conread position:
               
798-1216
               

               
Cow position:
               
chr20:30353832-30353408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
798-1242
               

               
Cow position:
               
chr20:14740782-14740351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
798-1248
               

               
Cow position:
               
chr20:6423290-6423708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 31
               

               
Conread position:
               
798-1248
               

               
Cow position:
               
chr20:21398361-21398784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 29
               

               
Conread position:
               
798-1249
               

               
Cow position:
               
chr20:5026042-5025612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
798-1253
               

               
Cow position:
               
chr20:15746502-15746948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
798-1253
               

               
Cow position:
               
chr20:27063305-27063747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
798-1253
               

               
Cow position:
               
chr20:35145315-35145755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
798-1254
               

               
Cow position:
               
chr20:24831733-24831298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr20:13464806-13465250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr20:13575007-13574559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 31
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr20:19155622-19155159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr20:19352463-19352011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
798-1255
               

               
Cow position:
               
chr20:38001021-38001469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
799-1244
               

               
Cow position:
               
chr20:13789621-13790048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
800-1255
               

               
Cow position:
               
chr20:14583370-14582919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
803-965
               

               
Cow position:
               
chr20:2802530-2802371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
803-1016
               

               
Cow position:
               
chr20:31220819-31221029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
803-1137
               

               
Cow position:
               
chr20:42425119-42425451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
803-1142
               

               
Cow position:
               
chr20:37271821-37272148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
803-1247
               

               
Cow position:
               
chr20:8429044-8429490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
803-1254
               

               
Cow position:
               
chr20:14573064-14572629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
803-1255
               

               
Cow position:
               
chr20:9536445-9536887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
803-1255
               

               
Cow position:
               
chr20:10914028-10913584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
803-1255
               

               
Cow position:
               
chr20:26737901-26737459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
805-1092
               

               
Cow position:
               
chr20:10686274-10686553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
805-1100
               

               
Cow position:
               
chr20:14930909-14931201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
162, 49
               

               
Conread position:
               
805-1247
               

               
Cow position:
               
chr20:15117358-15117790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
805-1253
               

               
Cow position:
               
chr20:27978426-27977980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
805-1255
               

               
Cow position:
               
chr20:22006768-22007206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
806-1249
               

               
Cow position:
               
chr20:42931391-42931839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
806-1255
               

               
Cow position:
               
chr20:27332401-27331949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
806-1255
               

               
Cow position:
               
chr20:28282617-28283068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
806-1255
               

               
Cow position:
               
chr20:32164169-32163731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
807-1114
               

               
Cow position:
               
chr20:4579485-4579186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
807-1248
               

               
Cow position:
               
chr20:28141290-28141725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
807-1253
               

               
Cow position:
               
chr20:7803896-7803460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 26
               

               
Conread position:
               
807-1253
               

               
Cow position:
               
chr20:14472899-14472461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
807-1255
               

               
Cow position:
               
chr20:21720093-21720527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
808-1009
               

               
Cow position:
               
chr20:38123289-38123483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
808-1102
               

               
Cow position:
               
chr20:29633677-29633394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
808-1110
               

               
Cow position:
               
chr20:14673086-14673395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
808-1247
               

               
Cow position:
               
chr20:33180923-33180487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
808-1252
               

               
Cow position:
               
chr20:14866838-14866400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
808-1255
               

               
Cow position:
               
chr20:28246868-28246431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 81
               

               
Conread position:
               
809-1142
               

               
Cow position:
               
chr20:31000747-31001062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
809-1142
               

               
Cow position:
               
chr20:35368546-35368886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
809-1253
               

               
Cow position:
               
chr20:14512246-14512682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
809-1254
               

               
Cow position:
               
chr20:12141718-12141298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
203, 20
               

               
Conread position:
               
809-1264
               

               
Cow position:
               
chr20:26679156-26679597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
811-1127
               

               
Cow position:
               
chr20:12333231-12333536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
811-1155
               

               
Cow position:
               
chr20:10838898-10838577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
811-1207
               

               
Cow position:
               
chr20:5786478-5786872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
811-1246
               

               
Cow position:
               
chr20:27842948-27843375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
811-1247
               

               
Cow position:
               
chr20:33306172-33306599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
811-1248
               

