Cow genome map
Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
Conread position: | 1-324 |
Cow position: | chr16:28439042-28438718 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 215 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 109, 124 |
Conread position: | 1-649 |
Cow position: | chr16:14669024-14669658 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 50 |
Conread position: | 1-835 |
Cow position: | chr16:24155685-24154894 (view UCSC Genome Browser custom track) |
Alignm length: | 849 |
Alignm identity: | 596 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 70 |
Conread position: | 7-194 |
Cow position: | chr16:25293102-25293281 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 163, 105 |
Conread position: | 51-230 |
Cow position: | chr16:23872775-23872595 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 101, 73 |
Conread position: | 88-264 |
Cow position: | chr16:41759049-41758872 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 140 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 20, 41 |
Conread position: | 132-581 |
Cow position: | chr16:55080493-55080059 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 311 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 38, 51 |
Conread position: | 181-805 |
Cow position: | chr16:23982219-23982835 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 78 |
Conread position: | 181-805 |
Cow position: | chr16:25458567-25457941 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 407 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 206, 77 |
Conread position: | 186-483 |
Cow position: | chr16:25293511-25293797 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 209 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 196, 30 |
Conread position: | 220-789 |
Cow position: | chr16:15565676-15566252 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 41 |
Conread position: | 220-795 |
Cow position: | chr16:2239804-2239218 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 371 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 35, 72 |
Conread position: | 220-805 |
Cow position: | chr16:6942548-6943156 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 389 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 61, 35 |
Conread position: | 220-819 |
Cow position: | chr16:28171434-28170825 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 41 |
Conread position: | 221-805 |
Cow position: | chr16:5918412-5919007 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 34 |
Conread position: | 221-805 |
Cow position: | chr16:25157290-25156699 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 361 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 35, 52 |
Conread position: | 259-819 |
Cow position: | chr16:25166685-25167201 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 23 |
Conread position: | 270-727 |
Cow position: | chr16:4303496-4303031 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 291 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 16, 29 |
Conread position: | 271-805 |
Cow position: | chr16:12538950-12538401 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 409 |
Conread position: | 272-789 |
Cow position: | chr16:10437233-10437751 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 127 |
Conread position: | 272-799 |
Cow position: | chr16:31592930-31592386 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 60 |
Conread position: | 272-805 |
Cow position: | chr16:2484161-2483618 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 349 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 24, 127 |
Conread position: | 272-805 |
Cow position: | chr16:15491683-15492233 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 63 |
Conread position: | 272-869 |
Cow position: | chr16:25340947-25341551 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 180 |
Conread position: | 273-792 |
Cow position: | chr16:10204438-10203919 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 342 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 23, 191 |
Conread position: | 273-795 |
Cow position: | chr16:28472119-28471587 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 340 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 23, 210 |
Conread position: | 276-792 |
Cow position: | chr16:42740441-42739912 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 326 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 7, 187 |
Conread position: | 280-805 |
Cow position: | chr16:6549536-6549000 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 60 |
Conread position: | 280-805 |
Cow position: | chr16:7905628-7906143 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 336 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 50, 76 |
Conread position: | 280-819 |
Cow position: | chr16:20255322-20254773 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 48 |
Conread position: | 282-680 |
Cow position: | chr16:32605816-32606227 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 257 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 48, 24 |
Conread position: | 291-819 |
Cow position: | chr16:28438787-28438248 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 169 |
Conread position: | 294-785 |
Cow position: | chr16:36232606-36232111 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 328 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 37, 62 |
Conread position: | 294-819 |
Cow position: | chr16:51685441-51685973 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 86 |
Conread position: | 297-681 |
Cow position: | chr16:1430229-1430623 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 255 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 31, 157 |
Conread position: | 300-657 |
Cow position: | chr16:29676301-29675935 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 243 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 29, 309 |
Conread position: | 300-805 |
Cow position: | chr16:5660865-5661374 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 335 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 29, 158 |
Conread position: | 300-805 |
Cow position: | chr16:11052176-11052684 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 102 |
Conread position: | 303-805 |
Cow position: | chr16:36282406-36282921 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 342 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 27, 53 |
Conread position: | 303-819 |
Cow position: | chr16:31757-32276 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 328 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 27, 37 |
