Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B080021.5

Conread position: 474-654
Cow position: chrX:29908113-29907934 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 474-658
Cow position: chrX:19877907-19878085 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 5

Conread position: 474-670
Cow position: chrX:28866923-28866728 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 474-670
Cow position: chrX:39560570-39560368 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 14

Conread position: 475-652
Cow position: chrX:6201621-6201792 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 8

Conread position: 477-648
Cow position: chrX:14782254-14782083 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 477-654
Cow position: chrX:40581073-40580895 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 481-654
Cow position: chrX:14801724-14801552 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 0

Conread position: 481-654
Cow position: chrX:37404139-37403966 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 481-661
Cow position: chrX:16465397-16465576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 481-670
Cow position: chrX:20790445-20790257 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 0

Conread position: 483-1039
Cow position: chrX:43074980-43075523 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 305

Conread position: 485-651
Cow position: chrX:39556697-39556530 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 485-670
Cow position: chrX:28633364-28633187 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 485-670
Cow position: chrX:40070514-40070327 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 83

Conread position: 486-671
Cow position: chrX:4751266-4751085 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 488-670
Cow position: chrX:45400918-45400733 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 51

Conread position: 491-654
Cow position: chrX:39548504-39548667 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-670
Cow position: chrX:31495842-31496020 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 491-678
Cow position: chrX:18247462-18247645 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 47

Conread position: 492-606
Cow position: chrX:16803761-16803647 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 492-654
Cow position: chrX:28753230-28753072 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 492-658
Cow position: chrX:16808708-16808542 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 492-667
Cow position: chrX:22819184-22819359 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 494-597
Cow position: chrX:38998941-38999042 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 494-606
Cow position: chrX:3827775-3827887 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 494-629
Cow position: chrX:5427368-5427503 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-631
Cow position: chrX:7120715-7120852 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 129, 121

Conread position: 494-638
Cow position: chrX:9128163-9128308 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 494-638
Cow position: chrX:10528678-10528534 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 42

Conread position: 494-638
Cow position: chrX:22612511-22612655 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-638
Cow position: chrX:27750356-27750499 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 494-645
Cow position: chrX:4622845-4622694 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-646
Cow position: chrX:13912201-13912352 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 494-648
Cow position: chrX:5280744-5280591 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 142, 62

Conread position: 494-648
Cow position: chrX:5866254-5866408 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 494-649
Cow position: chrX:3418028-3417874 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 494-649
Cow position: chrX:5392467-5392312 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-649
Cow position: chrX:9011439-9011590 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 494-649
Cow position: chrX:9642324-9642169 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-649
Cow position: chrX:16046255-16046410 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-649
Cow position: chrX:24468015-24467861 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 494-649
Cow position: chrX:26618232-26618387 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-649
Cow position: chrX:29912447-29912602 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 62

Conread position: 494-649
Cow position: chrX:30196406-30196560 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 494-650
Cow position: chrX:8482555-8482711 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 129

Conread position: 494-650
Cow position: chrX:13928634-13928478 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-651
Cow position: chrX:8516706-8516863 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-651
Cow position: chrX:17891654-17891811 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-653
Cow position: chrX:34094814-34094973 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:2103513-2103673 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:2159873-2160033 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:2579527-2579687 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:3082022-3081863 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 494-654
Cow position: chrX:3372744-3372585 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 494-654
Cow position: chrX:5124251-5124091 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:5289576-5289418 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 494-654
Cow position: chrX:5332325-5332165 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:5334707-5334547 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:5361118-5361278 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:6044352-6044200 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 494-654
Cow position: chrX:6372288-6372448 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:6453805-6453965 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:6870456-6870296 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:7484915-7485075 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:8529648-8529808 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:11146225-11146065 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:11499668-11499508 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:12145207-12145370 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 494-654
Cow position: chrX:12359996-12360156 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:13031103-13030943 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:13206063-13206220 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 494-654
Cow position: chrX:14050086-14049926 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:14125136-14124978 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 494-654
Cow position: chrX:14462423-14462582 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 494-654
Cow position: chrX:15091656-15091500 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 494-654
Cow position: chrX:15977845-15977685 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:16087015-16086855 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:17054676-17054837 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 494-654
Cow position: chrX:17290288-17290448 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:17994567-17994727 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:18023884-18023724 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:18222522-18222681 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 494-654
Cow position: chrX:18656697-18656537 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:19109933-19109773 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:19398886-19399046 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:19608783-19608944 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 494-654
Cow position: chrX:20020687-20020847 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:20356887-20356727 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:21343503-21343663 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:21685727-21685887 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:22077234-22077074 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:22838380-22838540 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:24346157-24346317 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:25289571-25289411 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:26230650-26230490 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:26275247-26275406 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 494-654
Cow position: chrX:26760460-26760300 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:27758817-27758975 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 494-654
Cow position: chrX:28058430-28058590 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:28503444-28503604 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:28588078-28588239 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 494-654
Cow position: chrX:29083175-29083335 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:30053360-30053200 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:30199884-30199724 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:30836495-30836655 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:32064060-32063903 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 127

Conread position: 494-654
Cow position: chrX:33685239-33685399 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:34518834-34518994 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:35532963-35533122 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 494-654
Cow position: chrX:36535623-36535467 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 494-654
Cow position: chrX:37080410-37080251 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 126, 0

Conread position: 494-654
Cow position: chrX:37852244-37852404 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:38231159-38230999 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:38961742-38961582 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-654
Cow position: chrX:39185281-39185441 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-655
Cow position: chrX:21662150-21662306 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 60

Conread position: 494-655
Cow position: chrX:47000546-47000384 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 494-658
Cow position: chrX:15260511-15260347 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-658
Cow position: chrX:20792250-20792408 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 494-658
Cow position: chrX:29225586-29225750 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-658
Cow position: chrX:37134525-37134361 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 494-658
Cow position: chrX:41527406-41527242 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-663
Cow position: chrX:39939645-39939476 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-665
Cow position: chrX:29880172-29880001 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 494-666
Cow position: chrX:3155475-3155305 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 64

Conread position: 494-666
Cow position: chrX:18455662-18455490 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 494-666
Cow position: chrX:29700835-29700672 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 111, 0

Conread position: 494-667
Cow position: chrX:11744376-11744548 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 494-667
Cow position: chrX:20503749-20503921 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 494-667
Cow position: chrX:20800897-20801064 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 74

Conread position: 494-667
Cow position: chrX:24174844-24174672 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 494-667
Cow position: chrX:25204444-25204617 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 494-667
Cow position: chrX:26508336-26508506 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 494-667
Cow position: chrX:33822198-33822371 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 116

Conread position: 494-667
Cow position: chrX:37118017-37118191 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 494-667
Cow position: chrX:40365637-40365464 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 494-669
Cow position: chrX:620156-619981 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 86

Conread position: 494-670
Cow position: chrX:671885-671709 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:2008590-2008418 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 68

Conread position: 494-670
Cow position: chrX:2293492-2293316 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:2382575-2382751 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 162

Conread position: 494-670
Cow position: chrX:2649241-2649066 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 97

Conread position: 494-670
Cow position: chrX:4342859-4343035 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:4406991-4407167 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:10059573-10059749 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:10412867-10412692 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 145, 0

Conread position: 494-670
Cow position: chrX:11409226-11409050 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:11566022-11566198 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:12178782-12178963 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 494-670
Cow position: chrX:12651712-12651537 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 494-670
Cow position: chrX:15621423-15621248 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 494-670
Cow position: chrX:16085550-16085374 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:16278764-16278936 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 494-670
Cow position: chrX:17782608-17782784 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:20652521-20652699 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 45

Conread position: 494-670
Cow position: chrX:20999161-20998993 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 494-670
Cow position: chrX:21626591-21626411 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 125, 11

Conread position: 494-670
Cow position: chrX:22125747-22125571 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 55

Conread position: 494-670
Cow position: chrX:22810998-22811174 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:23317303-23317128 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 494-670
Cow position: chrX:24109496-24109321 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 151, 0

Conread position: 494-670
Cow position: chrX:25459531-25459354 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 113, 127

Conread position: 494-670
Cow position: chrX:27305037-27305213 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:28313533-28313709 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:30964878-30964702 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:31372570-31372746 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 146

Conread position: 494-670
Cow position: chrX:31728576-31728744 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 494-670
Cow position: chrX:32643594-32643770 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:33583802-33583974 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 494-670
Cow position: chrX:34564203-34564375 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 494-670
Cow position: chrX:34761174-34761350 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:35287534-35287709 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 494-670
Cow position: chrX:36195204-36195376 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 494-670
Cow position: chrX:36479527-36479351 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:36729492-36729668 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:38330492-38330666 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 494-670
Cow position: chrX:39731029-39730855 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 494-670
Cow position: chrX:42732980-42733156 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:44901249-44901419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 494-670
Cow position: chrX:45236574-45236750 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 494-670
Cow position: chrX:46296770-46296944 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 494-671
Cow position: chrX:23969462-23969635 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 494-671
Cow position: chrX:25405264-25405085 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 494-671
Cow position: chrX:27423174-27422998 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 494-671
Cow position: chrX:30172598-30172422 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 494-671
Cow position: chrX:33803887-33803710 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 494-671
Cow position: chrX:35937967-35937791 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 494-672
Cow position: chrX:16325418-16325242 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 494-672
Cow position: chrX:23415587-23415409 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 494-672
Cow position: chrX:25847909-25848087 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 137

Conread position: 494-672
Cow position: chrX:31261525-31261347 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 118

Conread position: 494-673
Cow position: chrX:3211428-3211249 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 55

Conread position: 494-673
Cow position: chrX:13178499-13178320 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 119, 16

Conread position: 494-673
Cow position: chrX:27450941-27450762 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 494-674
Cow position: chrX:27070954-27071133 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 174, 41

Conread position: 494-676
Cow position: chrX:30089938-30089755 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 173, 0

Conread position: 494-738
Cow position: chrX:33763253-33763497 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 495-606
Cow position: chrX:9763962-9763851 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 495-607
Cow position: chrX:11819563-11819451 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 495-615
Cow position: chrX:27497938-27498058 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 495-618
Cow position: chrX:22493140-22493263 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 495-636
Cow position: chrX:40184182-40184323 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-637
Cow position: chrX:23280133-23280275 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-648
Cow position: chrX:7755015-7755167 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 495-648
Cow position: chrX:17889751-17889598 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 133, 125

Conread position: 495-649
Cow position: chrX:10445306-10445152 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-649
Cow position: chrX:24280029-24280183 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 495-650
Cow position: chrX:27754537-27754691 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 495-650
Cow position: chrX:47380394-47380236 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 495-651
Cow position: chrX:1056278-1056121 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 495-652
Cow position: chrX:15122052-15121896 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 495-654
Cow position: chrX:2048221-2048380 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:6406462-6406619 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 110

Conread position: 495-654
Cow position: chrX:15113781-15113940 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:16359898-16359739 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:21254888-21255047 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:23221933-23221777 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 495-654
Cow position: chrX:24769747-24769589 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 495-654
Cow position: chrX:26974019-26974178 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:29759797-29759956 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:31978732-31978573 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-654
Cow position: chrX:41156420-41156579 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:5354193-5354031 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 495-658
Cow position: chrX:16702780-16702943 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:16711065-16711228 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:18193799-18193962 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:18898540-18898377 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:18950627-18950464 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:21414976-21415139 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:21582552-21582715 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:23387429-23387266 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:23395716-23395879 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:24442130-24441967 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:27318340-27318503 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:29099526-29099689 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:29849514-29849357 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 495-658
Cow position: chrX:29892196-29892359 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-658
Cow position: chrX:29916236-29916074 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 0

Conread position: 495-658
Cow position: chrX:30059996-30060161 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 124

