Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 1-246 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 127 |
| Conread position: | 1-283 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 124 |
| Conread position: | 1-689 |
| Cow position: | |
| Alignm length: | 695 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 127 |
| Conread position: | 1-819 |
| Cow position: | |
| Alignm length: | 832 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 6-206 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 6-206 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 28-303 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 86, 98 |
| Conread position: | 33-819 |
| Cow position: | |
| Alignm length: | 800 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 179-805 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 410 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 273, 87 |
| Conread position: | 181-756 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 80 |
| Conread position: | 184-805 |
| Cow position: | |
| Alignm length: | 629 |
| Alignm identity: | 399 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 137, 74 |
| Conread position: | 185-728 |
| Cow position: | |
| Alignm length: | 559 |
| Alignm identity: | 365 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 205-818 |
| Cow position: | |
| Alignm length: | 628 |
| Alignm identity: | 401 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 220-783 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 368 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 220-792 |
| Cow position: | |
| Alignm length: | 587 |
| Alignm identity: | 370 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 220-792 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 373 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 220-792 |
| Cow position: | |
| Alignm length: | 585 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 220-795 |
| Cow position: | |
| Alignm length: | 603 |
| Alignm identity: | 390 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 596 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 232, 41 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-823 |
| Cow position: | |
| Alignm length: | 624 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 227-827 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 232-819 |
| Cow position: | |
| Alignm length: | 612 |
| Alignm identity: | 389 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 271-643 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 271-792 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 184 |
| Conread position: | 272-792 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 343 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 272-792 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 272-804 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 350 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 272-819 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 187 |
| Conread position: | 272-881 |
| Cow position: | |
| Alignm length: | 629 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 191 |
| Conread position: | 272-881 |
| Cow position: | |
| Alignm length: | 628 |
| Alignm identity: | 398 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 273-804 |
| Cow position: | |
| Alignm length: | 548 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 273-805 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 277-739 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 282-768 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 282-819 |
| Cow position: | |
| Alignm length: | 553 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 283-805 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 294-730 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 295-795 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 255 |
| Conread position: | 297-819 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 127 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 523 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 162 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 309-695 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 309-805 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 309-805 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 330 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 310-801 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 311-818 |
| Cow position: | |
| Alignm length: | 525 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 319-818 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 329-756 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 329-760 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 329-792 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 258 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 409 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 329-819 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 316 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 65, 164 |
| Conread position: | 335-778 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 337-820 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 217 |
| Conread position: | 382-779 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 382-819 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 385-805 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 385-805 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 385-819 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 386-795 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 393-805 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 94, 6 |
| Conread position: | 406-763 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 407-680 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 152 |
| Conread position: | 418-732 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 418-732 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 427-821 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 450-823 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 474-804 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 477-798 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 477-818 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 478-791 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 508-805 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 234 |
| Conread position: | 508-805 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 83, 239 |
| Conread position: | 509-795 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 524-783 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 36 |
| Conread position: | 527-769 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 528-805 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 538-805 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 209 |
| Conread position: | 563-819 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 588-870 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 171 |
| Conread position: | 593-805 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 138 |
| Conread position: | 599-823 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 146 |
| Conread position: | 603-804 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 613-832 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 73, 126 |
| Conread position: | 686-1010 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 709-819 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 749-1143 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 812-1111 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 826-1164 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 36 |
Show alignments to all cow chromosomes.