Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 10-814 |
| Cow position: | chr12:17974980-17975761 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 91 |
| Conread position: | 198-792 |
| Cow position: | chr12:45261203-45261825 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 403 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 220-736 |
| Cow position: | chr12:26141429-26141960 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 339 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 220-795 |
| Cow position: | chr12:3360529-3361109 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 374 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 220-804 |
| Cow position: | chr12:32653163-32653758 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 376 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 220-820 |
| Cow position: | chr12:37558175-37558786 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 228-799 |
| Cow position: | chr12:1137211-1137782 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 234-784 |
| Cow position: | chr12:10483677-10484224 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 271-933 |
| Cow position: | chr12:27933281-27932603 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 184 |
| Conread position: | 278-751 |
| Cow position: | chr12:8982734-8982263 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 16 |
| Conread position: | 280-805 |
| Cow position: | chr12:2473-3015 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 286-819 |
| Cow position: | chr12:14693335-14693855 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 347 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 294-803 |
| Cow position: | chr12:21254967-21254443 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 164 |
| Conread position: | 297-774 |
| Cow position: | chr12:21207389-21207877 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 297-785 |
| Cow position: | chr12:6406955-6406453 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 300-777 |
| Cow position: | chr12:20998423-20997945 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 300-783 |
| Cow position: | chr12:21901638-21902130 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 300-795 |
| Cow position: | chr12:8310880-8311386 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 303 |
| Conread position: | 300-805 |
| Cow position: | chr12:43031688-43031170 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 29, 192 |
| Conread position: | 300-818 |
| Cow position: | chr12:21499817-21500331 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 343 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 300-819 |
| Cow position: | chr12:21426391-21426923 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 308-873 |
| Cow position: | chr12:15951551-15950984 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 346 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 309-805 |
| Cow position: | chr12:14662905-14662418 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 324-820 |
| Cow position: | chr12:28766296-28765789 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 328-819 |
| Cow position: | chr12:21941504-21941993 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 329-782 |
| Cow position: | chr12:8678393-8677929 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 329-805 |
| Cow position: | chr12:25101333-25100846 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 313 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 329-805 |
| Cow position: | chr12:42860089-42859612 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 309 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 64, 131 |
| Conread position: | 387-792 |
| Cow position: | chr12:2282337-2282748 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 392-760 |
| Cow position: | chr12:26947189-26946822 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 394-792 |
| Cow position: | chr12:22205951-22205545 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 427-819 |
| Cow position: | chr12:21227627-21227221 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 529-873 |
| Cow position: | chr12:2838917-2838575 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 601-805 |
| Cow position: | chr12:33986172-33986377 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 145 |
| Conread position: | 828-1126 |
| Cow position: | chr12:17976821-17977116 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 71, 181 |
Show alignments to all cow chromosomes.