Conread position: 495-658
Cow position: chrX:35239981-35240138 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 495-658
Cow position: chrX:38150797-38150960 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 495-663
Cow position: chrX:16782389-16782557 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-665
Cow position: chrX:323023-323193 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-665
Cow position: chrX:2323816-2323986 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 495-665
Cow position: chrX:9899229-9899065 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 495-665
Cow position: chrX:24588625-24588457 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 495-665
Cow position: chrX:26531082-26531252 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 495-665
Cow position: chrX:32584822-32584652 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-667
Cow position: chrX:20674977-20675149 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 495-667
Cow position: chrX:28156641-28156812 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 495-667
Cow position: chrX:40560431-40560260 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 495-670
Cow position: chrX:150581-150755 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 495-670
Cow position: chrX:865505-865680 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:3406234-3406057 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 495-670
Cow position: chrX:4905878-4905706 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 495-670
Cow position: chrX:7551692-7551517 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:10301237-10301412 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 75

Conread position: 495-670
Cow position: chrX:11976337-11976162 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:12307653-12307478 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 125

Conread position: 495-670
Cow position: chrX:12310280-12310105 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:13406177-13406006 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 495-670
Cow position: chrX:14162301-14162476 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:16040570-16040395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:16525899-16526074 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:20953642-20953817 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:21389687-21389862 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:21793699-21793875 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 495-670
Cow position: chrX:22538924-22538749 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:22579278-22579103 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:22869928-22870106 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 495-670
Cow position: chrX:22887771-22887943 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 495-670
Cow position: chrX:23572708-23572532 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 495-670
Cow position: chrX:23986359-23986534 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:24316931-24317106 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 80

Conread position: 495-670
Cow position: chrX:24483254-24483083 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 495-670
Cow position: chrX:25282385-25282209 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 495-670
Cow position: chrX:27095238-27095413 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:27615921-27616092 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 495-670
Cow position: chrX:28624651-28624477 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 133, 40

Conread position: 495-670
Cow position: chrX:30180815-30180643 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 495-670
Cow position: chrX:30229004-30228830 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 0

Conread position: 495-670
Cow position: chrX:35024174-35024343 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 495-670
Cow position: chrX:36691942-36692117 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 54

Conread position: 495-670
Cow position: chrX:39293109-39292934 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:39713660-39713835 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 495-670
Cow position: chrX:45373999-45373824 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 495-671
Cow position: chrX:16021267-16021091 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 495-671
Cow position: chrX:22118385-22118210 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 138, 125

Conread position: 495-671
Cow position: chrX:23341882-23341706 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 495-671
Cow position: chrX:25573461-25573633 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 110

Conread position: 495-671
Cow position: chrX:27704708-27704884 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 495-671
Cow position: chrX:38852270-38852445 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 144, 0

Conread position: 495-672
Cow position: chrX:1550074-1550252 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 169, 0

Conread position: 495-672
Cow position: chrX:40268590-40268771 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 102

Conread position: 495-672
Cow position: chrX:42222664-42222489 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 165, 0

Conread position: 495-673
Cow position: chrX:8144769-8144590 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 61

Conread position: 495-673
Cow position: chrX:15039961-15039783 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 28

Conread position: 495-673
Cow position: chrX:15140427-15140249 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 495-673
Cow position: chrX:23038875-23038698 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 166, 28

Conread position: 495-673
Cow position: chrX:28647160-28646984 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 495-674
Cow position: chrX:11855274-11855455 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 495-675
Cow position: chrX:7572500-7572676 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 172, 96

Conread position: 495-676
Cow position: chrX:32145146-32144973 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 172, 62

Conread position: 495-681
Cow position: chrX:2479519-2479327 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 496-606
Cow position: chrX:42466884-42466774 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 496-618
Cow position: chrX:6279493-6279371 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 496-636
Cow position: chrX:39697873-39698011 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 496-650
Cow position: chrX:29766106-29766264 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 496-651
Cow position: chrX:21063583-21063736 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 496-654
Cow position: chrX:2486522-2486364 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:2559850-2559692 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:3360931-3361089 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:6581045-6581202 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 496-654
Cow position: chrX:12346006-12346164 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:14459057-14458899 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:14597956-14598114 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 496-654
Cow position: chrX:40225130-40224976 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 496-658
Cow position: chrX:11950376-11950214 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 496-658
Cow position: chrX:15993554-15993716 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 496-665
Cow position: chrX:18244095-18244264 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 496-665
Cow position: chrX:30135232-30135068 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 496-666
Cow position: chrX:19929544-19929715 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 496-667
Cow position: chrX:509034-508865 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 31

Conread position: 496-667
Cow position: chrX:7805491-7805660 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 496-667
Cow position: chrX:24006719-24006548 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 496-667
Cow position: chrX:33537690-33537856 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 496-667
Cow position: chrX:34221875-34222046 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 496-667
Cow position: chrX:38218087-38218258 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 496-667
Cow position: chrX:41791605-41791434 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:4482072-4482240 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 496-670
Cow position: chrX:5320606-5320433 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 496-670
Cow position: chrX:5646994-5646820 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:8590692-8590866 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:11991038-11990866 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 496-670
Cow position: chrX:12465142-12465316 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:18488604-18488430 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:20363034-20362858 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 20

Conread position: 496-670
Cow position: chrX:21226587-21226761 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:23022423-23022597 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:23452335-23452161 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:26447196-26447363 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 496-670
Cow position: chrX:27590920-27590746 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:27977724-27977550 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:28133208-28133379 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 496-670
Cow position: chrX:30159880-30159707 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 496-670
Cow position: chrX:30164128-30163954 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:31201952-31202125 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 496-670
Cow position: chrX:34442332-34442158 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 496-670
Cow position: chrX:38228207-38228029 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 496-670
Cow position: chrX:38935532-38935706 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 496-671
Cow position: chrX:17663806-17663633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 496-671
Cow position: chrX:30681394-30681219 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 496-671
Cow position: chrX:41847420-41847244 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 170, 0

Conread position: 496-673
Cow position: chrX:22809359-22809544 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 496-674
Cow position: chrX:4995720-4995897 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 173, 0

Conread position: 496-676
Cow position: chrX:6766625-6766445 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 497-619
Cow position: chrX:17793963-17794084 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 61

Conread position: 497-635
Cow position: chrX:45042539-45042679 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 497-651
Cow position: chrX:10866752-10866604 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 497-652
Cow position: chrX:30455510-30455355 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 497-654
Cow position: chrX:45903288-45903445 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 122, 126

Conread position: 497-655
Cow position: chrX:26622709-26622553 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 38

Conread position: 497-667
Cow position: chrX:29288109-29288274 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 497-670
Cow position: chrX:1617123-1616949 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 169, 0

Conread position: 497-670
Cow position: chrX:2524621-2524449 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 497-670
Cow position: chrX:6235740-6235572 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 497-670
Cow position: chrX:21592402-21592575 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 497-670
Cow position: chrX:28879482-28879309 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 58

Conread position: 497-800
Cow position: chrX:25817718-25817412 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 122

Conread position: 498-654
Cow position: chrX:2813370-2813214 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 498-654
Cow position: chrX:5248499-5248653 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 498-665
Cow position: chrX:29942269-29942435 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 498-667
Cow position: chrX:37488840-37489010 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 498-670
Cow position: chrX:13414693-13414522 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 498-670
Cow position: chrX:15151563-15151391 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 498-670
Cow position: chrX:35388807-35388635 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 498-670
Cow position: chrX:40693617-40693445 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 498-672
Cow position: chrX:6543377-6543550 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 165, 21

Conread position: 499-650
Cow position: chrX:5365481-5365330 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 502-669
Cow position: chrX:24425399-24425232 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 508-667
Cow position: chrX:35847347-35847506 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 508-672
Cow position: chrX:8104158-8103996 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 509-654
Cow position: chrX:20032708-20032563 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 509-658
Cow position: chrX:19657620-19657769 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 509-665
Cow position: chrX:3649699-3649544 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 509-667
Cow position: chrX:1729734-1729577 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 14

Conread position: 509-667
Cow position: chrX:39701978-39702135 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 509-670
Cow position: chrX:22601287-22601127 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 509-676
Cow position: chrX:37832340-37832177 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 510-649
Cow position: chrX:9535890-9536022 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 61

Conread position: 510-650
Cow position: chrX:9837255-9837386 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 511-670
Cow position: chrX:13069618-13069459 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 104, 99

Conread position: 511-670
Cow position: chrX:13090179-13090020 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 104, 99

Conread position: 512-670
Cow position: chrX:2300008-2300165 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 512-670
Cow position: chrX:12289848-12290006 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 31

Conread position: 512-670
Cow position: chrX:44193314-44193156 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 106, 94

Conread position: 513-671
Cow position: chrX:39559230-39559078 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 515-670
Cow position: chrX:24174032-24173877 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 516-670
Cow position: chrX:12996734-12996580 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 516-670
Cow position: chrX:36839836-36839990 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 517-658
Cow position: chrX:34008882-34009023 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 517-670
Cow position: chrX:16688399-16688552 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 523-665
Cow position: chrX:27628989-27629133 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 523-667
Cow position: chrX:41734054-41733909 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 523-671
Cow position: chrX:13430653-13430505 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 144

Conread position: 523-676
Cow position: chrX:5639788-5639643 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 525-670
Cow position: chrX:22308438-22308293 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 525-670
Cow position: chrX:33827900-33827746 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 525-671
Cow position: chrX:25360190-25360336 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 16

Conread position: 527-667
Cow position: chrX:38140895-38140756 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 535-651
Cow position: chrX:160579-160695 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 538-666
Cow position: chrX:40788287-40788414 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 550-670
Cow position: chrX:11083442-11083322 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-1253
Cow position: chrX:502534-501848 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 567-670
Cow position: chrX:16517951-16517848 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 765-1142
Cow position: chrX:21255028-21255404 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 768-1197
Cow position: chrX:487794-488220 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 769-1255
Cow position: chrX:362199-361719 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 771-1255
Cow position: chrX:5320458-5319984 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 780-1180
Cow position: chrX:20974326-20974721 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 307, 43

Conread position: 781-1136
Cow position: chrX:1343000-1342647 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 54

Conread position: 782-1248
Cow position: chrX:36250590-36250135 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 50

Conread position: 783-1248
Cow position: chrX:34442170-34441720 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 46

Conread position: 784-1248
Cow position: chrX:5566564-5566091 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 23

Conread position: 784-1255
Cow position: chrX:32039565-32039109 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 12

Conread position: 785-1129
Cow position: chrX:20999003-20998660 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 785-1192
Cow position: chrX:39702128-39702514 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 785-1202
Cow position: chrX:37363996-37364404 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 44

Conread position: 785-1251
Cow position: chrX:31728734-31729188 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 785-1253
Cow position: chrX:44054079-44054537 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 106

Conread position: 786-993
Cow position: chrX:25848076-25848284 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 37

Conread position: 786-994
Cow position: chrX:3121623-3121416 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 50

Conread position: 786-1080
Cow position: chrX:1729583-1729297 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 67, 37

Conread position: 786-1080
Cow position: chrX:39556520-39556229 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 104

Conread position: 786-1150
Cow position: chrX:34034599-34034961 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 115

Conread position: 786-1248
Cow position: chrX:20742267-20742713 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 46

Conread position: 786-1248
Cow position: chrX:25282218-25281758 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 32

Conread position: 786-1251
Cow position: chrX:41847255-41846804 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 37

Conread position: 786-1255
Cow position: chrX:7695055-7695497 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 43

Conread position: 786-1255
Cow position: chrX:40788409-40788894 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 787-1178
Cow position: chrX:30430084-30429684 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 38

Conread position: 787-1208
Cow position: chrX:25198716-25199132 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 36

Conread position: 788-1109
Cow position: chrX:21582719-21583036 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 788-1239
Cow position: chrX:18193966-18194408 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1253
Cow position: chrX:27318507-27318947 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:16702947-16703404 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 788-1255
Cow position: chrX:18898373-18897917 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:18950460-18950011 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:24441963-24441513 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:29849353-29848897 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 788-1255
Cow position: chrX:30455346-30454888 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:35240142-35240598 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:36794285-36794728 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 788-1255
Cow position: chrX:38150964-38151422 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 789-930
Cow position: chrX:3596740-3596879 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 45

