Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-283
Cow position: chr1:44102535-44102259 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 32

Conread position: 1-283
Cow position: chr1:93416110-93416389 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 126

Conread position: 1-814
Cow position: chr1:99021479-99020687 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 76

Conread position: 2-277
Cow position: chr1:29904591-29904315 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 85

Conread position: 2-283
Cow position: chr1:69063185-69062906 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 124

Conread position: 2-396
Cow position: chr1:39482724-39482352 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 15

Conread position: 2-815
Cow position: chr1:63500934-63501728 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 85

Conread position: 2-817
Cow position: chr1:19993204-19992410 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 3-273
Cow position: chr1:61739005-61738745 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 78

Conread position: 3-789
Cow position: chr1:33387778-33388543 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 123

Conread position: 6-501
Cow position: chr1:68219372-68218888 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 117

Conread position: 7-301
Cow position: chr1:27306485-27306195 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 163, 117

Conread position: 35-277
Cow position: chr1:31422707-31422463 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 99

Conread position: 113-763
Cow position: chr1:30058135-30058763 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 22

Conread position: 125-819
Cow position: chr1:101149417-101150113 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 143-819
Cow position: chr1:31331193-31330513 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 21

Conread position: 163-819
Cow position: chr1:82919044-82918384 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 169-819
Cow position: chr1:80556414-80555803 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 179-792
Cow position: chr1:72656630-72657240 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 79

Conread position: 180-795
Cow position: chr1:13645370-13645968 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 86

Conread position: 181-789
Cow position: chr1:62245001-62244397 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 78

Conread position: 181-804
Cow position: chr1:18406549-18405932 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 78

Conread position: 181-805
Cow position: chr1:87207774-87207161 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 101

Conread position: 181-819
Cow position: chr1:69536552-69537177 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 416
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 164, 85

Conread position: 198-795
Cow position: chr1:33850925-33851535 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 401
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 88, 38

Conread position: 198-805
Cow position: chr1:56722798-56723421 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 83

Conread position: 220-785
Cow position: chr1:33895345-33895926 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 220-789
Cow position: chr1:59210467-59209888 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 370
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 65

Conread position: 220-792
Cow position: chr1:57656227-57656798 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 220-795
Cow position: chr1:89900034-89899448 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 220-804
Cow position: chr1:82564172-82564769 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 220-805
Cow position: chr1:1461661-1461066 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 381
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 41

Conread position: 220-805
Cow position: chr1:8553995-8554595 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 380
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position: chr1:40053026-40053622 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 381
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 35

Conread position: 220-805
Cow position: chr1:55276812-55276218 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 35

Conread position: 220-805
Cow position: chr1:57367465-57366866 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 378
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 45

Conread position: 220-805
Cow position: chr1:62925280-62925880 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 220-805
Cow position: chr1:80359498-80358914 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 373
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 41

Conread position: 220-805
Cow position: chr1:85791363-85791953 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 382
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 109, 41

Conread position: 220-805
Cow position: chr1:88635045-88635637 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 220-805
Cow position: chr1:89771011-89770418 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 43

Conread position: 220-805
Cow position: chr1:91718970-91718372 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 383
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 61, 35

Conread position: 220-846
Cow position: chr1:68607881-68607238 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 41

Conread position: 228-689
Cow position: chr1:13879812-13880286 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 301
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 18

Conread position: 234-739
Cow position: chr1:31422551-31422060 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 37

Conread position: 236-805
Cow position: chr1:18244708-18244118 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 172

Conread position: 263-819
Cow position: chr1:18014480-18013907 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 266-792
Cow position: chr1:52359561-52359024 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 268-788
Cow position: chr1:21356884-21356391 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 26

Conread position: 271-795
Cow position: chr1:8824778-8825307 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 272-707
Cow position: chr1:3386289-3385838 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 295
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 272-792
Cow position: chr1:57567667-57568205 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 217

Conread position: 272-792
Cow position: chr1:76545823-76545286 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 339
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 127

Conread position: 272-796
Cow position: chr1:72187154-72186614 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 272-805
Cow position: chr1:28872794-28873340 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 272-805
Cow position: chr1:42736174-42736718 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 353
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 235

Conread position: 272-805
Cow position: chr1:79457250-79456706 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 349