               
Cow position:
               
chr20:12320950-12321376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
811-1248
               

               
Cow position:
               
chr20:18609055-18609473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
811-1252
               

               
Cow position:
               
chr20:31076857-31077283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
811-1262
               

               
Cow position:
               
chr20:29395558-29396012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
812-1011
               

               
Cow position:
               
chr20:40543990-40543799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
812-1079
               

               
Cow position:
               
chr20:37583557-37583823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
812-1208
               

               
Cow position:
               
chr20:28822662-28822284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
812-1253
               

               
Cow position:
               
chr20:3294443-3294014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
812-1338
               

               
Cow position:
               
chr20:27000615-27001135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
813-1203
               

               
Cow position:
               
chr20:41110868-41110494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
813-1253
               

               
Cow position:
               
chr20:10062384-10061968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
813-1255
               

               
Cow position:
               
chr20:7110802-7110368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
813-1255
               

               
Cow position:
               
chr20:25274893-25274471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
814-1188
               

               
Cow position:
               
chr20:36418166-36417804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
814-1255
               

               
Cow position:
               
chr20:25844746-25844317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
814-1255
               

               
Cow position:
               
chr20:36424041-36424472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
814-1255
               

               
Cow position:
               
chr20:42254496-42254065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
815-1253
               

               
Cow position:
               
chr20:4735694-4735267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
815-1255
               

               
Cow position:
               
chr20:23791933-23792354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 14
               

               
Conread position:
               
815-1255
               

               
Cow position:
               
chr20:23871501-23871065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
817-1240
               

               
Cow position:
               
chr20:5634767-5634354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
822-977
               

               
Cow position:
               
chr20:25292920-25293073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
822-1248
               

               
Cow position:
               
chr20:35133283-35133701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
822-1248
               

               
Cow position:
               
chr20:40755735-40756176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
822-1255
               

               
Cow position:
               
chr20:21324437-21324864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
823-1221
               

               
Cow position:
               
chr20:28165404-28165793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
823-1255
               

               
Cow position:
               
chr20:3405650-3405227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
825-1248
               

               
Cow position:
               
chr20:2654811-2655231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
825-1248
               

               
Cow position:
               
chr20:14877867-14878277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 10
               

               
Conread position:
               
827-1164
               

               
Cow position:
               
chr20:1580956-1580615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
832-1155
               

               
Cow position:
               
chr20:41031519-41031842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
833-999
               

               
Cow position:
               
chr20:12442573-12442412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
833-1113
               

               
Cow position:
               
chr20:11888413-11888136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
833-1238
               

               
Cow position:
               
chr20:39044074-39043677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
833-1239
               

               
Cow position:
               
chr20:39603111-39602702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
833-1241
               

               
Cow position:
               
chr20:11516461-11516071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
833-1253
               

               
Cow position:
               
chr20:746295-746708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
833-1254
               

               
Cow position:
               
chr20:6239304-6238898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 24
               

               
Conread position:
               
833-1255
               

               
Cow position:
               
chr20:18970501-18970913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
835-1007
               

               
Cow position:
               
chr20:10494790-10494959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
835-1155
               

               
Cow position:
               
chr20:15539723-15539405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
835-1253
               

               
Cow position:
               
chr20:27565365-27565769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
835-1255
               

               
Cow position:
               
chr20:21018901-21019315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
836-1201
               

               
Cow position:
               
chr20:9587931-9588286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 34
               
UCSC Genome Browser

               
Conread position:
               
836-1251
               

               
Cow position:
               
chr20:41308637-41309039 (view  custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 57
               
UCSC Genome Browser

               
               
               
Conread position:
836-1255

               
               
               
Cow position:
chr20:7183375-7182957 (view  custom track)

               
               
               
Alignm length:
425

               
               
               
Alignm identity:
314

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
16, 50
UCSC Genome Browser

               
               
               
Conread position:
836-1255

               
               
               
Cow position:
chr20:13493077-13493487 (view  custom track)

               
               
               
Alignm length:
423

               
               
               
Alignm identity:
297

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
22, 54

               
               
               Conread position:837-1250
               
               
               Cow position:chr20:3308452-3308868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:275
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):15, 55

               
               
