Cow genome map
Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
Conread position: | 131-795 |
Cow position: | chr17:2249147-2248492 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 418 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 343, 124 |
Conread position: | 179-803 |
Cow position: | chr17:23857558-23856934 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 11 |
Conread position: | 184-772 |
Cow position: | chr17:16860082-16859492 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 382 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 176, 71 |
Conread position: | 185-805 |
Cow position: | chr17:14893646-14894255 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 409 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 190, 38 |
Conread position: | 186-711 |
Cow position: | chr17:15381496-15381988 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 61 |
Conread position: | 196-795 |
Cow position: | chr17:2173365-2173970 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 390 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 175, 41 |
Conread position: | 198-819 |
Cow position: | chr17:43988021-43988649 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 86 |
Conread position: | 217-805 |
Cow position: | chr17:6089663-6089059 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 39 |
Conread position: | 220-727 |
Cow position: | chr17:22160418-22160940 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 330 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 61, 35 |
Conread position: | 220-774 |
Cow position: | chr17:24780550-24781118 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 41 |
Conread position: | 220-804 |
Cow position: | chr17:14217522-14216922 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 383 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 41, 65 |
Conread position: | 220-805 |
Cow position: | chr17:1383309-1382712 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 34 |
Conread position: | 220-805 |
Cow position: | chr17:9653947-9653354 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 35 |
Conread position: | 220-805 |
Cow position: | chr17:15435297-15435893 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 35 |
Conread position: | 220-805 |
Cow position: | chr17:20666224-20665624 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 382 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 28, 65 |
Conread position: | 220-805 |
Cow position: | chr17:24633459-24634056 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 35 |
Conread position: | 220-823 |
Cow position: | chr17:8208613-8209227 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 66 |
Conread position: | 264-819 |
Cow position: | chr17:35591760-35592330 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 68 |
Conread position: | 271-805 |
Cow position: | chr17:4059658-4060201 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 350 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 25, 63 |
Conread position: | 272-789 |
Cow position: | chr17:25737216-25737749 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 344 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 24, 111 |
Conread position: | 272-805 |
Cow position: | chr17:228744-228206 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 352 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 272-805 |
Cow position: | chr17:19269812-19269264 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 126 |
Conread position: | 281-819 |
Cow position: | chr17:6002453-6001902 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 363 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 8, 82 |
Conread position: | 282-805 |
Cow position: | chr17:22429916-22429392 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 340 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 49, 9 |
Conread position: | 285-805 |
Cow position: | chr17:3643267-3642734 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 24 |
Conread position: | 290-779 |
Cow position: | chr17:4286666-4287156 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 336 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 30, 98 |
Conread position: | 291-726 |
Cow position: | chr17:20401255-20401696 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 286 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 292-560 |
Cow position: | chr17:13893959-13893687 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 189 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 37, 254 |
Conread position: | 292-805 |
Cow position: | chr17:13929242-13929770 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 5 |
Conread position: | 295-805 |
Cow position: | chr17:27345384-27345900 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 342 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 34, 56 |
Conread position: | 297-778 |
Cow position: | chr17:18104102-18103605 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 323 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 31, 162 |
Conread position: | 300-795 |
Cow position: | chr17:2261691-2262198 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 331 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 29, 172 |
Conread position: | 300-805 |
Cow position: | chr17:15157378-15156862 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 329 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 29, 153 |
Conread position: | 300-805 |
Cow position: | chr17:16889708-16890226 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 194 |
Conread position: | 300-819 |
Cow position: | chr17:152883-152360 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 330 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 30, 51 |
Conread position: | 309-795 |
Cow position: | chr17:20183633-20183139 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 319 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 84, 185 |
Conread position: | 309-805 |
Cow position: | chr17:11088129-11087622 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 87 |
Conread position: | 329-778 |
Cow position: | chr17:14325881-14325432 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 294 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 54, 150 |
Conread position: | 329-792 |
Cow position: | chr17:13857161-13856680 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 316 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 42, 23 |
Conread position: | 329-804 |
Cow position: | chr17:1946588-1947070 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 306 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 58, 244 |
Conread position: | 329-819 |
Cow position: | chr17:44853316-44852817 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 314 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 109, 65 |
Conread position: | 335-804 |
Cow position: | chr17:18185906-18185434 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 306 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 58, 189 |
Conread position: | 338-792 |
Cow position: | chr17:15850019-15850486 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 312 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 55, 114 |
Conread position: | 361-805 |
Cow position: | chr17:15143723-15143265 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 303 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 10, 50 |
Conread position: | 390-805 |
Cow position: | chr17:2287065-2287488 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 111 |
Conread position: | 405-792 |
Cow position: | chr17:22131926-22132317 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 261 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 40, 79 |
Conread position: | 405-805 |
Cow position: | chr17:6259537-6259946 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 276 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 69, 47 |
Conread position: | 406-757 |
Cow position: | chr17:4671890-4672237 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 240 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 59, 7 |
Conread position: | 406-789 |
Cow position: | chr17:20088037-20087658 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 257 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 450-805 |
Cow position: | chr17:18027017-18026655 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 245 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 65, 5 |
Conread position: | 474-843 |
Cow position: | chr17:2555887-2556263 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 253 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 37, 8 |
Conread position: | 521-819 |
Cow position: | chr17:16418018-16417722 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 200 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 73, 222 |
Conread position: | 528-805 |
Cow position: | chr17:23324630-23324352 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 63, 16 |
Conread position: | 530-755 |
Cow position: | chr17:2579457-2579677 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 154 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 147, 43 |
Conread position: | 532-805 |
Cow position: | chr17:181191-181465 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 156 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 150, 210 |
Conread position: | 563-773 |
Cow position: | chr17:18325133-18324922 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 17, 33 |
Conread position: | 579-789 |
Cow position: | chr17:40804692-40804902 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 7, 12 |
Conread position: | 595-804 |
Cow position: | chr17:249827-250040 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 108, 56 |
Conread position: | 836-1152 |
Cow position: | chr17:15384121-15384443 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 229 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 99, 181 |
Show alignments to all cow chromosomes.