Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-279
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 127

Conread position: 1-435
Cow position:
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 59

Conread position: 28-643
Cow position:
Alignm length: 625
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 23

Conread position: 81-819
Cow position:
Alignm length: 743
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 6

Conread position: 91-795
Cow position:
Alignm length: 718
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 109-819
Cow position:
Alignm length: 726
Alignm identity: 431
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 196, 17

Conread position: 145-817
Cow position:
Alignm length: 692
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 121

Conread position: 147-714
Cow position:
Alignm length: 592
Alignm identity: 364
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 68

Conread position: 163-795
Cow position:
Alignm length: 659
Alignm identity: 420
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 103

Conread position: 163-795
Cow position:
Alignm length: 655
Alignm identity: 408
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 16, 10

Conread position: 177-818
Cow position:
Alignm length: 652
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 106

Conread position: 181-805
Cow position:
Alignm length: 630
Alignm identity: 399
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 79

Conread position: 184-804
Cow position:
Alignm length: 632
Alignm identity: 399
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 218, 75

Conread position: 185-475
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 250, 78

Conread position: 220-637
Cow position:
Alignm length: 436
Alignm identity: 275
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 35

Conread position: 220-735
Cow position:
Alignm length: 533
Alignm identity: 333
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 35

Conread position: 220-772
Cow position:
Alignm length: 568
Alignm identity: 364
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 76, 41

Conread position: 220-804
Cow position:
Alignm length: 604
Alignm identity: 379
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 65

Conread position: 220-805
Cow position:
Alignm length: 603
Alignm identity: 376
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position:
Alignm length: 605
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position:
Alignm length: 604
Alignm identity: 379
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 35

Conread position: 220-805
Cow position:
Alignm length: 609
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position:
Alignm length: 601
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 41

Conread position: 220-805
Cow position:
Alignm length: 606
Alignm identity: 379
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position:
Alignm length: 606
Alignm identity: 385
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 28, 48

Conread position: 220-819
Cow position:
Alignm length: 628
Alignm identity: 392
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 41

Conread position: 264-781
Cow position:
Alignm length: 537
Alignm identity: 344
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 102

Conread position: 269-805
Cow position:
Alignm length: 557
Alignm identity: 353
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 129

Conread position: 271-710
Cow position:
Alignm length: 459
Alignm identity: 288
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 89

Conread position: 272-805
Cow position:
Alignm length: 544
Alignm identity: 346
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 31

Conread position: 272-805
Cow position:
Alignm length: 553
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 319

Conread position: 272-805
Cow position:
Alignm length: 549
Alignm identity: 343
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 188

Conread position: 272-805
Cow position:
Alignm length: 556
Alignm identity: 361
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 86

Conread position: 272-805
Cow position:
Alignm length: 552
Alignm identity: 350
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 186

Conread position: 272-805
Cow position:
Alignm length: 546
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 388

Conread position: 272-819
Cow position:
Alignm length: 560
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 104

Conread position: 272-846
Cow position:
Alignm length: 602
Alignm identity: 383
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 58

Conread position: 272-902
Cow position:
Alignm length: 644
Alignm identity: 393
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 21, 188

Conread position: 273-805
Cow position:
Alignm length: 547
Alignm identity: 343
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 58

Conread position: 280-805
Cow position:
Alignm length: 549
Alignm identity: 341
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 52

Conread position: 281-819
Cow position:
Alignm length: 559
Alignm identity: 358
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 92

Conread position: 282-714
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 285-819
Cow position:
Alignm length: 542
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 6

Conread position: 287-795
Cow position:
Alignm length: 526
Alignm identity: 326
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 7

Conread position: 287-830
Cow position:
Alignm length: 556
Alignm identity: 345
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 22

Conread position: 290-586
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 291-844
Cow position:
Alignm length: 573
Alignm identity: 356
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 104

Conread position: 293-819
Cow position:
Alignm length: 537
Alignm identity: 341
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 26

Conread position: 294-719
Cow position:
Alignm length: 445
Alignm identity: 285
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 189

Conread position: 294-819
Cow position:
Alignm length: 544
Alignm identity: 336
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 23, 35

Conread position: 295-795
Cow position:
Alignm length: 510
Alignm identity: 321
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 24

