Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-285
Cow position: chr14:39723089-39722808 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 1-817
Cow position: chr14:30707605-30706809 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 124

Conread position: 28-819
Cow position: chr14:48406563-48405805 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 181-805
Cow position: chr14:45712726-45712120 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 401
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 212, 79

Conread position: 181-882
Cow position: chr14:40170426-40169757 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 443
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 340, 85

Conread position: 198-805
Cow position: chr14:33394533-33393906 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 76

Conread position: 220-695
Cow position: chr14:46669601-46670068 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 309
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 27

Conread position: 220-804
Cow position: chr14:13272534-13273116 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 362
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 41

Conread position: 220-805
Cow position: chr14:9044836-9045436 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 379
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chr14:30585665-30585081 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 386
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chr14:45672772-45672175 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 373
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 108, 35

Conread position: 220-818
Cow position: chr14:47623843-47624448 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 220-819
Cow position: chr14:44130199-44130797 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 383
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 61, 30

Conread position: 263-805
Cow position: chr14:7831229-7830670 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 237

Conread position: 265-818
Cow position: chr14:43552731-43553304 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 267-819
Cow position: chr14:23260616-23260043 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 371
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 230

Conread position: 271-805
Cow position: chr14:749888-750440 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 344
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 222

Conread position: 272-792
Cow position: chr14:7471697-7472231 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 155

Conread position: 272-805
Cow position: chr14:28994534-28993984 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 272-805
Cow position: chr14:37223223-37223771 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 518

Conread position: 272-819
Cow position: chr14:22032361-22031804 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 184

Conread position: 272-819
Cow position: chr14:47589198-47589751 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 363
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 59

Conread position: 272-871
Cow position: chr14:13302352-13302961 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 379
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 115

Conread position: 272-912
Cow position: chr14:5528388-5529036 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 273-795
Cow position: chr14:11154831-11154306 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 183

Conread position: 280-819
Cow position: chr14:45850558-45851106 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 380

Conread position: 282-789
Cow position: chr14:35387800-35387296 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 333
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 88

Conread position: 282-795
Cow position: chr14:30597034-30596524 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 343
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 9

Conread position: 282-805
Cow position: chr14:29048566-29048033 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 128

Conread position: 282-805
Cow position: chr14:44421897-44422424 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 282-818
Cow position: chr14:33235337-33235847 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 354
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 111, 123

Conread position: 282-818
Cow position: chr14:43034542-43034010 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 18

Conread position: 287-805
Cow position: chr14:17684733-17685267 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 288-795
Cow position: chr14:23256696-23257219 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 335
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 204

Conread position: 291-805
Cow position: chr14:19328924-19328398 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 6

Conread position: 291-819
Cow position: chr14:16273955-16273412 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 346
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 90

Conread position: 292-795
Cow position: chr14:13660642-13660132 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 8

Conread position: 294-795
Cow position: chr14:44376781-44377297 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 330
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 37

Conread position: 297-805
Cow position: chr14:17001708-17001189 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 79

Conread position: 297-819
Cow position: chr14:44856078-44855543 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 344
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 200

Conread position: 300-678
Cow position: chr14:31607566-31607186 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 240
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 95, 155

Conread position: 300-756
Cow position: chr14:48254959-48254494 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 299
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 30

Conread position: 300-805
Cow position: chr14:36967612-36968125 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 342
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 29

Conread position: 309-805
Cow position: chr14:45767365-45767872 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 145

Conread position: 318-727
Cow position: chr14:45079905-45080312 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 257
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 11

Conread position: 328-815
Cow position: chr14:45833544-45834033 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 314
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 68

Conread position: 329-607
Cow position: chr14:47921387-47921671 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 131

Conread position: 329-792
Cow position: chr14:16920301-16919833 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 309
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 94

Conread position: 329-805
Cow position: chr14:17492076-17491586 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 314
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 122

Conread position: 329-805
Cow position: chr14:20781837-20782326 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 75

Conread position: 329-805
Cow position: chr14:22018786-22019261 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 126

Conread position: 329-805
Cow position: chr14:50109961-50110436 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 310
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 27

Conread position: 335-795
Cow position: chr14:14309677-14309219 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 311
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 111, 59

Conread position: 335-823
Cow position: chr14:45303973-45303475 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 67

Conread position: 349-819
Cow position: chr14:38816796-38816326 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 56

Conread position: 375-805
Cow position: chr14:23901374-23900930 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 295
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 18, 114

Conread position: 382-805
Cow position: chr14:46464509-46464942 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 17

Conread position: 385-774
Cow position: chr14:41755303-41755683 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 14

Conread position: 385-792
Cow position: chr14:15277136-15276723 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 273
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 14

Conread position: 385-818
Cow position: chr14:47654185-47654623 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 140

Conread position: 385-819
Cow position: chr14:50134514-50134957 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 276
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 14

Conread position: 391-819
Cow position: chr14:38532847-38532408 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 283
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 11

Conread position: 392-795
Cow position: chr14:44225860-44226257 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 264
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 14

Conread position: 394-795
Cow position: chr14:45029673-45029263 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 261
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 254

Conread position: 405-781
Cow position: chr14:2283800-2284185 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 78

Conread position: 427-805
Cow position: chr14:13778450-13778825 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 28

Conread position: 431-792
Cow position: chr14:41085296-41084928 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 278

Conread position: 451-879
Cow position: chr14:41407330-41407764 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 152

Conread position: 453-819
Cow position: chr14:13864574-13864198 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 456-819
Cow position: chr14:42123671-42123315 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 99

Conread position: 473-819
Cow position: chr14:9102563-9102237 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 156

Conread position: 514-883
Cow position: chr14:37414311-37413947 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 74, 85

Conread position: 518-805
Cow position: chr14:45916999-45917288 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 11

Conread position: 534-805
Cow position: chr14:13480135-13479864 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 143, 7

Conread position: 538-805
Cow position: chr14:22242486-22242751 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 54

Conread position: 543-819
Cow position: chr14:44287644-44287367 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 266

Conread position: 548-819
Cow position: chr14:19619831-19620104 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 53

Conread position: 548-819
Cow position: chr14:34775142-34775410 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 42

Conread position: 567-819
Cow position: chr14:5511453-5511706 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 100

Conread position: 594-820
Cow position: chr14:44551539-44551767 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 599-739
Cow position: chr14:42198255-42198393 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 54

Conread position: 600-819
Cow position: chr14:38146248-38146458 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 106

Conread position: 605-805
Cow position: chr14:45771105-45770909 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 22

Conread position: 605-819
Cow position: chr14:32534076-32533876 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 610-805
Cow position: chr14:48824257-48824453 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 39

Conread position: 619-805
Cow position: chr14:5201398-5201211 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 624-818
Cow position: chr14:45160786-45160980 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 116

Conread position: 771-1159
Cow position: chr14:9516253-9515854 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 9, 86

Conread position: 778-1164
Cow position: chr14:30706725-30706313 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 283
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 43

Conread position: 812-1155
Cow position: chr14:38816215-38815868 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 167, 203

Conread position: 824-1160
Cow position: chr14:33487566-33487913 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 83

Conread position: 842-1153
Cow position: chr14:46513184-46513502 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 210, 44

Conread position: 852-998
Cow position: chr14:42122935-42122785 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 41

Conread position: 899-1164
Cow position: chr14:34043940-34043670 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 25, 81

Show alignments to all cow chromosomes.