Conread position: 789-931
Cow position: chrX:15977676-15977536 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 41

Conread position: 789-932
Cow position: chrX:10059742-10059883 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 42

Conread position: 789-932
Cow position: chrX:31605071-31604930 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 45

Conread position: 789-938
Cow position: chrX:39292941-39292794 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 45

Conread position: 789-939
Cow position: chrX:7444184-7444332 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 42

Conread position: 789-956
Cow position: chrX:19608953-19609118 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 42

Conread position: 789-958
Cow position: chrX:13206229-13206396 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 42

Conread position: 789-976
Cow position: chrX:20580273-20580089 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 42

Conread position: 789-977
Cow position: chrX:14124969-14124783 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 45

Conread position: 789-977
Cow position: chrX:22077065-22076879 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 45

Conread position: 789-989
Cow position: chrX:41886105-41886304 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1025
Cow position: chrX:39548676-39548909 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1027
Cow position: chrX:2813205-2812970 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1027
Cow position: chrX:11409057-11408822 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1035
Cow position: chrX:32643763-32644006 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1042
Cow position: chrX:11976169-11975920 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 45

Conread position: 789-1042
Cow position: chrX:37403957-37403709 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 18

Conread position: 789-1070
Cow position: chrX:5248662-5248936 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1089
Cow position: chrX:22564410-22564113 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 789-1101
Cow position: chrX:28327191-28326880 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 42

Conread position: 789-1105
Cow position: chrX:27616085-27616394 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 789-1110
Cow position: chrX:30165394-30165082 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1111
Cow position: chrX:14049917-14049598 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1113
Cow position: chrX:5332156-5331839 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 789-1113
Cow position: chrX:20362870-20362536 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 184, 34

Conread position: 789-1114
Cow position: chrX:34719790-34720112 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1123
Cow position: chrX:40384322-40384655 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1123
Cow position: chrX:40601395-40601728 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1125
Cow position: chrX:23022590-23022924 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 48

Conread position: 789-1130
Cow position: chrX:34253506-34253844 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1136
Cow position: chrX:12178956-12179297 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1136
Cow position: chrX:37080242-37079897 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1142
Cow position: chrX:5392298-5391947 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1142
Cow position: chrX:13030934-13030583 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1142
Cow position: chrX:29083344-29083707 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 789-1155
Cow position: chrX:3081854-3081489 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 789-1155
Cow position: chrX:36479358-36478993 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1196
Cow position: chrX:30060166-30060563 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 789-1204
Cow position: chrX:24292402-24291975 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1206
Cow position: chrX:29907925-29907517 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1207
Cow position: chrX:2293323-2292914 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1207
Cow position: chrX:20020856-20021263 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 44

Conread position: 789-1207
Cow position: chrX:28706379-28706788 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1216
Cow position: chrX:865673-866091 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1233
Cow position: chrX:28503613-28504048 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1235
Cow position: chrX:23452168-23451743 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1236
Cow position: chrX:2579696-2580133 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1239
Cow position: chrX:3096476-3096037 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1240
Cow position: chrX:14462591-14463032 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 789-1241
Cow position: chrX:5866423-5866866 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1241
Cow position: chrX:28624484-28624039 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1241
Cow position: chrX:31978564-31978125 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1247
Cow position: chrX:3372576-3372131 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1247
Cow position: chrX:22601134-22600690 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 789-1247
Cow position: chrX:23341714-23341271 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 789-1247
Cow position: chrX:23986527-23986971 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 789-1247
Cow position: chrX:37852416-37852865 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 789-1248
Cow position: chrX:2486355-2485904 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 789-1248
Cow position: chrX:2932443-2931993 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:3417860-3417412 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:4343028-4343476 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:6870287-6869836 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 46

Conread position: 789-1248
Cow position: chrX:7551524-7551068 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 789-1248
Cow position: chrX:9642155-9641705 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:10528509-10528047 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 789-1248
Cow position: chrX:15091491-15091040 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 44

Conread position: 789-1248
Cow position: chrX:16040402-16039953 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 789-1248
Cow position: chrX:16465578-16466027 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 789-1248
Cow position: chrX:18656528-18656078 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:22521944-22521494 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:23572539-23572073 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1248
Cow position: chrX:24483090-24482644 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 789-1248
Cow position: chrX:26506664-26506212 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1248
Cow position: chrX:30139507-30139057 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1248
Cow position: chrX:37815868-37816315 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 789-1248
Cow position: chrX:40224965-40224516 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1251
Cow position: chrX:3464800-3464346 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 46

Conread position: 789-1251
Cow position: chrX:5124082-5123631 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1251
Cow position: chrX:5334538-5334089 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 789-1251
Cow position: chrX:10931950-10932402 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1251
Cow position: chrX:11146056-11145608 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1251
Cow position: chrX:14782068-14781615 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 789-1251
Cow position: chrX:22604161-22603709 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 789-1251
Cow position: chrX:24173884-24173438 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 789-1251
Cow position: chrX:26275415-26275869 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1251
Cow position: chrX:30688356-30688795 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 44

Conread position: 789-1251
Cow position: chrX:35533131-35533581 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 789-1251
Cow position: chrX:42733149-42733595 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1251
Cow position: chrX:45236743-45237196 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1252
Cow position: chrX:24467847-24467394 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 29

Conread position: 789-1252
Cow position: chrX:24769580-24769129 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1254
Cow position: chrX:23038716-23038264 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:2048389-2048837 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:2103682-2104139 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:2160042-2160499 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:2274197-2274651 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:2559683-2559226 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:3361098-3361553 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 789-1255
Cow position: chrX:4622676-4622220 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 789-1255
Cow position: chrX:4905713-4905255 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:5280576-5280119 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:5305878-5306333 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:5375641-5376103 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:5406337-5406792 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:5646827-5646370 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:5892505-5892962 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:6372457-6372915 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 789-1255
Cow position: chrX:6453974-6454429 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:7119367-7118910 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:7755182-7755635 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:8529817-8530274 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 789-1255
Cow position: chrX:9011604-9012061 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 789-1255
Cow position: chrX:9169337-9168880 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 789-1255
Cow position: chrX:10445138-10444681 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:10923294-10922837 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:11566191-11566648 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:11950209-11949759 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:12001870-12001413 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:12145379-12145829 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:12360165-12360623 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:12457975-12458432 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:13406013-13405562 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:14162469-14162925 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:14458890-14458433 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:14598123-14598579 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:15260342-15259885 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:15346692-15346235 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:15621255-15620798 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:16086846-16086390 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:16278929-16279383 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 789-1255
Cow position: chrX:16711233-16711688 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:16854109-16853655 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:17054846-17055303 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:17994736-17995193 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:18222690-18223147 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:18451802-18451345 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:18488437-18487980 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:19109764-19109307 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:19399055-19399512 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:19473882-19473427 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:20032554-20032097 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:20878490-20878029 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:20953810-20954260 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:21226754-21227206 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:21685896-21686354 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:21833148-21833619 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 18

Conread position: 789-1255
Cow position: chrX:22493284-22493741 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:22612662-22613120 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:22811167-22811620 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 789-1255
Cow position: chrX:23134856-23135309 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 789-1255
Cow position: chrX:23280286-23280740 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:24320995-24320538 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:24413307-24413764 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:24509144-24509601 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:24735221-24735672 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 44

Conread position: 789-1255
Cow position: chrX:25289402-25288945 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:25459361-25458903 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 789-1255
Cow position: chrX:26617644-26617187 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:26755348-26754895 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:26760291-26759835 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:26974187-26974644 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:27423006-27422547 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 789-1255
Cow position: chrX:27590753-27590299 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 789-1255
Cow position: chrX:27758984-27759441 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:27977557-27977095 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:28313702-28314159 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:28559556-28559101 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 44

Conread position: 789-1255
Cow position: chrX:28753063-28752606 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 789-1255
Cow position: chrX:29225755-29226210 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:29759965-29760433 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 44

Conread position: 789-1255
Cow position: chrX:29912616-29913073 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30053191-30052735 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30144007-30143550 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 789-1255
Cow position: chrX:30163961-30163504 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30172430-30171976 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30196574-30197031 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30199715-30199258 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30228837-30228377 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30752053-30752508 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 789-1255
Cow position: chrX:30816992-30816535 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30824925-30825382 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:30836664-30837107 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:32330908-32331365 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:33763621-33764078 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:34761343-34761800 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:36195369-36195826 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:36535458-36535001 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 789-1255
Cow position: chrX:36729661-36730118 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:38014371-38014828 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:38230990-38230533 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 789-1255
Cow position: chrX:38330659-38331116 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:39185450-39185907 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1255
Cow position: chrX:45658799-45658346 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 789-1255
Cow position: chrX:45903454-45903912 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 789-1255
Cow position: chrX:46296937-46297394 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1256
Cow position: chrX:16046424-16046883 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1262
Cow position: chrX:16285488-16285949 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 789-1302
Cow position: chrX:6581211-6581715 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 790-962
Cow position: chrX:12097573-12097743 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 44

Conread position: 790-971
Cow position: chrX:22140410-22140231 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 148, 14

Conread position: 790-977
Cow position: chrX:39698281-39698466 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 40

Conread position: 790-999
Cow position: chrX:20503924-20504130 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 34

Conread position: 790-1011
Cow position: chrX:40580885-40580667 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 44

Conread position: 790-1073
Cow position: chrX:32071402-32071122 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 39

Conread position: 790-1073
Cow position: chrX:38935700-38935984 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 107

Conread position: 790-1089
Cow position: chrX:16688546-16688842 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1124
Cow position: chrX:32057634-32057290 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 38

Conread position: 790-1133
Cow position: chrX:30159713-30159376 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 42

Conread position: 790-1137
Cow position: chrX:31496014-31496359 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1139
Cow position: chrX:24202309-24202651 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 790-1142
Cow position: chrX:39730861-39730512 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1149
Cow position: chrX:43566730-43567088 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 101

Conread position: 790-1150
Cow position: chrX:32194816-32194447 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 70

Conread position: 790-1155
Cow position: chrX:10412694-10412330 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 790-1155
Cow position: chrX:27983092-27982728 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1248
Cow position: chrX:23317134-23316693 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1248
Cow position: chrX:44018980-44019431 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 790-1251
Cow position: chrX:16359729-16359279 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 790-1251
Cow position: chrX:17782778-17783229 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1253
Cow position: chrX:7805657-7806110 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 790-1254
Cow position: chrX:37959887-37960343 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 287
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 230, 43

Conread position: 790-1255
Cow position: chrX:2382745-2383188 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 39

Conread position: 790-1255
Cow position: chrX:5289408-5288953 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:7096736-7097192 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:8641066-8641522 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:10866591-10866133 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 790-1255
Cow position: chrX:13928473-13928020 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1255
Cow position: chrX:17663640-17663178 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 790-1255
Cow position: chrX:20652693-20653127 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 790-1255
Cow position: chrX:27305207-27305660 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:27704877-27705327 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 790-1255
Cow position: chrX:28588249-28588704 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:29841891-29841435 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:30180649-30180192 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1255
Cow position: chrX:31202119-31202574 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 40

Conread position: 790-1255
Cow position: chrX:38852438-38852893 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 790-1255
Cow position: chrX:39560374-39559918 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 790-1255
Cow position: chrX:39713829-39714283 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 790-1255
Cow position: chrX:41156589-41157045 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 790-1255
Cow position: chrX:41527236-41526785 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 316
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 63, 39

Conread position: 790-1257
Cow position: chrX:25329301-25329748 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 791-1087
Cow position: chrX:24129586-24129887 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 27

Conread position: 791-1110
Cow position: chrX:11744549-11744861 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 791-1155
Cow position: chrX:10465064-10465427 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 791-1170
Cow position: chrX:42010329-42010689 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 38

Conread position: 791-1229
Cow position: chrX:24309829-24309412 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 791-1240
Cow position: chrX:14801541-14801099 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 791-1241
Cow position: chrX:23387259-23386819 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 791-1241
Cow position: chrX:23395886-23396326 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 791-1246
Cow position: chrX:38052153-38051707 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 43