               Conread position:839-1231
               
               
               Cow position:chr20:12783013-12783397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):147, 49

               
               
               Conread position:841-1252
               
               
               Cow position:chr20:9474262-9473866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):271, 34

               
               
               Conread position:841-1255
               
               
               Cow position:chr20:20764500-20764904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:416
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):274, 48

               
               
               Conread position:842-1248
               
               
               Cow position:chr20:3451883-3452271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:269
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:842-1255
               
               
               Cow position:chr20:39270153-39269749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:416
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 48

               
               
               Conread position:843-1012
               
               
               Cow position:chr20:17668332-17668497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:844-1251
               
               
               Cow position:chr20:8870728-8870338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:411
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):8, 43

               
               
               Conread position:846-1255
               
               
               Cow position:chr20:14806240-14806635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:412
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 49

               
               
               Conread position:846-1255
               
               
               Cow position:chr20:18413216-18413607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:412
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 44

               
               
               Conread position:848-1103
               
               
               Cow position:chr20:30636852-30636605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:848-1255
               
               
               Cow position:chr20:13268966-13269375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):181, 23

               
               
               Conread position:850-1127
               
               
               Cow position:chr20:8362853-8362581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):102, 46

               
               
               Conread position:850-1254
               
               
               Cow position:chr20:11635403-11635022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:406
               
               
               Alignm identity:264
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):332, 30

               
               
               Conread position:854-1253
               
               
               Cow position:chr20:34407648-34407255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:259
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):166, 36

               
               
               Conread position:857-1245
               
               
               Cow position:chr20:32152876-32153245 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:265
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):126, 33

               
               
               Conread position:857-1253
               
               
               Cow position:chr20:9037158-9036785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:271
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):174, 32

               
               
               Conread position:857-1255
               
               
               Cow position:chr20:5181254-5181655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:284
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):144, 21

               
               
               Conread position:857-1255
               
               
               Cow position:chr20:18223214-18222828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 33

               
               
               Conread position:858-1240
               
               
               Cow position:chr20:4205250-4205611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:858-1255
               
               
               Cow position:chr20:8112175-8112564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 31

               
               
               Conread position:858-1255
               
               
               Cow position:chr20:11330807-11330420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):257, 31

               
               
               Conread position:858-1255
               
               
               Cow position:chr20:23679790-23679397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):86, 31

               
               
               Conread position:859-1255
               
               
               Cow position:chr20:41976801-41977172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:276
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):239, 33

               
               
               Conread position:864-1108
               
               
               Cow position:chr20:4620649-4620414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):25, 33

               
               
               Conread position:865-1253
               
               
               Cow position:chr20:24534084-24534475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:397
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):198, 23

               
               
               Conread position:868-1246
               
               
               Cow position:chr20:17831211-17831587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 117

               
               
               Conread position:869-1241
               
               
               Cow position:chr20:26415802-26415430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 20

               
               
               Conread position:869-1248
               
               
               Cow position:chr20:4788852-4788491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):246, 20

               
               
               Conread position:869-1255
               
               
               Cow position:chr20:38028628-38028243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):246, 22

               
               
               Conread position:872-1162
               
               
               Cow position:chr20:20546005-20546297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):73, 17

               
               
               Conread position:874-1092
               
               
               Cow position:chr20:11720321-11720536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:158
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:875-1040
               
               
               Cow position:chr20:8786711-8786872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:875-1098
               
               
               Cow position:chr20:24388507-24388288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:165
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:875-1110
               
               
               Cow position:chr20:7131737-7131965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:170
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:875-1248
               
               
               Cow position:chr20:8834119-8833754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:253
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):104, 14

               
               
               Conread position:875-1253
               
               
               Cow position:chr20:34900201-34900573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 15

               
               
               Conread position:875-1255
               
               
               Cow position:chr20:10919934-10919565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):235, 14

               
               
               Conread position:875-1255
               
               
               Cow position:chr20:33021296-33021666 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):240, 14

               
               
               Conread position:875-1255
               
               
               Cow position:chr20:35970325-35970693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):232, 14

               
               
               Conread position:877-1236
               
               
               Cow position:chr20:23849683-23850023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:253
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):60, 12

               
               
               Conread position:877-1255
               
               
               Cow position:chr20:13024782-13024416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):216, 18

