Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-201
Cow position: chr10:6261775-6261574 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 144

Conread position: 1-660
Cow position: chr10:39881778-39881115 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 126

Conread position: 2-849
Cow position: chr10:21075871-21076693 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 85

Conread position: 36-819
Cow position: chr10:53363528-53364265 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 70

Conread position: 51-716
Cow position: chr10:28116888-28116235 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 89-819
Cow position: chr10:24978551-24977835 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 90-805
Cow position: chr10:8289551-8290268 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 448
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 38

Conread position: 181-819
Cow position: chr10:38345690-38345058 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 413
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 212, 77

Conread position: 220-792
Cow position: chr10:62778033-62778624 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 220-795
Cow position: chr10:11685969-11685391 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 220-795
Cow position: chr10:41566799-41567383 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 371
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chr10:21400976-21400381 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chr10:41157147-41157737 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 373
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 65

Conread position: 220-819
Cow position: chr10:14803526-14804140 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 391
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 65

Conread position: 220-819
Cow position: chr10:57559856-57559232 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 401
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 35

Conread position: 235-539
Cow position: chr10:64303250-64302952 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 152, 50

Conread position: 259-754
Cow position: chr10:10478410-10477902 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 335
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 113, 59

Conread position: 264-805
Cow position: chr10:39179518-39180073 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 270-805
Cow position: chr10:22100980-22101520 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 351
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 185

Conread position: 271-792
Cow position: chr10:7282943-7282410 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 213

Conread position: 272-640
Cow position: chr10:29846869-29846485 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 272-792
Cow position: chr10:62409111-62408580 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 272-805
Cow position: chr10:1375277-1375823 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 356
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 188

Conread position: 272-805
Cow position: chr10:25359140-25359689 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 272-805
Cow position: chr10:39041564-39041012 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 357
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 171

Conread position: 272-819
Cow position: chr10:21486657-21487219 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 272-841
Cow position: chr10:38538749-38538168 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 371
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 21, 56

Conread position: 273-805
Cow position: chr10:280874-280331 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 273-805
Cow position: chr10:21741003-21740462 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 346
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 10

Conread position: 273-805
Cow position: chr10:41876663-41877208 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 353
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 10

Conread position: 277-714
Cow position: chr10:38847124-38847557 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 281
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 7

Conread position: 278-798
Cow position: chr10:24314080-24313553 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 293

Conread position: 282-819
Cow position: chr10:47906534-47907082 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 43

Conread position: 291-792
Cow position: chr10:124072-124587 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 291-805
Cow position: chr10:32650495-32651023 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 39

Conread position: 293-880
Cow position: chr10:14859740-14860340 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 388
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 25

Conread position: 294-779
Cow position: chr10:24299090-24298590 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 330
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 167

Conread position: 295-805
Cow position: chr10:34685661-34686184 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 297-777
Cow position: chr10:29633092-29632601 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 276

Conread position: 297-795
Cow position: chr10:29696009-29696514 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 300-805
Cow position: chr10:25565473-25564968 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 324
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 93, 29

Conread position: 300-805
Cow position: chr10:39817580-39817073 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 56

Conread position: 300-820
Cow position: chr10:62216379-62216911 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 301-572
Cow position: chr10:20396547-20396816 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 24

Conread position: 306-665
Cow position: chr10:60489443-60489803 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 219
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 95

Conread position: 306-795
Cow position: chr10:19496499-19496006 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 317
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 87, 72

Conread position: 309-739
Cow position: chr10:276374-276813 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 309-805
Cow position: chr10:25498136-25498642 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 314-795
Cow position: chr10:13366066-13365590 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 316
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 17

Conread position: 328-864
Cow position: chr10:37769622-37770169 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 158

Conread position: 329-777
Cow position: chr10:19143538-19143076 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 298
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 50

Conread position: 329-805
Cow position: chr10:19511408-19511896 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 335-883
Cow position: chr10:34318455-34317930 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 357
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 66, 71

Conread position: 335-918
Cow position: chr10:46191181-46191756 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 374
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 65

Conread position: 337-519
Cow position: chr10:6260955-6260768 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 35

Conread position: 371-819
Cow position: chr10:41351911-41351456 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 176

Conread position: 374-818
Cow position: chr10:184110-184577 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 35

Conread position: 375-784
Cow position: chr10:57575460-57575883 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 272
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 32

Conread position: 377-819
Cow position: chr10:16475613-16476060 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 290
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 76

Conread position: 383-883
Cow position: chr10:3543715-3543225 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 320
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 23

Conread position: 385-805
Cow position: chr10:46694517-46694086 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 31

Conread position: 390-778
Cow position: chr10:38546360-38545962 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 254
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 104

Conread position: 390-880
Cow position: chr10:38404641-38404147 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 66, 37

Conread position: 394-739
Cow position: chr10:58377718-58377370 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 231
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 31

Conread position: 406-805
Cow position: chr10:39854133-39853720 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 0

Conread position: 406-923
Cow position: chr10:15862253-15861720 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 343
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 46, 85

Conread position: 427-912
Cow position: chr10:16925437-16925924 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 55

Conread position: 443-805
Cow position: chr10:2123342-2122972 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 472-819
Cow position: chr10:40152496-40152150 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 122, 34

Conread position: 488-882
Cow position: chr10:40751617-40752012 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 27, 91

Conread position: 511-819
Cow position: chr10:11820327-11820635 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 241

Conread position: 521-716
Cow position: chr10:39445135-39444939 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 79

Conread position: 534-819
Cow position: chr10:6260779-6260493 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 18

Conread position: 541-784
Cow position: chr10:10415429-10415668 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 136, 17

Conread position: 559-805
Cow position: chr10:33346643-33346890 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 48

Conread position: 567-819
Cow position: chr10:19758401-19758652 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 126

Conread position: 569-819
Cow position: chr10:23431864-23432115 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 13

Conread position: 574-752
Cow position: chr10:28931968-28931788 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 168

Conread position: 584-819
Cow position: chr10:20396796-20397010 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 12

Conread position: 601-816
Cow position: chr10:8328188-8327967 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 162

Conread position: 631-811
Cow position: chr10:64289171-64288987 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 15

Conread position: 638-795
Cow position: chr10:31523921-31524078 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 648-819
Cow position: chr10:39880918-39880742 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 103

Conread position: 750-1164
Cow position: chr10:64302793-64302370 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 217

Conread position: 785-986
Cow position: chr10:21076773-21076973 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 32

Conread position: 812-1164
Cow position: chr10:24977727-24977373 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 198

Conread position: 817-1164
Cow position: chr10:6260371-6260020 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 852-1056
Cow position: chr10:64288601-64288405 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 952-1164
Cow position: chr10:11820941-11821153 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 34

Show alignments to all cow chromosomes.