Conread position: 791-1248
Cow position: chrX:1550244-1550677 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 39

Conread position: 791-1248
Cow position: chrX:5354024-5353576 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 791-1248
Cow position: chrX:27996930-27997377 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 791-1253
Cow position: chrX:2248072-2247600 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 317
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 134, 12

Conread position: 791-1254
Cow position: chrX:19622577-19623049 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 297
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 49

Conread position: 791-1255
Cow position: chrX:9128335-9128790 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 791-1255
Cow position: chrX:10915313-10915772 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 102

Conread position: 791-1255
Cow position: chrX:15173245-15172793 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 791-1255
Cow position: chrX:34519005-34519460 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 791-1255
Cow position: chrX:40545343-40544876 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 791-1255
Cow position: chrX:44901412-44901885 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 110

Conread position: 791-1258
Cow position: chrX:10409807-10409345 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 293
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 26

Conread position: 792-963
Cow position: chrX:24588455-24588290 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 37

Conread position: 792-970
Cow position: chrX:32144988-32144812 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 42

Conread position: 792-1113
Cow position: chrX:2500350-2500034 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 792-1198
Cow position: chrX:16782561-16782957 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 792-1207
Cow position: chrX:12996573-12996175 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 792-1252
Cow position: chrX:28820017-28820474 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 290
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 37

Conread position: 792-1255
Cow position: chrX:2479347-2478893 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 38

Conread position: 792-1255
Cow position: chrX:3649542-3649074 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 792-1255
Cow position: chrX:8434922-8434473 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 792-1255
Cow position: chrX:21768085-21768538 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 792-1255
Cow position: chrX:26531254-26531692 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 37

Conread position: 792-1255
Cow position: chrX:27498057-27498502 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 793-992
Cow position: chrX:40560259-40560068 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 25

Conread position: 793-1070
Cow position: chrX:28133397-28133665 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 36

Conread position: 793-1125
Cow position: chrX:40365462-40365133 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 793-1142
Cow position: chrX:13912378-13912721 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 5, 38

Conread position: 793-1161
Cow position: chrX:34990342-34990708 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 37

Conread position: 793-1196
Cow position: chrX:45421716-45421322 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 13

Conread position: 793-1236
Cow position: chrX:165159-165606 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 180, 30

Conread position: 793-1236
Cow position: chrX:15345153-15345568 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 298
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 31

Conread position: 793-1245
Cow position: chrX:3396492-3396045 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 90

Conread position: 793-1247
Cow position: chrX:24174670-24174225 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 31

Conread position: 793-1248
Cow position: chrX:18247630-18248068 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 31

Conread position: 793-1248
Cow position: chrX:26844787-26845239 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 793-1248
Cow position: chrX:39559086-39558640 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 38

Conread position: 793-1253
Cow position: chrX:22330288-22329839 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 59, 40

Conread position: 793-1255
Cow position: chrX:4633576-4633117 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 793-1255
Cow position: chrX:4751089-4750642 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 10

Conread position: 793-1255
Cow position: chrX:6835976-6835525 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 793-1255
Cow position: chrX:22887944-22888392 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 793-1255
Cow position: chrX:37781787-37781351 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 793-1255
Cow position: chrX:40268760-40269210 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 794-1113
Cow position: chrX:21667027-21666732 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 66, 35

Conread position: 794-1135
Cow position: chrX:25360848-25361182 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 29

Conread position: 794-1136
Cow position: chrX:16021098-16020763 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 794-1138
Cow position: chrX:44874243-44873910 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 24

Conread position: 794-1253
Cow position: chrX:18293228-18293668 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 10

Conread position: 794-1255
Cow position: chrX:6766457-6766004 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 794-1255
Cow position: chrX:7572664-7573113 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 794-1265
Cow position: chrX:37832189-37831724 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 35

Conread position: 795-956
Cow position: chrX:18987722-18987880 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 38

Conread position: 795-963
Cow position: chrX:26622356-26622192 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 34

Conread position: 795-976
Cow position: chrX:5841582-5841756 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 28

Conread position: 795-977
Cow position: chrX:27754713-27754892 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 34

Conread position: 795-977
Cow position: chrX:42466740-42466561 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 38

Conread position: 795-1015
Cow position: chrX:12102681-12102462 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 28

Conread position: 795-1024
Cow position: chrX:38839918-38840142 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 38, 0

Conread position: 795-1042
Cow position: chrX:23179520-23179287 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 795-1042
Cow position: chrX:37544263-37544512 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 28

Conread position: 795-1080
Cow position: chrX:10438651-10438374 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 269, 34

Conread position: 795-1080
Cow position: chrX:36839986-36840268 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 795-1081
Cow position: chrX:29954506-29954233 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 12

Conread position: 795-1090
Cow position: chrX:26441977-26441685 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 33

Conread position: 795-1098
Cow position: chrX:23193305-23193006 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 44

Conread position: 795-1105
Cow position: chrX:13800541-13800236 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 40, 107

Conread position: 795-1106
Cow position: chrX:31372746-31373053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1107
Cow position: chrX:30421862-30421555 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 34

Conread position: 795-1109
Cow position: chrX:2323991-2324298 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 795-1109
Cow position: chrX:2763849-2764161 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 795-1113
Cow position: chrX:4177103-4177419 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1138
Cow position: chrX:6279319-6278986 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1143
Cow position: chrX:10301406-10301748 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1145
Cow position: chrX:4482236-4482582 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 795-1155
Cow position: chrX:1018829-1018473 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 22

Conread position: 795-1163
Cow position: chrX:20869944-20869595 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 28

Conread position: 795-1181
Cow position: chrX:22125571-22125199 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 38

Conread position: 795-1186
Cow position: chrX:5639653-5639271 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1198
Cow position: chrX:26508507-26508922 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 795-1198
Cow position: chrX:45464732-45465121 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 795-1216
Cow position: chrX:10852326-10851919 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 22

Conread position: 795-1226
Cow position: chrX:2465990-2465576 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 22

Conread position: 795-1235
Cow position: chrX:4329787-4329365 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 28

Conread position: 795-1236
Cow position: chrX:9438785-9439240 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 28

Conread position: 795-1236
Cow position: chrX:34554028-34554450 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 38

Conread position: 795-1236
Cow position: chrX:38999187-38999618 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 38

Conread position: 795-1242
Cow position: chrX:1056103-1055672 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 23

Conread position: 795-1246
Cow position: chrX:13889110-13889561 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 302
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 21, 94

Conread position: 795-1247
Cow position: chrX:20131593-20131154 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 31

Conread position: 795-1248
Cow position: chrX:20653855-20654307 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 795-1248
Cow position: chrX:29049267-29049702 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1248
Cow position: chrX:44193156-44192715 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 795-1252
Cow position: chrX:21343679-21344125 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 795-1253
Cow position: chrX:9953401-9953852 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 34

Conread position: 795-1253
Cow position: chrX:19929718-19930162 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 795-1253
Cow position: chrX:28633191-28632746 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 795-1255
Cow position: chrX:6406634-6407080 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 795-1255
Cow position: chrX:6493017-6493466 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1255
Cow position: chrX:9854562-9855013 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 34

Conread position: 795-1255
Cow position: chrX:9899059-9898608 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 96

Conread position: 795-1255
Cow position: chrX:10440546-10440104 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 795-1255
Cow position: chrX:11083319-11082879 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 16

Conread position: 795-1255
Cow position: chrX:11358781-11358331 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1255
Cow position: chrX:11819648-11820092 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 795-1255
Cow position: chrX:17291218-17291664 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1255
Cow position: chrX:17891830-17892277 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 35

Conread position: 795-1255
Cow position: chrX:18462691-18462241 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1255
Cow position: chrX:20801065-20801512 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 795-1255
Cow position: chrX:23969637-23970092 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 795-1255
Cow position: chrX:29602749-29602313 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 40

Conread position: 795-1255
Cow position: chrX:37489010-37489452 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 795-1255
Cow position: chrX:41114485-41114938 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 297
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 57, 34

Conread position: 795-1255
Cow position: chrX:41733908-41733453 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 41

Conread position: 795-1255
Cow position: chrX:42539883-42540338 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 795-1255
Cow position: chrX:45042837-45043292 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 38

Conread position: 795-1255
Cow position: chrX:47380173-47379733 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 28

Conread position: 795-1259
Cow position: chrX:25405074-25404620 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 46

Conread position: 796-1080
Cow position: chrX:19211248-19210974 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 21

Conread position: 796-1105
Cow position: chrX:516797-517097 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 37

Conread position: 796-1113
Cow position: chrX:14263488-14263180 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 796-1113
Cow position: chrX:30089765-30089454 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 796-1117
Cow position: chrX:25451609-25451923 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 796-1163
Cow position: chrX:17902211-17901862 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 33

Conread position: 796-1208
Cow position: chrX:17158532-17158138 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 796-1248
Cow position: chrX:18769195-18769628 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 296
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 138, 27

Conread position: 796-1248
Cow position: chrX:28542598-28542155 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 303
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 33

Conread position: 796-1253
Cow position: chrX:2185527-2185959 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 796-1253
Cow position: chrX:13057839-13058296 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 796-1254
Cow position: chrX:508867-508423 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 300
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 56, 27

Conread position: 796-1254
Cow position: chrX:41106721-41106276 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 307
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 21

Conread position: 796-1255
Cow position: chrX:9391563-9391109 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 280
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 95

Conread position: 796-1255
Cow position: chrX:44052188-44052641 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 797-1123
Cow position: chrX:23237596-23237930 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 20

Conread position: 797-1255
Cow position: chrX:18244267-18244723 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 797-1255
Cow position: chrX:19228783-19228338 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 798-976
Cow position: chrX:17794116-17794292 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 31

Conread position: 798-977
Cow position: chrX:19878099-19878279 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 31

Conread position: 798-1065
Cow position: chrX:19657784-19658047 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 25

Conread position: 798-1074
Cow position: chrX:24109318-24109048 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1074
Cow position: chrX:37795188-37794922 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1095
Cow position: chrX:10146380-10146087 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1096
Cow position: chrX:32584644-32584351 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1102
Cow position: chrX:22102487-22102187 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 25

Conread position: 798-1130
Cow position: chrX:28156822-28157149 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 798-1149
Cow position: chrX:15151388-15151049 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1161
Cow position: chrX:13524313-13523960 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 58, 25

Conread position: 798-1215
Cow position: chrX:2701546-2701137 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 19

Conread position: 798-1233
Cow position: chrX:3211257-3210832 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 798-1247
Cow position: chrX:22409439-22408989 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 798-1248
Cow position: chrX:1331229-1331659 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1248
Cow position: chrX:40827457-40827020 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1251
Cow position: chrX:20976760-20976329 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 798-1251
Cow position: chrX:29170054-29169604 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 798-1252
Cow position: chrX:20970206-20970655 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 295
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 184, 25

Conread position: 798-1252
Cow position: chrX:21973231-21973674 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1253
Cow position: chrX:11855456-11855901 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1253
Cow position: chrX:21191152-21191610 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 798-1254
Cow position: chrX:2790522-2790973 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 13, 37

Conread position: 798-1255
Cow position: chrX:160718-161162 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 798-1255
Cow position: chrX:323202-323649 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1255
Cow position: chrX:6202794-6203243 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1255
Cow position: chrX:12290025-12290470 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 31

Conread position: 798-1255
Cow position: chrX:13786095-13785644 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1255
Cow position: chrX:22812349-22812796 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 798-1255
Cow position: chrX:24006542-24006088 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 798-1255
Cow position: chrX:27240024-27240470 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 182, 35

Conread position: 798-1255
Cow position: chrX:33822388-33822835 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 798-1255
Cow position: chrX:37955189-37955637 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 798-1255
Cow position: chrX:41879643-41879197 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 35

Conread position: 799-977
Cow position: chrX:22116118-22115942 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 34

Conread position: 799-1073
Cow position: chrX:20888317-20888051 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 24

Conread position: 799-1228
Cow position: chrX:16410126-16410554 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 24