               
               
               Conread position:882-1242
               
               
               Cow position:chr20:34286972-34287339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:249
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):24, 9

               
               
               Conread position:892-1248
               
               
               Cow position:chr20:3182325-3181986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:242
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):64, 226

               
               
               Conread position:893-1184
               
               
               Cow position:chr20:19046471-19046180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):222, 90

               
               
               Conread position:895-1206
               
               
               Cow position:chr20:29602286-29601982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:218
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:895-1244
               
               
               Cow position:chr20:33349403-33349064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:228
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):23, 12

               
               
               Conread position:895-1252
               
               
               Cow position:chr20:326160-326510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 88

               
               
               Conread position:895-1255
               
               
               Cow position:chr20:28888270-28888632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 95

               
               
               Conread position:895-1255
               
               
               Cow position:chr20:30908597-30908950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):220, 88

               
               
               Conread position:896-1139
               
               
               Cow position:chr20:27152228-27152471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:182
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):219, 87

               
               
               Conread position:898-1253
               
               
               Cow position:chr20:23681876-23681524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:250
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):216, 83

               
               
               Conread position:898-1255
               
               
               Cow position:chr20:18162427-18162777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):217, 85

               
               
               Conread position:900-1253
               
               
               Cow position:chr20:22027431-22027777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):213, 73

               
               
               Conread position:902-1110
               
               
               Cow position:chr20:8279931-8279731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:904-1255
               
               
               Cow position:chr20:20236212-20236542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:244
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:905-1139
               
               
               Cow position:chr20:7108080-7108311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:905-1163
               
               
               Cow position:chr20:30750216-30750464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:905-1201
               
               
               Cow position:chr20:38181981-38182266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:203
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):122, 18

               
               
               Conread position:905-1248
               
               
               Cow position:chr20:17479988-17479635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:249
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):187, 69

               
               
               Conread position:905-1255
               
               
               Cow position:chr20:13049013-13048667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:906-1243
               
               
               Cow position:chr20:12551824-12552161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):209, 278

               
               
               Conread position:907-1242
               
               
               Cow position:chr20:2015992-2015662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:224
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):208, 74

               
               
               Conread position:907-1248
               
               
               Cow position:chr20:29844450-29844788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):151, 65

               
               
               Conread position:911-1233
               
               
               Cow position:chr20:28464693-28465013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):204, 99

               
               
               Conread position:911-1241
               
               
               Cow position:chr20:9419564-9419244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):204, 72

               
               
               Conread position:911-1248
               
               
               Cow position:chr20:16157964-16157638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:230
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):203, 24

               
               
               Conread position:911-1248
               
               
               Cow position:chr20:27895832-27895509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:235
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):24, 63

               
               
               Conread position:913-1056
               
               
               Cow position:chr20:7592831-7592689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:913-1064
               
               
               Cow position:chr20:7568345-7568195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:913-1117
               
               
               Cow position:chr20:3501480-3501680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:151
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:913-1166
               
               
               Cow position:chr20:22659203-22658951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1190
               
               
               Cow position:chr20:22064094-22063823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):175, 70

               
               
               Conread position:913-1239
               
               
               Cow position:chr20:12155690-12155369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):201, 21

               
               
               Conread position:913-1242
               
               
               Cow position:chr20:10199780-10200104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):187, 70

               
               
               Conread position:913-1248
               
               
               Cow position:chr20:16407099-16407418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:229
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1248
               
               
               Cow position:chr20:24903200-24902873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):177, 70

               
               
               Conread position:913-1251
               
               
               Cow position:chr20:10338080-10338407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 39

               
               
               Conread position:913-1251
               
               
               Cow position:chr20:20438378-20438048 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr20:4911514-4911839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 60

               
               
               Conread position:913-1255
               
               
               Cow position:chr20:7757211-7756877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 70

               
               
               Conread position:913-1255
               
               
               Cow position:chr20:35036610-35036277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:250
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 59

               
               
               Conread position:913-1255
               
               
               Cow position:chr20:39875874-39875541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):107, 67

               
               
               Conread position:914-1255
               
               
               Cow position:chr20:3599981-3599642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):186, 20

               
               
