Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 1-285 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 125 |
| Conread position: | 1-817 |
| Cow position: | |
| Alignm length: | 838 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 124 |
| Conread position: | 28-819 |
| Cow position: | |
| Alignm length: | 803 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 181-805 |
| Cow position: | |
| Alignm length: | 633 |
| Alignm identity: | 401 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 212, 79 |
| Conread position: | 181-882 |
| Cow position: | |
| Alignm length: | 710 |
| Alignm identity: | 443 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 340, 85 |
| Conread position: | 198-805 |
| Cow position: | |
| Alignm length: | 634 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 220-695 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 309 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 220-804 |
| Cow position: | |
| Alignm length: | 598 |
| Alignm identity: | 362 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 379 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 603 |
| Alignm identity: | 386 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 603 |
| Alignm identity: | 373 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 220-818 |
| Cow position: | |
| Alignm length: | 612 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 220-819 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 383 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 263-805 |
| Cow position: | |
| Alignm length: | 564 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 237 |
| Conread position: | 265-818 |
| Cow position: | |
| Alignm length: | 582 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 267-819 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 230 |
| Conread position: | 271-805 |
| Cow position: | |
| Alignm length: | 555 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 222 |
| Conread position: | 272-792 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 155 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 518 |
| Conread position: | 272-819 |
| Cow position: | |
| Alignm length: | 563 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 184 |
| Conread position: | 272-819 |
| Cow position: | |
| Alignm length: | 566 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 272-871 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 379 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 272-912 |
| Cow position: | |
| Alignm length: | 657 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 273-795 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 183 |
| Conread position: | 280-819 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 380 |
| Conread position: | 282-789 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 333 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 282-795 |
| Cow position: | |
| Alignm length: | 530 |
| Alignm identity: | 343 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 282-805 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 282-805 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 282-818 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 354 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 123 |
| Conread position: | 282-818 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 287-805 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 288-795 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 204 |
| Conread position: | 291-805 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 6 |
| Conread position: | 291-819 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 292-795 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 294-795 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 297-819 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 200 |
| Conread position: | 300-678 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 95, 155 |
| Conread position: | 300-756 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 523 |
| Alignm identity: | 342 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 309-805 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 318-727 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 328-815 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 329-607 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 329-792 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 126 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 310 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 335-795 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 335-823 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 349-819 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 375-805 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 382-805 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 385-774 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 385-792 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 385-818 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 385-819 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 391-819 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 392-795 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 394-795 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 254 |
| Conread position: | 405-781 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 427-805 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 431-792 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 278 |
| Conread position: | 451-879 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 64, 152 |
| Conread position: | 453-819 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 456-819 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 473-819 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 514-883 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 518-805 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 534-805 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 143, 7 |
| Conread position: | 538-805 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 129, 54 |
| Conread position: | 543-819 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 266 |
| Conread position: | 548-819 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 548-819 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 567-819 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 594-820 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 599-739 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 600-819 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 605-805 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 605-819 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 610-805 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 619-805 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 624-818 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 124, 116 |
| Conread position: | 771-1159 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 778-1164 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 812-1155 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 167, 203 |
| Conread position: | 824-1160 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 842-1153 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 210, 44 |
| Conread position: | 852-998 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 899-1164 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 81 |
Show alignments to all cow chromosomes.