Conread position: 799-1242
Cow position: chrX:25425414-25425860 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 309
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 35

Conread position: 800-1079
Cow position: chrX:26437028-26437296 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 800-1139
Cow position: chrX:21196312-21196646 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 17

Conread position: 800-1252
Cow position: chrX:15439345-15438918 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 801-1180
Cow position: chrX:22823002-22823368 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 186, 53

Conread position: 802-1162
Cow position: chrX:12095297-12094937 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 803-1011
Cow position: chrX:6654988-6654784 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 26

Conread position: 803-1153
Cow position: chrX:4768011-4768354 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 26

Conread position: 803-1241
Cow position: chrX:27450765-27450310 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 315
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 8

Conread position: 803-1248
Cow position: chrX:10256849-10256416 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 27

Conread position: 803-1248
Cow position: chrX:34078342-34078758 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 26

Conread position: 803-1254
Cow position: chrX:35847517-35847948 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 803-1255
Cow position: chrX:6543557-6543990 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 803-1255
Cow position: chrX:30821876-30822318 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 803-1255
Cow position: chrX:31488808-31489246 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 803-1255
Cow position: chrX:35609278-35609720 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 804-1118
Cow position: chrX:39387137-39386829 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 25

Conread position: 804-1248
Cow position: chrX:28518427-28517997 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 804-1253
Cow position: chrX:29876765-29876319 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 87

Conread position: 805-1017
Cow position: chrX:27629144-27629352 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 18

Conread position: 805-1241
Cow position: chrX:32182740-32182310 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 30

Conread position: 805-1248
Cow position: chrX:15113966-15114398 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 805-1248
Cow position: chrX:34866538-34866108 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 805-1251
Cow position: chrX:13971945-13971497 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 28

Conread position: 805-1255
Cow position: chrX:7486158-7486598 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 28

Conread position: 806-1087
Cow position: chrX:21658829-21659106 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 17

Conread position: 806-1105
Cow position: chrX:27646709-27646996 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 15

Conread position: 806-1248
Cow position: chrX:21592586-21593013 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 806-1253
Cow position: chrX:9837412-9837852 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 806-1255
Cow position: chrX:1576968-1576529 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 806-1255
Cow position: chrX:38961551-38961112 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 806-1255
Cow position: chrX:44961017-44961447 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 297
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 31

Conread position: 807-1065
Cow position: chrX:27001862-27002119 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 82

Conread position: 807-1101
Cow position: chrX:22579091-22578804 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 807-1130
Cow position: chrX:7177960-7178267 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 308, 26

Conread position: 807-1214
Cow position: chrX:18691854-18691447 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 262
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 83

Conread position: 807-1233
Cow position: chrX:37118194-37118617 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 807-1242
Cow position: chrX:1810861-1810440 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 22

Conread position: 807-1248
Cow position: chrX:40279105-40279533 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 807-1251
Cow position: chrX:40475530-40475111 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 26

Conread position: 807-1255
Cow position: chrX:10427832-10428274 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 807-1255
Cow position: chrX:42120599-42121037 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 808-980
Cow position: chrX:2146389-2146557 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 25

Conread position: 808-1013
Cow position: chrX:30727773-30727573 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 808-1038
Cow position: chrX:35028541-35028764 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 25

Conread position: 808-1110
Cow position: chrX:2300177-2300475 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 808-1153
Cow position: chrX:22871412-22871757 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 25

Conread position: 808-1161
Cow position: chrX:42380545-42380194 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 808-1216
Cow position: chrX:16478212-16478609 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 808-1244
Cow position: chrX:4408858-4409295 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 28

Conread position: 808-1246
Cow position: chrX:33803703-33803291 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 15

Conread position: 808-1247
Cow position: chrX:9299552-9299111 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 808-1252
Cow position: chrX:15574588-15574155 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 290
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 19

Conread position: 808-1255
Cow position: chrX:17631533-17631096 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 809-1042
Cow position: chrX:2365963-2366189 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 14

Conread position: 809-1108
Cow position: chrX:24923148-24923442 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 14

Conread position: 809-1113
Cow position: chrX:31570350-31570645 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 14

Conread position: 809-1216
Cow position: chrX:1960514-1960918 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 259
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 20

Conread position: 809-1222
Cow position: chrX:388805-389209 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 14

Conread position: 809-1222
Cow position: chrX:21625681-21625266 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 809-1236
Cow position: chrX:4995913-4996330 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 809-1248
Cow position: chrX:23987842-23988264 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 20

Conread position: 809-1255
Cow position: chrX:20733943-20734383 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 43, 24

Conread position: 809-1255
Cow position: chrX:26230215-26229774 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 24

Conread position: 809-1255
Cow position: chrX:34009050-34009484 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 14

Conread position: 810-1253
Cow position: chrX:11674356-11674790 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 13

Conread position: 810-1255
Cow position: chrX:31261335-31260897 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 810-1266
Cow position: chrX:3406054-3405612 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 811-979
Cow position: chrX:44929899-44930068 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 18

Conread position: 811-1063
Cow position: chrX:20789667-20789421 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 811-1113
Cow position: chrX:29064719-29065011 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 22

Conread position: 811-1191
Cow position: chrX:38007682-38007308 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 811-1241
Cow position: chrX:15140242-15139828 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 22

Conread position: 811-1246
Cow position: chrX:6012794-6012382 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 12

Conread position: 811-1247
Cow position: chrX:4630399-4629965 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 811-1250
Cow position: chrX:3145303-3145737 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 811-1250
Cow position: chrX:3582484-3582926 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 811-1253
Cow position: chrX:12310085-12309656 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 25

Conread position: 811-1253
Cow position: chrX:21500918-21501355 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 12

Conread position: 811-1253
Cow position: chrX:35680643-35681067 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 811-1255
Cow position: chrX:24447112-24447535 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 266
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 811-1255
Cow position: chrX:33538231-33538661 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 18

Conread position: 811-1255
Cow position: chrX:39352337-39351911 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 22

Conread position: 811-1266
Cow position: chrX:29780027-29780488 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 322
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 78

Conread position: 812-1248
Cow position: chrX:7277233-7277655 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 812-1248
Cow position: chrX:21318976-21319424 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 812-1253
Cow position: chrX:17265737-17265314 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 31

Conread position: 812-1253
Cow position: chrX:29942451-29942883 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 17

Conread position: 812-1254
Cow position: chrX:13138914-13138482 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 293
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 11

Conread position: 812-1255
Cow position: chrX:2524422-2523996 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 813-1140
Cow position: chrX:40541979-40542292 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 10

Conread position: 813-1253
Cow position: chrX:8516906-8517340 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 813-1255
Cow position: chrX:45413349-45412918 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 814-1001
Cow position: chrX:40707771-40707957 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 9

Conread position: 814-1117
Cow position: chrX:41082553-41082849 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 15

Conread position: 814-1212
Cow position: chrX:1048197-1048594 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 252
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 19

Conread position: 814-1254
Cow position: chrX:24888836-24888399 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 19

Conread position: 814-1255
Cow position: chrX:1976294-1975863 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 814-1255
Cow position: chrX:25436628-25436194 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 815-1255
Cow position: chrX:30965405-30965835 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 816-1255
Cow position: chrX:5408360-5408789 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 818-1113
Cow position: chrX:40693413-40693142 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 274, 11

Conread position: 819-1247
Cow position: chrX:41434097-41433694 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 51

Conread position: 822-1130
Cow position: chrX:12291669-12291975 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 35

Conread position: 822-1242
Cow position: chrX:30354702-30355116 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 822-1252
Cow position: chrX:1393919-1394348 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 266
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 68

Conread position: 823-1155
Cow position: chrX:26764780-26764450 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 6

Conread position: 823-1248
Cow position: chrX:671691-671282 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 823-1253
Cow position: chrX:7809696-7809271 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 6, 35

Conread position: 823-1255
Cow position: chrX:27594868-27594446 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 825-1248
Cow position: chrX:39939441-39939023 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 827-1037
Cow position: chrX:45884143-45884353 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 63

Conread position: 828-1110
Cow position: chrX:28608696-28608419 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 62

Conread position: 828-1170
Cow position: chrX:14924366-14924692 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 64

Conread position: 828-1204
Cow position: chrX:2649045-2648673 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 828-1248
Cow position: chrX:27117286-27117694 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 832-1044
Cow position: chrX:4299656-4299447 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 46

Conread position: 832-1254
Cow position: chrX:33614718-33615138 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 833-1048
Cow position: chrX:24289138-24288926 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 43

Conread position: 833-1109
Cow position: chrX:22869584-22869311 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 58

Conread position: 833-1113
Cow position: chrX:28879285-28879008 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 57

Conread position: 833-1142
Cow position: chrX:18455461-18455154 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 833-1207
Cow position: chrX:4326168-4325802 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 833-1248
Cow position: chrX:24317389-24317793 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 833-1248
Cow position: chrX:31778112-31777710 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 42

Conread position: 833-1250
Cow position: chrX:27095440-27095848 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 58

Conread position: 833-1253
Cow position: chrX:2463376-2462964 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 833-1253
Cow position: chrX:14908333-14908748 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 833-1253
Cow position: chrX:33815471-33815884 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 47

Conread position: 833-1255
Cow position: chrX:13405030-13404611 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 833-1255
Cow position: chrX:18024361-18024773 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 57

Conread position: 833-1255
Cow position: chrX:25816932-25816521 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 833-1255
Cow position: chrX:45430724-45430284 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 299
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 54

Conread position: 834-1070
Cow position: chrX:43450408-43450636 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 57

Conread position: 834-1255
Cow position: chrX:9018981-9018569 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 56

Conread position: 835-1139
Cow position: chrX:33884472-33884776 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 52

Conread position: 835-1248
Cow position: chrX:34222072-34222476 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 17, 41

Conread position: 835-1248
Cow position: chrX:41122396-41122799 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 54

Conread position: 835-1248
Cow position: chrX:42531158-42530757 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 835-1252
Cow position: chrX:38140718-38140302 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 836-1072
Cow position: chrX:1947635-1947402 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 54

Conread position: 836-1155
Cow position: chrX:40187300-40187620 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 836-1179
Cow position: chrX:8103971-8103643 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 51

Conread position: 836-1254
Cow position: chrX:11073884-11073472 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 836-1255
Cow position: chrX:18078587-18078176 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 54

Conread position: 836-1255
Cow position: chrX:28646658-28646251 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 54

Conread position: 837-1255
Cow position: chrX:38072442-38072033 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 838-1082
Cow position: chrX:5018279-5018037 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 14, 73

Conread position: 838-1246
Cow position: chrX:30920062-30919669 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 49

Conread position: 838-1255
Cow position: chrX:14030344-14030752 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 839-999
Cow position: chrX:20340785-20340628 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 52

Conread position: 839-1255
Cow position: chrX:41103119-41103522 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 840-1208
Cow position: chrX:12033595-12033240 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 840-1253
Cow position: chrX:12249124-12249533 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 840-1255
Cow position: chrX:9086005-9085599 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 841-974
Cow position: chrX:38793678-38793809 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 50

Conread position: 841-1108
Cow position: chrX:32010621-32010362 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 33

Conread position: 841-1255
Cow position: chrX:19775152-19774746 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 50

Conread position: 842-1206
Cow position: chrX:4868889-4869243 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 843-1155
Cow position: chrX:30980561-30980250 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 46

Conread position: 843-1255
Cow position: chrX:6044158-6043751 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 843-1255
Cow position: chrX:29875671-29875260 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 844-1253
Cow position: chrX:17610127-17609722 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 844-1255
Cow position: chrX:34564634-34565034 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 36

Conread position: 845-1089
Cow position: chrX:30544649-30544409 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 45

Conread position: 846-1247
Cow position: chrX:7288166-7288567 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 848-1074
Cow position: chrX:42222451-42222227 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 218, 41

Conread position: 848-1141
Cow position: chrX:40100338-40100046 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 261, 131

Conread position: 848-1246
Cow position: chrX:18152923-18152529 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 40