               Conread position:915-1248
               
               
               Cow position:chr20:2818997-2819306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:234
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):200, 58

               
               
               Conread position:915-1255
               
               
               Cow position:chr20:14719324-14718990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 69

               
               
               Conread position:916-1230
               
               
               Cow position:chr20:10885532-10885230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:222
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):199, 58

               
               
               Conread position:916-1250
               
               
               Cow position:chr20:41688057-41688383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:232
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):199, 67

               
               
               Conread position:916-1255
               
               
               Cow position:chr20:12034300-12033966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):199, 67

               
               
               Conread position:917-1198
               
               
               Cow position:chr20:41474658-41474384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):198, 55

               
               
               Conread position:917-1219
               
               
               Cow position:chr20:26078980-26078692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):98, 66

               
               
               Conread position:918-1255
               
               
               Cow position:chr20:8482782-8482456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):197, 56

               
               
               Conread position:919-1255
               
               
               Cow position:chr20:9509508-9509179 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):196, 64

               
               
               Conread position:920-1104
               
               
               Cow position:chr20:3105232-3105414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:920-1163
               
               
               Cow position:chr20:34202071-34202314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):195, 141

               
               
               Conread position:920-1216
               
               
               Cow position:chr20:4668368-4668654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:218
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):195, 60

               
               
               Conread position:920-1248
               
               
               Cow position:chr20:28759330-28759637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:218
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:920-1255
               
               
               Cow position:chr20:13877288-13876958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):192, 225

               
               
               Conread position:921-1255
               
               
               Cow position:chr20:7807141-7806812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 231

               
               
               Conread position:924-1255
               
               
               Cow position:chr20:581496-581178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:237
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):118, 59

               
               
               Conread position:925-1212
               
               
               Cow position:chr20:41698539-41698259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:210
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):12, 59

               
               
               Conread position:925-1217
               
               
               Cow position:chr20:13384952-13385243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):190, 167

               
               
               Conread position:927-1255
               
               
               Cow position:chr20:11389946-11389633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:930-1248
               
               
               Cow position:chr20:33540310-33540621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):185, 53

               
               
               Conread position:933-1255
               
               
               Cow position:chr20:20471156-20471472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):182, 55

               
               
               Conread position:936-1228
               
               
               Cow position:chr20:36439761-36439470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):86, 44

               
               
               Conread position:936-1240
               
               
               Cow position:chr20:20898647-20898943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):179, 47

               
               
               Conread position:936-1253
               
               
               Cow position:chr20:20360377-20360062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):179, 55

               
               
               Conread position:936-1255
               
               
               Cow position:chr20:9993960-9994272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:224
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):179, 47

               
               
               Conread position:936-1255
               
               
               Cow position:chr20:14926085-14926396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):179, 47

               
               
               Conread position:936-1255
               
               
               Cow position:chr20:19410922-19410615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:231
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):88, 18

               
               
               Conread position:937-1246
               
               
               Cow position:chr20:8910349-8910646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:218
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):178, 46

               
               
               Conread position:943-1118
               
               
               Cow position:chr20:25562947-25562773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):169, 31

               
               
               Conread position:943-1255
               
               
               Cow position:chr20:12839503-12839808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 49

               
               
               Conread position:943-1255
               
               
               Cow position:chr20:14756634-14756317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:226
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):47, 224

               
               
               Conread position:943-1255
               
               
               Cow position:chr20:38488439-38488745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:220
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):156, 40

               
               
               Conread position:944-1255
               
               
               Cow position:chr20:13114987-13114682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:191
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):171, 201

               
               
               Conread position:948-1255
               
               
               Cow position:chr20:24347479-24347180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 35

               
               
               Conread position:950-1192
               
               
               Cow position:chr20:26995172-26995409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):43, 23

               
               
               Conread position:951-1255
               
               
               Cow position:chr20:26597527-26597824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:216
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):164, 32

               
               
               Conread position:952-1248
               
               
               Cow position:chr20:2942127-2941832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:202
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):136, 31

               
               
               Conread position:952-1255
               
               
               Cow position:chr20:15437419-15437715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):192, 74

               
               
               Conread position:954-1255
               
               
               Cow position:chr20:7527906-7527609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):161, 37

               
               
               Conread position:954-1255
               
               
               Cow position:chr20:10818766-10818477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):159, 26