Conread position: 297-777
Cow position:
Alignm length: 496
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 139

Conread position: 297-792
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 98

Conread position: 297-804
Cow position:
Alignm length: 525
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 309

Conread position: 297-820
Cow position:
Alignm length: 542
Alignm identity: 346
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 157

Conread position: 300-706
Cow position:
Alignm length: 425
Alignm identity: 270
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 192

Conread position: 300-781
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 119

Conread position: 300-805
Cow position:
Alignm length: 524
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 191

Conread position: 300-805
Cow position:
Alignm length: 525
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 161

Conread position: 303-795
Cow position:
Alignm length: 507
Alignm identity: 323
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 65

Conread position: 306-674
Cow position:
Alignm length: 373
Alignm identity: 233
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 149

Conread position: 309-789
Cow position:
Alignm length: 494
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 93

Conread position: 309-805
Cow position:
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 310-795
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 19, 184

Conread position: 310-819
Cow position:
Alignm length: 530
Alignm identity: 341
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 9

Conread position: 328-777
Cow position:
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 169

Conread position: 329-724
Cow position:
Alignm length: 410
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 25

Conread position: 329-792
Cow position:
Alignm length: 479
Alignm identity: 311
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 43

Conread position: 329-792
Cow position:
Alignm length: 478
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 257

Conread position: 329-793
Cow position:
Alignm length: 480
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 122

Conread position: 329-805
Cow position:
Alignm length: 488
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 452

Conread position: 329-805
Cow position:
Alignm length: 486
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 86

Conread position: 329-881
Cow position:
Alignm length: 567
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 492

Conread position: 329-913
Cow position:
Alignm length: 604
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 123

Conread position: 335-792
Cow position:
Alignm length: 474
Alignm identity: 304
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 38

Conread position: 335-805
Cow position:
Alignm length: 484
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 44

Conread position: 340-841
Cow position:
Alignm length: 519
Alignm identity: 321
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 53, 487

Conread position: 344-850
Cow position:
Alignm length: 523
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 373-795
Cow position:
Alignm length: 432
Alignm identity: 273
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 81

Conread position: 382-783
Cow position:
Alignm length: 414
Alignm identity: 270
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 17

Conread position: 382-792
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 382-819
Cow position:
Alignm length: 447
Alignm identity: 287
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 176

Conread position: 385-795
Cow position:
Alignm length: 422
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 14

Conread position: 385-819
Cow position:
Alignm length: 446
Alignm identity: 283
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 67, 327

Conread position: 394-819
Cow position:
Alignm length: 434
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 62

Conread position: 401-803
Cow position:
Alignm length: 405
Alignm identity: 277
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 120, 17

Conread position: 405-795
Cow position:
Alignm length: 394
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 50

Conread position: 405-805
Cow position:
Alignm length: 413
Alignm identity: 270
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 51, 83

Conread position: 407-818
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 136

Conread position: 413-823
Cow position:
Alignm length: 415
Alignm identity: 263
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 91

Conread position: 439-819
Cow position:
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 165

Conread position: 454-908
Cow position:
Alignm length: 462
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 223, 264

Conread position: 455-820
Cow position:
Alignm length: 374
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 26

Conread position: 456-783
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 144

Conread position: 474-795
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 8

Conread position: 508-805
Cow position:
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 514-753
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 43

Conread position: 514-819
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 189

Conread position: 521-795
Cow position:
Alignm length: 278
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 70, 185

Conread position: 521-819
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 161, 68

Conread position: 528-815
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 63, 115

Conread position: 529-819
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 128

Conread position: 539-846
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 52, 221

Conread position: 548-817
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 42

Conread position: 557-790
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 31

Conread position: 567-805
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 182

Conread position: 574-805
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 87

Conread position: 577-805
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 53

Conread position: 593-847
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 179

Conread position: 598-805
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 145

Conread position: 598-819
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 602-819
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 157

Conread position: 652-819
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 138, 99

Conread position: 660-819
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 54

Conread position: 670-819
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 782-1164
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 16

Conread position: 822-1164
Cow position:
Alignm length: 374
Alignm identity: 261
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 96

Conread position: 854-1128
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 77, 7

Conread position: 859-1130
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 61

Show alignments to all cow chromosomes.