Conread position: 848-1248
Cow position: chrX:35287998-35288387 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 26

Conread position: 848-1255
Cow position: chrX:19127917-19127493 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 848-1255
Cow position: chrX:24975280-24975671 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 848-1255
Cow position: chrX:33172626-33172224 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 266
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 267, 28

Conread position: 848-1255
Cow position: chrX:44568326-44568728 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 38

Conread position: 848-1262
Cow position: chrX:30822854-30823256 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 41

Conread position: 852-1073
Cow position: chrX:41796880-41797097 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 852-1255
Cow position: chrX:41192030-41192424 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 37

Conread position: 854-1251
Cow position: chrX:47211498-47211120 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 855-1254
Cow position: chrX:39383737-39383346 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 30

Conread position: 857-1017
Cow position: chrX:22577497-22577341 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 857-1040
Cow position: chrX:39511678-39511857 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 857-1138
Cow position: chrX:45400695-45400416 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 32

Conread position: 857-1178
Cow position: chrX:29055265-29055577 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 33

Conread position: 857-1248
Cow position: chrX:33493076-33493459 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 35

Conread position: 857-1254
Cow position: chrX:7512838-7513224 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 32

Conread position: 857-1255
Cow position: chrX:9635907-9635518 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 32

Conread position: 857-1255
Cow position: chrX:29288923-29289310 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 32

Conread position: 857-1255
Cow position: chrX:35268242-35268624 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 32

Conread position: 857-1255
Cow position: chrX:40452874-40452479 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 32

Conread position: 857-1255
Cow position: chrX:40591032-40591420 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 32

Conread position: 858-1111
Cow position: chrX:8795826-8796069 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 31

Conread position: 858-1222
Cow position: chrX:20766465-20766821 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 236, 28

Conread position: 858-1253
Cow position: chrX:3807748-3808138 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 12

Conread position: 858-1253
Cow position: chrX:19437738-19437355 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 859-1248
Cow position: chrX:18711883-18712265 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 21

Conread position: 859-1255
Cow position: chrX:37760198-37760602 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 30

Conread position: 860-1105
Cow position: chrX:11546837-11547080 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 121

Conread position: 860-1248
Cow position: chrX:43217733-43218119 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 49

Conread position: 860-1255
Cow position: chrX:13359744-13360127 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 29

Conread position: 862-1138
Cow position: chrX:44396300-44396569 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 31

Conread position: 862-1255
Cow position: chrX:21662455-21662829 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 28

Conread position: 864-1104
Cow position: chrX:6658492-6658722 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 119

Conread position: 865-1198
Cow position: chrX:40450280-40449952 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 39, 23

Conread position: 865-1244
Cow position: chrX:17743424-17743793 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 24

Conread position: 866-1195
Cow position: chrX:9227735-9227407 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 23

Conread position: 868-1253
Cow position: chrX:34993528-34993908 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 21

Conread position: 869-1106
Cow position: chrX:40581148-40581391 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 122, 17

Conread position: 869-1255
Cow position: chrX:27323501-27323122 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 869-1255
Cow position: chrX:32430698-32431065 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 20

Conread position: 871-1074
Cow position: chrX:619459-619260 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 871-1200
Cow position: chrX:15993755-15994079 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 18

Conread position: 871-1247
Cow position: chrX:17122677-17122307 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 9

Conread position: 871-1248
Cow position: chrX:37071767-37072133 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 244, 18

Conread position: 871-1254
Cow position: chrX:4665259-4664884 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 871-1255
Cow position: chrX:45200521-45200153 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 14

Conread position: 872-1222
Cow position: chrX:13851849-13852193 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 874-1101
Cow position: chrX:25340397-25340614 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 874-1236
Cow position: chrX:15718328-15717962 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 99, 18

Conread position: 874-1248
Cow position: chrX:879001-878641 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 15

Conread position: 874-1248
Cow position: chrX:30531664-30531305 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 17

Conread position: 874-1255
Cow position: chrX:41488802-41488431 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 15

Conread position: 875-1108
Cow position: chrX:631253-631027 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 13

Conread position: 875-1123
Cow position: chrX:20445784-20445540 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 14

Conread position: 875-1155
Cow position: chrX:15038448-15038168 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 99, 13

Conread position: 875-1248
Cow position: chrX:16734889-16735251 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 14

Conread position: 875-1255
Cow position: chrX:21785133-21785501 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 14

Conread position: 875-1255
Cow position: chrX:22609231-22608858 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 108

Conread position: 875-1255
Cow position: chrX:24366588-24366216 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 14

Conread position: 875-1255
Cow position: chrX:28513437-28513806 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 13

Conread position: 876-1255
Cow position: chrX:1977861-1978230 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 12

Conread position: 876-1255
Cow position: chrX:25575324-25575696 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 239, 13

Conread position: 876-1255
Cow position: chrX:37061426-37061057 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 13

Conread position: 877-1255
Cow position: chrX:29010085-29010467 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 12

Conread position: 881-1255
Cow position: chrX:17497464-17497830 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 10

Conread position: 882-1212
Cow position: chrX:13821238-13821564 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 232, 69

Conread position: 882-1245
Cow position: chrX:43408368-43408725 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 26

Conread position: 882-1248
Cow position: chrX:41594914-41594546 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 99

Conread position: 882-1253
Cow position: chrX:36557157-36557522 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 184, 99

Conread position: 882-1255
Cow position: chrX:12724135-12724503 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 101

Conread position: 882-1255
Cow position: chrX:27485772-27486145 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 9

Conread position: 883-1248
Cow position: chrX:32871417-32871059 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 90

Conread position: 884-1255
Cow position: chrX:9153731-9154094 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 7

Conread position: 890-1113
Cow position: chrX:25946671-25946445 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 890-1252
Cow position: chrX:33003625-33003987 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 65

Conread position: 890-1255
Cow position: chrX:3569818-3570185 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 272

Conread position: 890-1255
Cow position: chrX:47144452-47144810 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 225, 93

Conread position: 891-1073
Cow position: chrX:21495019-21495200 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 891-1136
Cow position: chrX:5292552-5292306 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 82, 10

Conread position: 892-1154
Cow position: chrX:9161242-9160980 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 91

Conread position: 895-1125
Cow position: chrX:14990115-14989885 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 220, 88

Conread position: 895-1239
Cow position: chrX:36891202-36891551 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 208, 96

Conread position: 895-1248
Cow position: chrX:1498972-1499321 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 88

Conread position: 895-1253
Cow position: chrX:33631535-33631892 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 93

Conread position: 895-1253
Cow position: chrX:34840390-34840036 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 95

Conread position: 895-1255
Cow position: chrX:12853116-12852775 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 286, 85

Conread position: 895-1255
Cow position: chrX:18684158-18684516 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 93, 74

Conread position: 895-1255
Cow position: chrX:23666564-23666917 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 88

Conread position: 895-1255
Cow position: chrX:26749498-26749139 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 191

Conread position: 896-1246
Cow position: chrX:151287-151626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 218, 83

Conread position: 896-1255
Cow position: chrX:13071222-13070868 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 87

Conread position: 896-1255
Cow position: chrX:13091782-13091428 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 87

Conread position: 897-1251
Cow position: chrX:8782127-8782474 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 86

Conread position: 897-1255
Cow position: chrX:37134150-37133800 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 94

Conread position: 898-1129
Cow position: chrX:15306348-15306117 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 193

Conread position: 900-1221
Cow position: chrX:36513847-36514163 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 100, 74

Conread position: 900-1247
Cow position: chrX:29915838-29915499 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 89

Conread position: 900-1253
Cow position: chrX:41304352-41304007 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 900-1255
Cow position: chrX:21415467-21415822 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 205, 74

Conread position: 900-1255
Cow position: chrX:33589526-33589873 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 42

Conread position: 901-1118
Cow position: chrX:16744573-16744790 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 214, 82

Conread position: 901-1128
Cow position: chrX:10905583-10905356 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 214, 13

Conread position: 901-1252
Cow position: chrX:729477-729133 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 81

Conread position: 902-1255
Cow position: chrX:28866593-28866255 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 32

Conread position: 904-1254
Cow position: chrX:39546590-39546240 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 79

Conread position: 905-1095
Cow position: chrX:8108725-8108919 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 905-1110
Cow position: chrX:23033508-23033709 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 167, 78

Conread position: 905-1221
Cow position: chrX:11448710-11448398 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 77

Conread position: 905-1233
Cow position: chrX:23819834-23819513 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 97

Conread position: 905-1242
Cow position: chrX:39294544-39294878 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 47

Conread position: 905-1254
Cow position: chrX:24031419-24031073 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 222
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 204, 76

Conread position: 906-1185
Cow position: chrX:25144472-25144743 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 177, 75

Conread position: 906-1236
Cow position: chrX:7394275-7393954 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 209, 75

Conread position: 906-1253
Cow position: chrX:9537934-9538275 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 74

Conread position: 906-1254
Cow position: chrX:19464969-19464626 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 206, 67

Conread position: 906-1255
Cow position: chrX:14408058-14407716 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 77

Conread position: 907-1255
Cow position: chrX:29903135-29903476 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 76

Conread position: 907-1255
Cow position: chrX:33827656-33827298 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 76

Conread position: 908-1248
Cow position: chrX:29777436-29777769 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 207, 66

Conread position: 910-1212
Cow position: chrX:12823396-12823697 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 910-1255
Cow position: chrX:11461475-11461138 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 911-1241
Cow position: chrX:42954811-42955151 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 201

Conread position: 911-1247
Cow position: chrX:5676288-5675972 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 911-1248
Cow position: chrX:18460073-18459730 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 286

Conread position: 911-1252
Cow position: chrX:27949768-27950112 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 168

Conread position: 913-1074
Cow position: chrX:20707893-20708052 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 913-1093
Cow position: chrX:4943811-4943631 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 128, 70

Conread position: 913-1098
Cow position: chrX:17490738-17490928 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 10

Conread position: 913-1105
Cow position: chrX:37036930-37037116 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 177, 68

Conread position: 913-1149
Cow position: chrX:28558287-28558520 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 199, 12

Conread position: 913-1154
Cow position: chrX:36202791-36203032 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 199, 60

Conread position: 913-1155
Cow position: chrX:1958590-1958346 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 79

Conread position: 913-1180
Cow position: chrX:20544721-20544439 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 913-1245
Cow position: chrX:10960058-10960389 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 112

Conread position: 913-1247
Cow position: chrX:23121796-23122111 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 177, 70

Conread position: 913-1248
Cow position: chrX:16229574-16229249 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 68

Conread position: 913-1248
Cow position: chrX:26752524-26752190 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 61

Conread position: 913-1253
Cow position: chrX:19400228-19400562 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 21

Conread position: 913-1253
Cow position: chrX:46985194-46984845 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 155, 70

Conread position: 913-1254
Cow position: chrX:10583517-10583176 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 12

Conread position: 913-1255
Cow position: chrX:525079-525410 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 7

Conread position: 913-1255
Cow position: chrX:11716063-11715728 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 913-1255
Cow position: chrX:15120486-15120155 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 202, 76

Conread position: 913-1255
Cow position: chrX:15329052-15329387 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 18

Conread position: 913-1255
Cow position: chrX:16324845-16324513 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 60

Conread position: 913-1255
Cow position: chrX:20726159-20726494 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 913-1255
Cow position: chrX:35409072-35409402 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 913-1255
Cow position: chrX:37764798-37764463 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 913-1255
Cow position: chrX:37773035-37772700 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 913-1255
Cow position: chrX:42499675-42499331 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 913-1266
Cow position: chrX:19163232-19162889 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 202, 47

Conread position: 914-1110
Cow position: chrX:21390192-21390382 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 76

Conread position: 914-1198
Cow position: chrX:6642092-6642382 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 914-1229
Cow position: chrX:17230906-17231208 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 201, 99

Conread position: 914-1248
Cow position: chrX:7571303-7571633 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 69

Conread position: 914-1248
Cow position: chrX:36975240-36975571 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 60

Conread position: 914-1255
Cow position: chrX:2664410-2664743 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 201, 6