               
               
               Conread position:955-1253
               
               
               Cow position:chr20:4756365-4756074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):160, 28

               
               
               Conread position:955-1255
               
               
               Cow position:chr20:10538781-10539071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):160, 36

               
               
               Conread position:955-1262
               
               
               Cow position:chr20:17734319-17734013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:224
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):41, 7

               
               
               Conread position:956-1142
               
               
               Cow position:chr20:4950135-4949950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):159, 27

               
               
               Conread position:956-1225
               
               
               Cow position:chr20:25686886-25686615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):99, 6

               
               
               Conread position:957-1255
               
               
               Cow position:chr20:7710746-7710457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:213
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):148, 26

               
               
               Conread position:958-1253
               
               
               Cow position:chr20:39425690-39425405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):159, 22

               
               
               Conread position:962-1216
               
               
               Cow position:chr20:8020615-8020362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):63, 21

               
               
               Conread position:962-1236
               
               
               Cow position:chr20:847561-847286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:195
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):145, 21

               
               
               Conread position:962-1255
               
               
               Cow position:chr20:25297124-25296834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:206
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):16, 200

               
               
               Conread position:966-1251
               
               
               Cow position:chr20:22695935-22695653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):149, 84

               
               
               Conread position:969-1162
               
               
               Cow position:chr20:5999148-5998955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):146, 190

               
               
               Conread position:969-1255
               
               
               Cow position:chr20:15821786-15822071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:205
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):121, 14

               
               
               Conread position:973-1179
               
               
               Cow position:chr20:42137863-42138067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:144
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):142, 30

               
               
               Conread position:973-1233
               
               
               Cow position:chr20:13955514-13955773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):139, 185

               
               
               Conread position:973-1245
               
               
               Cow position:chr20:19667414-19667683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):142, 16

               
               
               Conread position:973-1251
               
               
               Cow position:chr20:4895421-4895149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):191, 18

               
               
               Conread position:973-1253
               
               
               Cow position:chr20:4621862-4621592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):201, 141

               
               
               Conread position:973-1255
               
               
               Cow position:chr20:3159765-3160045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):48, 58

               
               
               Conread position:973-1255
               
               
               Cow position:chr20:28439552-28439827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):142, 54

               
               
               Conread position:973-1255
               
               
               Cow position:chr20:34239810-34240079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):141, 94

               
               
               Conread position:974-1231
               
               
               Cow position:chr20:398814-398564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):141, 172

               
               
               Conread position:975-1253
               
               
               Cow position:chr20:13063573-13063851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):115, 48

               
               
               Conread position:975-1255
               
               
               Cow position:chr20:39515781-39515507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):140, 170

               
               
               Conread position:983-1124
               
               
               Cow position:chr20:23505340-23505484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:111
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:983-1253
               
               
               Cow position:chr20:4655548-4655814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):143, 40

               
               
               Conread position:983-1255
               
               
               Cow position:chr20:1514944-1514674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):16, 65

               
               
               Conread position:984-1255
               
               
               Cow position:chr20:13501410-13501686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):109, 93

               
               
               Conread position:985-1142
               
               
               Cow position:chr20:5119828-5119672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):127, 77

               
               
               Conread position:985-1248
               
               
               Cow position:chr20:1990247-1989997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):97, 126

               
               
               Conread position:985-1248
               
               
               Cow position:chr20:13659843-13659579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):54, 62

               
               
               Conread position:985-1255
               
               
               Cow position:chr20:11549851-11550116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):42, 175

               
               
               Conread position:985-1255
               
               
               Cow position:chr20:19363875-19363612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):127, 177

               
               
               Conread position:985-1255
               
               
               Cow position:chr20:40512307-40512037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:195
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):33, 105

               
               
               Conread position:986-1253
               
               
               Cow position:chr20:5675957-5676223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):129, 180

               
               
               Conread position:986-1255
               
               
               Cow position:chr20:23332439-23332169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):107, 98

               
               
               Conread position:987-1255
               
               
               Cow position:chr20:6447556-6447291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:187
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):128, 195

               
               
               Conread position:988-1255
               
               
               Cow position:chr20:11171378-11171639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):5, 140

               
               
