Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 131-795
Cow position: chr17:2249147-2248492 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 418
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 343, 124

Conread position: 179-803
Cow position: chr17:23857558-23856934 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 184-772
Cow position: chr17:16860082-16859492 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 382
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 176, 71

Conread position: 185-805
Cow position: chr17:14893646-14894255 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 409
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 190, 38

Conread position: 186-711
Cow position: chr17:15381496-15381988 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 61

Conread position: 196-795
Cow position: chr17:2173365-2173970 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 390
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 175, 41

Conread position: 198-819
Cow position: chr17:43988021-43988649 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 86

Conread position: 217-805
Cow position: chr17:6089663-6089059 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 39

Conread position: 220-727
Cow position: chr17:22160418-22160940 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 330
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 35

Conread position: 220-774
Cow position: chr17:24780550-24781118 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 41

Conread position: 220-804
Cow position: chr17:14217522-14216922 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 383
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chr17:1383309-1382712 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 220-805
Cow position: chr17:9653947-9653354 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position: chr17:15435297-15435893 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 35

Conread position: 220-805
Cow position: chr17:20666224-20665624 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 382
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 28, 65

Conread position: 220-805
Cow position: chr17:24633459-24634056 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 35

Conread position: 220-823
Cow position: chr17:8208613-8209227 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 66

Conread position: 264-819
Cow position: chr17:35591760-35592330 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 271-805
Cow position: chr17:4059658-4060201 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 350
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 63

Conread position: 272-789
Cow position: chr17:25737216-25737749 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 344
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 111

Conread position: 272-805
Cow position: chr17:228744-228206 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 352
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 13

Conread position: 272-805
Cow position: chr17:19269812-19269264 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 126

Conread position: 281-819
Cow position: chr17:6002453-6001902 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 363
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 8, 82

Conread position: 282-805
Cow position: chr17:22429916-22429392 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 340
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 9

Conread position: 285-805
Cow position: chr17:3643267-3642734 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 290-779
Cow position: chr17:4286666-4287156 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 98

Conread position: 291-726
Cow position: chr17:20401255-20401696 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 286
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 33

Conread position: 292-560
Cow position: chr17:13893959-13893687 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 254

Conread position: 292-805
Cow position: chr17:13929242-13929770 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 5

Conread position: 295-805
Cow position: chr17:27345384-27345900 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 342
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 56

Conread position: 297-778
Cow position: chr17:18104102-18103605 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 323
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 162

Conread position: 300-795
Cow position: chr17:2261691-2262198 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 331
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 172

Conread position: 300-805
Cow position: chr17:15157378-15156862 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 329
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 153

Conread position: 300-805
Cow position: chr17:16889708-16890226 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 194

Conread position: 300-819
Cow position: chr17:152883-152360 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 330
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 51

Conread position: 309-795
Cow position: chr17:20183633-20183139 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 319
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 185

Conread position: 309-805
Cow position: chr17:11088129-11087622 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 87

Conread position: 329-778
Cow position: chr17:14325881-14325432 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 294
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 150

Conread position: 329-792
Cow position: chr17:13857161-13856680 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 316
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 23

Conread position: 329-804
Cow position: chr17:1946588-1947070 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 306
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 244

Conread position: 329-819
Cow position: chr17:44853316-44852817 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 314
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 109, 65

Conread position: 335-804
Cow position: chr17:18185906-18185434 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 306
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 189

Conread position: 338-792
Cow position: chr17:15850019-15850486 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 312
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 114

Conread position: 361-805
Cow position: chr17:15143723-15143265 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 303
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 50

Conread position: 390-805
Cow position: chr17:2287065-2287488 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 111

Conread position: 405-792
Cow position: chr17:22131926-22132317 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 79

Conread position: 405-805
Cow position: chr17:6259537-6259946 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 47

Conread position: 406-757
Cow position: chr17:4671890-4672237 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 7

Conread position: 406-789
Cow position: chr17:20088037-20087658 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 99

Conread position: 450-805
Cow position: chr17:18027017-18026655 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 5

Conread position: 474-843
Cow position: chr17:2555887-2556263 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 8

Conread position: 521-819
Cow position: chr17:16418018-16417722 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 222

Conread position: 528-805
Cow position: chr17:23324630-23324352 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 16

Conread position: 530-755
Cow position: chr17:2579457-2579677 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 147, 43

Conread position: 532-805
Cow position: chr17:181191-181465 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 210

Conread position: 563-773
Cow position: chr17:18325133-18324922 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 33

Conread position: 579-789
Cow position: chr17:40804692-40804902 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 12

Conread position: 595-804
Cow position: chr17:249827-250040 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 56

Conread position: 836-1152
Cow position: chr17:15384121-15384443 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 99, 181

Show alignments to all cow chromosomes.