Conread position: 914-1255
Cow position: chrX:6558250-6558584 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 69

Conread position: 914-1255
Cow position: chrX:16078067-16078403 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 22

Conread position: 914-1255
Cow position: chrX:22538554-22538220 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 69

Conread position: 914-1255
Cow position: chrX:35025211-35025538 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 295, 60

Conread position: 915-1155
Cow position: chrX:27772682-27772453 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 197, 150

Conread position: 915-1247
Cow position: chrX:12347278-12347604 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 198, 68

Conread position: 915-1255
Cow position: chrX:34543170-34543497 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 19

Conread position: 916-1108
Cow position: chrX:833434-833240 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 75

Conread position: 916-1113
Cow position: chrX:37069124-37069325 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 67

Conread position: 916-1242
Cow position: chrX:47376891-47376567 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 212
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 196, 28

Conread position: 916-1255
Cow position: chrX:42086265-42086596 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 917-1065
Cow position: chrX:13922630-13922779 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 917-1246
Cow position: chrX:20582435-20582755 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 63

Conread position: 918-1230
Cow position: chrX:47747725-47748033 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 63

Conread position: 918-1248
Cow position: chrX:17200191-17200530 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 65

Conread position: 919-1149
Cow position: chrX:11632053-11632282 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 196, 64

Conread position: 919-1248
Cow position: chrX:5246652-5246981 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 102, 62

Conread position: 919-1252
Cow position: chrX:38438893-38439204 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 64

Conread position: 919-1255
Cow position: chrX:20098727-20099056 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 64

Conread position: 920-1063
Cow position: chrX:7444341-7444483 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 920-1074
Cow position: chrX:15008912-15008760 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 920-1080
Cow position: chrX:48370265-48370430 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 920-1113
Cow position: chrX:22819671-22819863 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 920-1118
Cow position: chrX:21565546-21565743 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 195, 63

Conread position: 920-1154
Cow position: chrX:4632614-4632386 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 53

Conread position: 920-1177
Cow position: chrX:11614100-11614358 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 94, 54

Conread position: 920-1206
Cow position: chrX:30133901-30133624 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 202, 53

Conread position: 920-1236
Cow position: chrX:37906365-37906667 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 192, 47

Conread position: 920-1248
Cow position: chrX:9403503-9403838 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 97, 70

Conread position: 920-1248
Cow position: chrX:37066678-37067001 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 195, 120

Conread position: 920-1255
Cow position: chrX:10416128-10415792 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 233

Conread position: 920-1255
Cow position: chrX:39292337-39292009 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 63

Conread position: 921-1255
Cow position: chrX:3654015-3654342 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 146, 129

Conread position: 921-1255
Cow position: chrX:22556908-22557235 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 62

Conread position: 923-1240
Cow position: chrX:16808426-16808117 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 192, 60

Conread position: 923-1255
Cow position: chrX:5423657-5423332 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 60

Conread position: 924-1255
Cow position: chrX:14884552-14884230 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 59

Conread position: 925-1255
Cow position: chrX:44168899-44168575 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 58

Conread position: 926-1233
Cow position: chrX:24424986-24424680 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 87, 47

Conread position: 926-1246
Cow position: chrX:41049527-41049838 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 188, 47

Conread position: 926-1255
Cow position: chrX:27443146-27442818 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 168, 57

Conread position: 927-1162
Cow position: chrX:34663560-34663323 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 47

Conread position: 927-1253
Cow position: chrX:24826747-24827071 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 64

Conread position: 928-1181
Cow position: chrX:33685029-33684776 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 246, 55

Conread position: 928-1255
Cow position: chrX:19022895-19022575 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 187, 55

Conread position: 930-1108
Cow position: chrX:18288044-18287872 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 931-1255
Cow position: chrX:42462333-42462014 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 229

Conread position: 936-1126
Cow position: chrX:15486238-15486048 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 179, 47

Conread position: 936-1253
Cow position: chrX:35440972-35441283 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 183, 47

Conread position: 936-1255
Cow position: chrX:2151509-2151198 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 12

Conread position: 936-1255
Cow position: chrX:27446117-27446425 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 937-1248
Cow position: chrX:8590954-8591267 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 48

Conread position: 937-1255
Cow position: chrX:31814466-31814155 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 938-1252
Cow position: chrX:27342894-27343206 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 45

Conread position: 939-1255
Cow position: chrX:2715047-2715356 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 44

Conread position: 940-1255
Cow position: chrX:24588028-24587720 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 175, 43

Conread position: 942-1142
Cow position: chrX:16290593-16290385 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 942-1255
Cow position: chrX:11655511-11655813 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 173, 46

Conread position: 942-1255
Cow position: chrX:39757461-39757767 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 41

Conread position: 943-1244
Cow position: chrX:21815592-21815892 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 943-1253
Cow position: chrX:23414959-23414650 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 40

Conread position: 943-1253
Cow position: chrX:25205122-25205442 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 130

Conread position: 943-1255
Cow position: chrX:44367205-44367511 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 29

Conread position: 944-1119
Cow position: chrX:44802877-44803054 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 944-1236
Cow position: chrX:10077970-10078260 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 84

Conread position: 944-1255
Cow position: chrX:7424856-7425164 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 946-1229
Cow position: chrX:9911342-9911063 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 166, 37

Conread position: 946-1255
Cow position: chrX:37957929-37958231 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 37

Conread position: 947-1103
Cow position: chrX:617015-616860 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 947-1190
Cow position: chrX:16514814-16514572 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 36

Conread position: 947-1254
Cow position: chrX:48771253-48771561 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 41

Conread position: 948-1252
Cow position: chrX:23109198-23109493 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 167, 35

Conread position: 949-1255
Cow position: chrX:10351296-10351595 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 31

Conread position: 949-1255
Cow position: chrX:26626262-26625951 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 34

Conread position: 949-1255
Cow position: chrX:26878091-26878401 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 148

Conread position: 950-1110
Cow position: chrX:44737695-44737535 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 950-1221
Cow position: chrX:35260412-35260677 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 165, 33

Conread position: 950-1255
Cow position: chrX:40496162-40495864 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 64, 22

Conread position: 951-1123
Cow position: chrX:31472816-31472989 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 164, 32

Conread position: 951-1253
Cow position: chrX:13430025-13429738 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 951-1255
Cow position: chrX:8541903-8542205 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 32

Conread position: 952-1248
Cow position: chrX:22568579-22568292 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 163, 31

Conread position: 952-1252
Cow position: chrX:8483529-8483819 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 163, 28

Conread position: 955-1235
Cow position: chrX:21595978-21596251 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 135, 37

Conread position: 955-1248
Cow position: chrX:28024704-28024990 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 28

Conread position: 955-1248
Cow position: chrX:38227652-38227363 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 28

Conread position: 955-1255
Cow position: chrX:38963554-38963846 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 25

Conread position: 956-1255
Cow position: chrX:14819156-14819446 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 27

Conread position: 957-1255
Cow position: chrX:35937623-35937335 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 31

Conread position: 958-1248
Cow position: chrX:5070042-5069762 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 958-1248
Cow position: chrX:12465939-12466222 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 157, 25

Conread position: 958-1248
Cow position: chrX:18988905-18989193 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 157, 25

Conread position: 958-1255
Cow position: chrX:6695904-6695611 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 157, 33

Conread position: 958-1255
Cow position: chrX:30940625-30940915 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 157, 25

Conread position: 959-1251
Cow position: chrX:24280382-24280665 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 137, 24

Conread position: 959-1255
Cow position: chrX:27404500-27404212 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 156, 24

Conread position: 960-1155
Cow position: chrX:40121557-40121364 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 23

Conread position: 960-1255
Cow position: chrX:28110941-28111229 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 150, 23

Conread position: 960-1255
Cow position: chrX:31605130-31605418 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 155, 23

Conread position: 962-1255
Cow position: chrX:32329472-32329755 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 153, 21

Conread position: 963-1200
Cow position: chrX:27395550-27395314 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 150, 20

Conread position: 963-1252
Cow position: chrX:8518521-8518806 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 152, 20

Conread position: 964-1245
Cow position: chrX:43648306-43648020 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 148, 59

Conread position: 966-1252
Cow position: chrX:14122299-14122021 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 149, 17

Conread position: 966-1255
Cow position: chrX:4123287-4123569 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 62

Conread position: 967-1248
Cow position: chrX:4415302-4415582 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 94

Conread position: 967-1253
Cow position: chrX:19878488-19878769 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 14

Conread position: 970-1108
Cow position: chrX:27022274-27022412 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 27

Conread position: 970-1254
Cow position: chrX:8806885-8806611 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 85

Conread position: 972-1239
Cow position: chrX:39125770-39126038 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 19

Conread position: 972-1255
Cow position: chrX:39698784-39699060 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 188

Conread position: 973-1180
Cow position: chrX:40559807-40559603 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 174

Conread position: 973-1189
Cow position: chrX:45373825-45373615 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 137, 172

Conread position: 973-1242
Cow position: chrX:13178007-13177736 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 973-1246
Cow position: chrX:24105086-24105351 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 142, 98

Conread position: 973-1247
Cow position: chrX:20504220-20504490 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 142, 111

Conread position: 973-1248
Cow position: chrX:19447895-19447618 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 141, 209

Conread position: 973-1248
Cow position: chrX:41067294-41067566 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 139, 19

Conread position: 973-1253
Cow position: chrX:158378-158099 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 10, 78

Conread position: 973-1254
Cow position: chrX:19919133-19918862 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 103

Conread position: 973-1255
Cow position: chrX:20383083-20382797 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 168

Conread position: 973-1255
Cow position: chrX:32144704-32144429 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 102

Conread position: 973-1266
Cow position: chrX:2146771-2147061 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 113

Conread position: 974-1106
Cow position: chrX:31373058-31373190 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 974-1241
Cow position: chrX:47368790-47368526 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 185

Conread position: 974-1248
Cow position: chrX:22772114-22772382 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 141, 171

Conread position: 974-1253
Cow position: chrX:5277459-5277183 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 124

Conread position: 974-1255
Cow position: chrX:32623020-32623299 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 114, 81

Conread position: 974-1255
Cow position: chrX:46533061-46532786 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 171

Conread position: 974-1266
Cow position: chrX:45992706-45992994 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 116, 45

Conread position: 975-1222
Cow position: chrX:34797494-34797735 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 140, 170

Conread position: 975-1248
Cow position: chrX:20340430-20340164 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 184

Conread position: 975-1255
Cow position: chrX:529257-529538 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 52

Conread position: 975-1255
Cow position: chrX:15781041-15781315 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 140, 170

Conread position: 975-1255
Cow position: chrX:18799825-18799547 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 18

Conread position: 975-1255
Cow position: chrX:20675567-20675834 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 75

Conread position: 975-1255
Cow position: chrX:22449374-22449648 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 28

Conread position: 976-1242
Cow position: chrX:20957476-20957741 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 209

Conread position: 976-1248
Cow position: chrX:16733289-16733019 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 138, 116

Conread position: 977-1115
Cow position: chrX:25848411-25848549 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 12

Conread position: 977-1252
Cow position: chrX:3223587-3223311 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 209

Conread position: 978-1255
Cow position: chrX:48310922-48310646 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 134, 204

Conread position: 980-1255
Cow position: chrX:41754181-41754454 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 49

Conread position: 982-1248
Cow position: chrX:12008213-12007955 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 133, 37

Conread position: 983-1196
Cow position: chrX:23908706-23908496 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 8

Conread position: 984-1255
Cow position: chrX:3471191-3471461 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 120, 187

Conread position: 985-1148
Cow position: chrX:46824273-46824106 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 985-1207
Cow position: chrX:21459135-21458919 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 130, 160

Conread position: 985-1246
Cow position: chrX:38642490-38642750 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 194

Conread position: 985-1248
Cow position: chrX:28993677-28993418 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 129, 59

Conread position: 985-1255
Cow position: chrX:3596597-3596333 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 130, 160

Conread position: 985-1255
Cow position: chrX:22522361-22522097 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 130, 160