               Conread position:991-1240
               
               
               Cow position:chr20:28067894-28067653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):90, 38

               
               
               Conread position:992-1251
               
               
               Cow position:chr20:7442660-7442398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):121, 200

               
               
               Conread position:992-1255
               
               
               Cow position:chr20:5104941-5104684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):123, 162

               
               
               Conread position:992-1255
               
               
               Cow position:chr20:10497707-10497450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):123, 167

               
               
               Conread position:992-1255
               
               
               Cow position:chr20:12442202-12441941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):122, 37

               
               
               Conread position:992-1255
               
               
               Cow position:chr20:29308301-29308044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):123, 153

               
               
               Conread position:997-1248
               
               
               Cow position:chr20:22446139-22445893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):115, 159

               
               
               Conread position:997-1255
               
               
               Cow position:chr20:34099557-34099315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):117, 148

               
               
               Conread position:1002-1255
               
               
               Cow position:chr20:13817348-13817600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):113, 180

               
               
               Conread position:1003-1127
               
               
               Cow position:chr20:20351349-20351225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):11, 26

               
               
               Conread position:1003-1212
               
               
               Cow position:chr20:12684661-12684455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:153
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):26, 138

               
               
               Conread position:1003-1221
               
               
               Cow position:chr20:8869778-8869558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):11, 181

               
               
               Conread position:1003-1255
               
               
               Cow position:chr20:4672430-4672681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:191
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):39, 143

               
               
               Conread position:1003-1266
               
               
               Cow position:chr20:24098942-24099198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:177
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):112, 26

               
               
               Conread position:1004-1255
               
               
               Cow position:chr20:3781927-3781681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):111, 148

               
               
               Conread position:1005-1255
               
               
               Cow position:chr20:35690304-35690056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):109, 23

               
               
               Conread position:1007-1244
               
               
               Cow position:chr20:5939468-5939236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):108, 138

               
               
               Conread position:1007-1252
               
               
               Cow position:chr20:886462-886705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):108, 12

               
               
               Conread position:1008-1248
               
               
               Cow position:chr20:22313647-22313417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):107, 137

               
               
               Conread position:1009-1248
               
               
               Cow position:chr20:6096972-6096742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):106, 20

               
               
               Conread position:1012-1208
               
               
               Cow position:chr20:41419688-41419882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):103, 114

               
               
               Conread position:1013-1236
               
               
               Cow position:chr20:13094515-13094289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):102, 170

               
               
               Conread position:1013-1255
               
               
               Cow position:chr20:34836349-34836114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):102, 16

               
               
               Conread position:1014-1248
               
               
               Cow position:chr20:14735170-14735403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:173
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):101, 168

               
               
               Conread position:1014-1255
               
               
               Cow position:chr20:33994499-33994264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):101, 131

               
               
               Conread position:1016-1222
               
               
               Cow position:chr20:12206588-12206387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):89, 142

               
               
               Conread position:1023-1239
               
               
               Cow position:chr20:38935684-38935475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):92, 122

               
               
               Conread position:1023-1245
               
               
               Cow position:chr20:5668983-5668762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):99, 159

               
               
               Conread position:1023-1255
               
               
               Cow position:chr20:11614519-11614293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:175
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):89, 134

               
               
               Conread position:1023-1255
               
               
               Cow position:chr20:18185099-18185329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):92, 23

               
               
               Conread position:1023-1255
               
               
               Cow position:chr20:18529966-18530196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):60, 48

               
               
               Conread position:1023-1255
               
               
               Cow position:chr20:26683863-26683639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):91, 68

               
               
               Conread position:1023-1255
               
               
               Cow position:chr20:32846877-32847102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):91, 122

               
               
               Conread position:1023-1266
               
               
               Cow position:chr20:24391526-24391761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:1025-1255
               
               
               Cow position:chr20:3745149-3745373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):90, 120

               
               
               Conread position:1026-1255
               
               
               Cow position:chr20:39023497-39023274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):86, 119

               
               
               Conread position:1029-1253
               
               
               Cow position:chr20:16587015-16586796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:1029-1255
               
               
               Cow position:chr20:4950890-4950670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):86, 131

               
               
               Conread position:1030-1239
               
               
               Cow position:chr20:25352664-25352455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:150
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):47, 87