Conread position: 272-805
Cow position: chr1:88130475-88131037 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 272-902
Cow position: chr1:76623228-76622598 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 273-805
Cow position: chr1:11292382-11291839 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 277-819
Cow position: chr1:99374698-99375232 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 280-777
Cow position: chr1:42290118-42290627 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 219

Conread position: 280-795
Cow position: chr1:101858254-101857729 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 280-805
Cow position: chr1:28801700-28801135 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 363
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 181

Conread position: 282-632
Cow position: chr1:87969080-87969440 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 15

Conread position: 285-819
Cow position: chr1:61738772-61738239 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 286-873
Cow position: chr1:30027806-30027215 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 8

Conread position: 291-723
Cow position: chr1:30574622-30574186 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 271
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 27

Conread position: 291-805
Cow position: chr1:56194193-56193665 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 343
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 40

Conread position: 291-805
Cow position: chr1:56489575-56490107 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 340
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 201

Conread position: 291-881
Cow position: chr1:56144592-56144001 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 6

Conread position: 294-736
Cow position: chr1:89425330-89425784 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 288
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 135

Conread position: 294-766
Cow position: chr1:86608939-86609431 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 325
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 13, 103

Conread position: 294-792
Cow position: chr1:89740506-89740015 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 321
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 84

Conread position: 294-795
Cow position: chr1:56163068-56163583 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 297-792
Cow position: chr1:52233356-52232862 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 297-805
Cow position: chr1:38414551-38415064 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 297-805
Cow position: chr1:61308745-61309269 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 194

Conread position: 297-805
Cow position: chr1:63606040-63605515 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 297-805
Cow position: chr1:76752907-76752387 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 188

Conread position: 300-736
Cow position: chr1:40307816-40308260 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 106, 29

Conread position: 300-805
Cow position: chr1:17036812-17036290 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 332
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 77

Conread position: 300-805
Cow position: chr1:67835392-67834873 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 339
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 154

Conread position: 300-805
Cow position: chr1:69766211-69766729 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 300-805
Cow position: chr1:71562829-71562307 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 56

Conread position: 300-805
Cow position: chr1:86548383-86547868 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 333
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 25

Conread position: 300-805
Cow position: chr1:91898746-91899263 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 57

Conread position: 300-805
Cow position: chr1:99349269-99348771 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 301-732
Cow position: chr1:38385540-38385096 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 37, 28

Conread position: 303-805
Cow position: chr1:40684939-40684424 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 329
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 22

Conread position: 306-626
Cow position: chr1:40513747-40513415 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 313

Conread position: 306-736
Cow position: chr1:29950554-29950122 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 154

Conread position: 306-754
Cow position: chr1:98783809-98784265 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 306-795
Cow position: chr1:67286244-67286742 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 305
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 87

Conread position: 306-805
Cow position: chr1:20828645-20829156 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 336
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 13

Conread position: 306-814
Cow position: chr1:53046027-53045524 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 232

Conread position: 309-803
Cow position: chr1:5318519-5319007 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 331
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 84, 11

Conread position: 309-805
Cow position: chr1:25180274-25179764 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 310-697
Cow position: chr1:28276400-28276796 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 18

Conread position: 311-792
Cow position: chr1:45097468-45097950 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 306
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 18

Conread position: 311-809
Cow position: chr1:27306210-27305731 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 333
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 143, 82

Conread position: 312-612
Cow position: chr1:32361354-32361047 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 89

Conread position: 313-801
Cow position: chr1:69287798-69287307 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 65

Conread position: 313-819
Cow position: chr1:77112674-77112171 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 330
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 21

Conread position: 328-864
Cow position: chr1:72981043-72981591 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 123

Conread position: 329-792
Cow position: chr1:58335613-58336088 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 300

Conread position: 329-792
Cow position: chr1:69402769-69403233 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 304
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 64, 243

Conread position: 329-792
Cow position: chr1:93854297-93854774 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 329-805
Cow position: chr1:86699441-86698951 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 0

Conread position: 329-819
Cow position: chr1:34689120-34689621 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 331
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 68, 36

Conread position: 329-819
Cow position: chr1:79336027-79335524 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 329-869
Cow position: chr1:102435251-102434712 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 124

Conread position: 333-805
Cow position: chr1:21087198-21087680 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 314
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 22

Conread position: 335-805
Cow position: chr1:87244582-87245077 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 69