Conread position: 987-1255
Cow position: chrX:45113106-45113370 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 103, 166

Conread position: 989-1251
Cow position: chrX:29031853-29032116 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 31, 40

Conread position: 989-1255
Cow position: chrX:32094975-32094716 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 13

Conread position: 989-1255
Cow position: chrX:48423409-48423669 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 126, 156

Conread position: 991-1174
Cow position: chrX:24174212-24174029 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 96

Conread position: 991-1245
Cow position: chrX:17965040-17964791 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 138

Conread position: 991-1247
Cow position: chrX:33707874-33708121 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 101

Conread position: 991-1255
Cow position: chrX:40481394-40481139 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 109

Conread position: 992-1222
Cow position: chrX:19333668-19333444 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 153

Conread position: 992-1246
Cow position: chrX:15007674-15007426 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 124, 165

Conread position: 992-1255
Cow position: chrX:2418006-2417750 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 123, 99

Conread position: 992-1255
Cow position: chrX:3154773-3154515 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 123, 28

Conread position: 992-1255
Cow position: chrX:6196275-6196020 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 20

Conread position: 992-1255
Cow position: chrX:6566551-6566808 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 153

Conread position: 992-1255
Cow position: chrX:9651569-9651311 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 153

Conread position: 992-1255
Cow position: chrX:15531675-15531421 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 153

Conread position: 992-1255
Cow position: chrX:22115807-22115548 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 992-1255
Cow position: chrX:22901188-22900925 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 159

Conread position: 992-1255
Cow position: chrX:24788234-24787982 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 109

Conread position: 992-1255
Cow position: chrX:42591202-42591459 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 153

Conread position: 993-1142
Cow position: chrX:31435805-31435955 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 995-1163
Cow position: chrX:25045647-25045814 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 84

Conread position: 995-1208
Cow position: chrX:38584207-38584414 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 150

Conread position: 995-1253
Cow position: chrX:31949449-31949199 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 80

Conread position: 995-1255
Cow position: chrX:42470456-42470203 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 120, 53

Conread position: 997-1255
Cow position: chrX:27749527-27749275 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 148

Conread position: 998-1154
Cow position: chrX:24293215-24293063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 117, 29

Conread position: 1000-1252
Cow position: chrX:21025555-21025311 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 178

Conread position: 1002-1233
Cow position: chrX:36294621-36294853 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 181

Conread position: 1002-1254
Cow position: chrX:25150675-25150928 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 113, 38

Conread position: 1002-1255
Cow position: chrX:3157105-3157352 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 113, 143

Conread position: 1002-1255
Cow position: chrX:25277012-25276765 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 143

Conread position: 1002-1255
Cow position: chrX:38548894-38549147 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 101

Conread position: 1002-1255
Cow position: chrX:42459659-42459906 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 113, 143

Conread position: 1003-1162
Cow position: chrX:38793984-38794143 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 109, 89

Conread position: 1003-1170
Cow position: chrX:25337690-25337849 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 26

Conread position: 1003-1248
Cow position: chrX:32743033-32743265 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 1003-1255
Cow position: chrX:30093876-30093630 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 109, 118

Conread position: 1004-1255
Cow position: chrX:42994112-42994348 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1007-1142
Cow position: chrX:36900998-36900865 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 27

Conread position: 1010-1255
Cow position: chrX:14133972-14134209 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 18

Conread position: 1011-1255
Cow position: chrX:3161517-3161282 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 150, 89

Conread position: 1012-1248
Cow position: chrX:31746000-31745770 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 144

Conread position: 1013-1248
Cow position: chrX:22077825-22078054 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 102, 132

Conread position: 1013-1255
Cow position: chrX:626543-626310 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 45

Conread position: 1013-1262
Cow position: chrX:5871816-5872056 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 218, 16

Conread position: 1014-1255
Cow position: chrX:2351561-2351796 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 131

Conread position: 1014-1255
Cow position: chrX:3387605-3387840 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 101, 131

Conread position: 1014-1255
Cow position: chrX:8869886-8869650 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 144

Conread position: 1014-1255
Cow position: chrX:27105757-27105992 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 101, 146

Conread position: 1015-1142
Cow position: chrX:4795008-4794880 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1015-1251
Cow position: chrX:35223802-35224032 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 100, 130

Conread position: 1015-1255
Cow position: chrX:12691159-12690925 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 100, 130

Conread position: 1015-1255
Cow position: chrX:13266330-13266090 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 75, 86

Conread position: 1021-1205
Cow position: chrX:18215438-18215616 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 7

Conread position: 1021-1253
Cow position: chrX:36133704-36133479 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 7

Conread position: 1023-1236
Cow position: chrX:34532039-34532246 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 92, 122

Conread position: 1023-1255
Cow position: chrX:12115549-12115775 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 92, 135

Conread position: 1023-1255
Cow position: chrX:12437724-12437502 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 89, 18

Conread position: 1023-1255
Cow position: chrX:24969308-24969082 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 92, 121

Conread position: 1023-1255
Cow position: chrX:37572672-37572898 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 122

Conread position: 1023-1255
Cow position: chrX:47317914-47318140 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 122

Conread position: 1025-1255
Cow position: chrX:47243795-47243569 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 122

Conread position: 1026-1247
Cow position: chrX:29864920-29864705 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 134

Conread position: 1026-1255
Cow position: chrX:5599467-5599244 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 119

Conread position: 1026-1255
Cow position: chrX:21862159-21861941 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 131

Conread position: 1026-1255
Cow position: chrX:38934765-38934989 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 133

Conread position: 1026-1255
Cow position: chrX:38940887-38941111 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 133

Conread position: 1026-1255
Cow position: chrX:45786641-45786864 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 89, 133

Conread position: 1028-1241
Cow position: chrX:26728368-26728575 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 117

Conread position: 1028-1253
Cow position: chrX:28214847-28215071 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 145, 116

Conread position: 1028-1255
Cow position: chrX:14974225-14973994 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 158

Conread position: 1028-1255
Cow position: chrX:34238233-34238455 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 129

Conread position: 1029-1191
Cow position: chrX:26492680-26492513 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 1029-1247
Cow position: chrX:43980259-43980478 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 154

Conread position: 1031-1205
Cow position: chrX:29859431-29859263 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 114

Conread position: 1031-1219
Cow position: chrX:31251781-31251963 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 130

Conread position: 1031-1234
Cow position: chrX:30833915-30833709 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 60

Conread position: 1031-1248
Cow position: chrX:37403507-37403296 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 114

Conread position: 1031-1255
Cow position: chrX:9252655-9252440 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 99

Conread position: 1031-1255
Cow position: chrX:11455551-11455335 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 114

Conread position: 1032-1255
Cow position: chrX:43510933-43511154 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 113

Conread position: 1034-1208
Cow position: chrX:18551425-18551593 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 111

Conread position: 1034-1248
Cow position: chrX:31385236-31385446 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 117

Conread position: 1035-1255
Cow position: chrX:38840369-38840590 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 79

Conread position: 1036-1255
Cow position: chrX:42381908-42381694 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 100

Conread position: 1037-1255
Cow position: chrX:18695403-18695187 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 60

Conread position: 1037-1255
Cow position: chrX:22590762-22590974 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 55

Conread position: 1039-1247
Cow position: chrX:17794517-17794721 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 124

Conread position: 1039-1253
Cow position: chrX:28855020-28855234 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 128

Conread position: 1042-1255
Cow position: chrX:22623979-22624190 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 73, 118

Conread position: 1043-1255
Cow position: chrX:47965471-47965251 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 148

Conread position: 1046-1255
Cow position: chrX:41306103-41305895 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 115

Conread position: 1047-1248
Cow position: chrX:38067181-38066986 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 114

Conread position: 1047-1255
Cow position: chrX:24260081-24259873 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 131

Conread position: 1050-1253
Cow position: chrX:32128459-32128262 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 101

Conread position: 1050-1255
Cow position: chrX:27516071-27516267 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 1050-1255
Cow position: chrX:27679886-27680096 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 137

Conread position: 1050-1255
Cow position: chrX:28058259-28058061 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 47

Conread position: 1052-1226
Cow position: chrX:42281934-42282109 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 131

Conread position: 1052-1233
Cow position: chrX:23696886-23696701 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 6, 133

Conread position: 1052-1251
Cow position: chrX:40180334-40180140 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 93

Conread position: 1053-1253
Cow position: chrX:917839-917638 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 108

Conread position: 1053-1255
Cow position: chrX:16222164-16222359 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 92

Conread position: 1055-1248
Cow position: chrX:27019745-27019930 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 96

Conread position: 1055-1252
Cow position: chrX:7311533-7311724 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 90

Conread position: 1055-1255
Cow position: chrX:1781445-1781639 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 90

Conread position: 1055-1255
Cow position: chrX:11663718-11663912 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 1055-1255
Cow position: chrX:34285524-34285330 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 90

Conread position: 1055-1255
Cow position: chrX:34413316-34413510 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 1058-1246
Cow position: chrX:4553899-4554094 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1058-1248
Cow position: chrX:27626898-27627082 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 87

Conread position: 1058-1255
Cow position: chrX:8899568-8899758 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 93

Conread position: 1058-1255
Cow position: chrX:24288370-24288179 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 97

Conread position: 1058-1255
Cow position: chrX:42530363-42530173 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 30

Conread position: 1061-1255
Cow position: chrX:35633208-35633019 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 1062-1255
Cow position: chrX:7444631-7444818 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 83

Conread position: 1064-1255
Cow position: chrX:42222017-42221834 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 12

Conread position: 1067-1255
Cow position: chrX:160487-160298 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 48, 31

Conread position: 1068-1230
Cow position: chrX:20709586-20709747 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 29

Conread position: 1068-1233
Cow position: chrX:19210842-19210678 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 23

Conread position: 1068-1248
Cow position: chrX:19022980-19023153 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 92

Conread position: 1068-1251
Cow position: chrX:13686271-13686447 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 14

Conread position: 1068-1255
Cow position: chrX:11672334-11672515 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 77

Conread position: 1068-1255
Cow position: chrX:38094972-38094791 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 77

Conread position: 1068-1255
Cow position: chrX:41884883-41884703 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 39

Conread position: 1068-1255
Cow position: chrX:43075522-43075716 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 23

Conread position: 1070-1255
Cow position: chrX:1729020-1728834 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 29

Conread position: 1070-1255
Cow position: chrX:38936247-38936433 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 27

Conread position: 1072-1255
Cow position: chrX:13396694-13396518 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 1077-1247
Cow position: chrX:4044296-4044132 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 81

Conread position: 1077-1255
Cow position: chrX:10438089-10437916 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 83

Conread position: 1077-1255
Cow position: chrX:28847320-28847142 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 106

Conread position: 1077-1255
Cow position: chrX:37231973-37232146 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 79

Conread position: 1077-1255
Cow position: chrX:40035907-40035737 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 52

Conread position: 1079-1252
Cow position: chrX:13384971-13385138 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 66

Conread position: 1079-1253
Cow position: chrX:30729938-30729764 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 102

Conread position: 1079-1255
Cow position: chrX:24809406-24809236 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 66

Conread position: 1085-1255
Cow position: chrX:36840431-36840601 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 99

Conread position: 1086-1253
Cow position: chrX:16284409-16284242 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 97

Conread position: 1091-1247
Cow position: chrX:6654741-6654584 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 92

Conread position: 1091-1255
Cow position: chrX:1616481-1616317 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 91

Conread position: 1091-1255
Cow position: chrX:10916324-10916488 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 68

Conread position: 1091-1255
Cow position: chrX:20167729-20167888 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 54

Conread position: 1091-1255
Cow position: chrX:22284084-22284248 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 93

Conread position: 1101-1255
Cow position: chrX:38577118-38577267 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 44

Conread position: 1123-1255
Cow position: chrX:27288139-27288008 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1126-1255
Cow position: chrX:2300537-2300665 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1126-1255
Cow position: chrX:39700825-39700952 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 18

Show alignments to all cow chromosomes.