               
               
               Conread position:1031-1231
               
               
               Cow position:chr20:12584954-12584760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:148
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):83, 114

               
               
               Conread position:1031-1253
               
               
               Cow position:chr20:24209510-24209730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:171
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):86, 66

               
               
               Conread position:1031-1255
               
               
               Cow position:chr20:4893386-4893163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:165
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):37, 19

               
               
               Conread position:1031-1255
               
               
               Cow position:chr20:5644355-5644580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):81, 60

               
               
               Conread position:1031-1255
               
               
               Cow position:chr20:19653770-19653552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):84, 114

               
               
               Conread position:1031-1255
               
               
               Cow position:chr20:26881399-26881171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):84, 156

               
               
               Conread position:1032-1175
               
               
               Cow position:chr20:6602421-6602564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):83, 59

               
               
               Conread position:1032-1248
               
               
               Cow position:chr20:25293100-25293306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:1033-1252
               
               
               Cow position:chr20:26076616-26076835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:171
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):82, 117

               
               
               Conread position:1033-1255
               
               
               Cow position:chr20:4746428-4746212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):82, 112

               
               
               Conread position:1036-1256
               
               
               Cow position:chr20:32866808-32866595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):56, 104

               
               
               Conread position:1037-1255
               
               
               Cow position:chr20:1191430-1191642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):78, 122

               
               
               Conread position:1038-1246
               
               
               Cow position:chr20:9066377-9066584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):77, 132

               
               
               Conread position:1038-1250
               
               
               Cow position:chr20:26469537-26469333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:1041-1255
               
               
               Cow position:chr20:9014805-9014598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):74, 5

               
               
               Conread position:1044-1204
               
               
               Cow position:chr20:36883441-36883601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):34, 55

               
               
               Conread position:1050-1255
               
               
               Cow position:chr20:9267576-9267371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):65, 135

               
               
               Conread position:1050-1255
               
               
               Cow position:chr20:37439181-37439380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):66, 95

               
               
               Conread position:1055-1252
               
               
               Cow position:chr20:774674-774483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):60, 90

               
               
               Conread position:1058-1255
               
               
               Cow position:chr20:21952783-21952974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):58, 87

               
               
               Conread position:1061-1255
               
               
               Cow position:chr20:7568020-7567827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):54, 120

               
               
               Conread position:1061-1255
               
               
               Cow position:chr20:7592506-7592313 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):54, 120

               
               
               Conread position:1062-1255
               
               
               Cow position:chr20:15079096-15078909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):54, 83

               
               
               Conread position:1063-1253
               
               
               Cow position:chr20:15076579-15076766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):31, 51

               
               
               Conread position:1066-1255
               
               
               Cow position:chr20:23065276-23065087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:139
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):49, 117

               
               
               Conread position:1067-1255
               
               
               Cow position:chr20:10850949-10850764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):48, 37

               
               
               Conread position:1068-1253
               
               
               Cow position:chr20:16714973-16715151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):44, 83

               
               
               Conread position:1068-1255
               
               
               Cow position:chr20:6549899-6549718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):47, 92

               
               
               Conread position:1070-1248
               
               
               Cow position:chr20:35011299-35011121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):45, 56

               
               
               Conread position:1078-1255
               
               
               Cow position:chr20:13828631-13828802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):37, 82

               
               
               Conread position:1079-1255
               
               
               Cow position:chr20:3891617-3891800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):33, 111

               
               
               Conread position:1080-1254
               
               
               Cow position:chr20:25822803-25822977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):35, 103

               
               
               Conread position:1080-1255
               
               
               Cow position:chr20:14832045-14831871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):5, 81

               
               
               Conread position:1084-1255
               
               
               Cow position:chr20:36780150-36779980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):31, 99

               
               
               Conread position:1089-1253
               
               
               Cow position:chr20:13821998-13821834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):27, 93

               
               
               Conread position:1096-1255
               
               
               Cow position:chr20:23833728-23833886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):55, 86

               
               
               Conread position:1116-1255
               
               
               Cow position:chr20:20966975-20967107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:107
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:1127-1255
               
               
               Cow position:chr20:23164249-23164122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:100
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):55, 0
Show alignments to all cow chromosomes.