Conread position: 338-805
Cow position: chr1:49974405-49973924 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 149

Conread position: 341-881
Cow position: chr1:79109086-79109616 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 116

Conread position: 346-817
Cow position: chr1:84149208-84149697 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 104

Conread position: 370-668
Cow position: chr1:15347768-15347456 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 120

Conread position: 375-792
Cow position: chr1:78289704-78290117 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 274
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 172

Conread position: 375-819
Cow position: chr1:72136466-72136920 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 381-805
Cow position: chr1:99910783-99911225 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 266

Conread position: 382-819
Cow position: chr1:33711896-33712344 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 188

Conread position: 385-805
Cow position: chr1:28710754-28711183 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 283
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 14

Conread position: 385-819
Cow position: chr1:82355566-82355995 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 19

Conread position: 385-820
Cow position: chr1:72080610-72081060 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 291
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 14

Conread position: 387-754
Cow position: chr1:44101904-44101535 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 387-878
Cow position: chr1:39482143-39481646 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 221

Conread position: 390-779
Cow position: chr1:23050679-23051074 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 66

Conread position: 390-814
Cow position: chr1:15025741-15026161 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 390-819
Cow position: chr1:25887313-25886882 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 21

Conread position: 391-819
Cow position: chr1:59644698-59645116 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 103

Conread position: 393-805
Cow position: chr1:12062352-12061930 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 272
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 7, 15

Conread position: 394-795
Cow position: chr1:62853994-62853589 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 269
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 19

Conread position: 401-713
Cow position: chr1:7144586-7144270 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 50, 125

Conread position: 405-795
Cow position: chr1:79637071-79636678 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 86

Conread position: 405-828
Cow position: chr1:48245668-48246103 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 406-803
Cow position: chr1:52918761-52918364 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 279

Conread position: 406-805
Cow position: chr1:13450070-13450473 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 71, 9

Conread position: 407-819
Cow position: chr1:73009660-73010056 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 424-805
Cow position: chr1:30283666-30283276 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 61

Conread position: 446-818
Cow position: chr1:32342177-32341800 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 159

Conread position: 466-781
Cow position: chr1:20988872-20989198 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 55, 98

Conread position: 471-819
Cow position: chr1:46835450-46835803 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 149

Conread position: 473-796
Cow position: chr1:67901991-67901673 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 75

Conread position: 474-805
Cow position: chr1:29362225-29362563 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 8

Conread position: 479-805
Cow position: chr1:73071124-73070790 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 0

Conread position: 508-792
Cow position: chr1:82924210-82923926 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 94

Conread position: 508-938
Cow position: chr1:58884100-58883672 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 83, 315

Conread position: 514-778
Cow position: chr1:88270622-88270367 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 76

Conread position: 521-805
Cow position: chr1:31396671-31396957 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 70, 221

Conread position: 521-805
Cow position: chr1:60339286-60339572 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 221

Conread position: 523-795
Cow position: chr1:55323072-55322801 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 35

Conread position: 523-819
Cow position: chr1:77655690-77655974 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 40

Conread position: 528-718
Cow position: chr1:77117603-77117411 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 528-815
Cow position: chr1:28722860-28723153 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 538-805
Cow position: chr1:85882001-85882268 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 53, 133

Conread position: 560-805
Cow position: chr1:94659706-94659948 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 116

Conread position: 567-805
Cow position: chr1:82913117-82912877 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 176

Conread position: 575-813
Cow position: chr1:98865114-98864878 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 581-819
Cow position: chr1:95239410-95239650 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 162

Conread position: 583-782
Cow position: chr1:66686488-66686292 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 162, 38

Conread position: 598-789
Cow position: chr1:5501992-5502184 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 604-818
Cow position: chr1:40953967-40954181 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 22

Conread position: 621-819
Cow position: chr1:38396310-38396510 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 123

Conread position: 621-819
Cow position: chr1:44138263-44138068 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 26

Conread position: 811-1164
Cow position: chr1:38396599-38396940 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 817-1060
Cow position: chr1:31421899-31421654 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 102

Conread position: 859-1130
Cow position: chr1:63501904-63502172 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 219, 81

Conread position: 930-1164
Cow position: chr1:98864614-98864374 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 77

Show alignments to all cow chromosomes.