Conread position: | 309-792 |
Cow position: | chr16:40297159-40296667 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 326 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 41, 49 |
Conread position: | 309-805 |
Cow position: | chr16:49257548-49257059 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 327 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 202, 37 |
Conread position: | 309-818 |
Cow position: | chr16:25084637-25085158 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 334 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 14, 149 |
Conread position: | 309-861 |
Cow position: | chr16:43898253-43897685 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 368 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 327-819 |
Cow position: | chr16:10808200-10808688 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 322 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 79, 66 |
Conread position: | 329-714 |
Cow position: | chr16:16276469-16276074 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 254 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 329-805 |
Cow position: | chr16:1568414-1567930 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 25 |
Conread position: | 329-805 |
Cow position: | chr16:8817069-8816580 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 90 |
Conread position: | 329-805 |
Cow position: | chr16:27734769-27734278 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 317 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 329-805 |
Cow position: | chr16:29046056-29046546 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 329-818 |
Cow position: | chr16:36362312-36361825 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 329 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 32, 43 |
Conread position: | 329-819 |
Cow position: | chr16:836073-836567 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 15 |
Conread position: | 329-864 |
Cow position: | chr16:15183842-15184385 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 346 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 76, 67 |
Conread position: | 329-881 |
Cow position: | chr16:2411934-2411374 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 361 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 64, 123 |
Conread position: | 330-805 |
Cow position: | chr16:23253467-23252983 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 122 |
Conread position: | 335-795 |
Cow position: | chr16:56551170-56551634 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 314 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 58, 117 |
Conread position: | 347-585 |
Cow position: | chr16:41758409-41758175 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 108, 55 |
Conread position: | 369-644 |
Cow position: | chr16:29091908-29091625 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 211 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 24, 202 |
Conread position: | 370-795 |
Cow position: | chr16:34529402-34529835 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 375-819 |
Cow position: | chr16:39820720-39821168 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 385-816 |
Cow position: | chr16:335393-335827 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 391-783 |
Cow position: | chr16:9929647-9930042 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 267 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 393-798 |
Cow position: | chr16:42051267-42050870 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 267 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 72, 8 |
Conread position: | 405-805 |
Cow position: | chr16:14666715-14666305 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 78 |
Conread position: | 405-805 |
Cow position: | chr16:25187757-25188166 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 272 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 51, 83 |
Conread position: | 406-788 |
Cow position: | chr16:5651868-5652243 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 254 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 50, 94 |
Conread position: | 408-819 |
Cow position: | chr16:5483441-5483861 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 7 |
Conread position: | 464-819 |
Cow position: | chr16:25294019-25294368 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 53 |
Conread position: | 473-820 |
Cow position: | chr16:16029972-16030323 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 243 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 40, 91 |
Conread position: | 494-817 |
Cow position: | chr16:10566074-10565746 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 218 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 17, 135 |
Conread position: | 518-805 |
Cow position: | chr16:9777321-9777609 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 199 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 73, 89 |
Conread position: | 522-805 |
Cow position: | chr16:19713645-19713365 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 67, 59 |
Conread position: | 524-819 |
Cow position: | chr16:33611838-33611539 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 202 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 70, 111 |
Conread position: | 528-731 |
Cow position: | chr16:2728055-2727855 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 533-805 |
Cow position: | chr16:53045603-53045878 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 157 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 58, 215 |
Conread position: | 595-819 |
Cow position: | chr16:41758134-41757910 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 616-819 |
Cow position: | chr16:13018434-13018638 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 46, 37 |
Conread position: | 679-819 |
Cow position: | chr16:48626632-48626769 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 782-1164 |
Cow position: | chr16:25170571-25170941 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 260 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 162, 19 |
Conread position: | 823-1131 |
Cow position: | chr16:28438135-28437823 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 223 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 22, 110 |
Conread position: | 828-976 |
Cow position: | chr16:41757252-41757106 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 119, 39 |
Conread position: | 968-1131 |
Cow position: | chr16:41756896-41756733 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 89, 37 |
Show alignments to all cow chromosomes.