Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-283
Cow position: chr22:8873301-8873583 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 127

Conread position: 1-295
Cow position: chr22:36581664-36581383 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 16

Conread position: 1-519
Cow position: chr22:35943970-35943475 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 24

Conread position: 1-522
Cow position: chr22:10964617-10965113 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 78

Conread position: 30-295
Cow position: chr22:293703-293443 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 95

Conread position: 37-420
Cow position: chr22:41237022-41237394 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 251
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 89

Conread position: 69-793
Cow position: chr22:1321085-1321800 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 459
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 22

Conread position: 181-819
Cow position: chr22:1270906-1270304 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 400
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 51

Conread position: 188-795
Cow position: chr22:46636110-46635507 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 373
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 27

Conread position: 220-630
Cow position: chr22:6984872-6985296 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 271
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 35

Conread position: 220-696
Cow position: chr22:37265069-37265562 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 309
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 41

Conread position: 220-754
Cow position: chr22:24949447-24949996 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 355
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 65

Conread position: 220-795
Cow position: chr22:3278732-3278146 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 371
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 110, 35

Conread position: 220-795
Cow position: chr22:16200112-16200681 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 368
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 65

Conread position: 220-805
Cow position: chr22:5233679-5233088 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 35

Conread position: 220-805
Cow position: chr22:35672738-35672139 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 383
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 65

Conread position: 220-869
Cow position: chr22:36861913-36861252 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 260-819
Cow position: chr22:871188-870635 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 17

Conread position: 271-939
Cow position: chr22:34167998-34168677 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 62

Conread position: 272-714
Cow position: chr22:15851009-15851455 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 288
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 84

Conread position: 272-792
Cow position: chr22:561032-560501 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 272-805
Cow position: chr22:44933647-44934196 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 272-869
Cow position: chr22:21589000-21589602 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 105

Conread position: 272-869
Cow position: chr22:39469850-39469245 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 299

Conread position: 273-792
Cow position: chr22:31313013-31313545 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 273-823
Cow position: chr22:44489563-44490123 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 357
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 10

Conread position: 279-805
Cow position: chr22:327471-326953 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 343
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 12

Conread position: 280-805
Cow position: chr22:118139-117625 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 343
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 115

Conread position: 282-804
Cow position: chr22:10546331-10546861 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 43

Conread position: 286-792
Cow position: chr22:8136513-8135997 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 320
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 204

Conread position: 286-819
Cow position: chr22:293480-292939 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 8

Conread position: 288-805
Cow position: chr22:46853036-46853559 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 337
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 67

Conread position: 294-642
Cow position: chr22:13737759-13737420 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 171

Conread position: 294-805
Cow position: chr22:27310086-27309556 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 200

Conread position: 294-873
Cow position: chr22:7277213-7277803 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 179

Conread position: 295-795
Cow position: chr22:6503977-6503470 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 330
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 35

Conread position: 295-805
Cow position: chr22:39882481-39881959 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 297-789
Cow position: chr22:17329046-17328538 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 297-789
Cow position: chr22:19144004-19143498 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 297-805
Cow position: chr22:693325-693843 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 194

Conread position: 297-805
Cow position: chr22:1319089-1319614 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 297-805
Cow position: chr22:5672432-5672954 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 77

Conread position: 297-819
Cow position: chr22:31335339-31334807 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 180

Conread position: 300-795
Cow position: chr22:32485633-32485146 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 319
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 93, 29

Conread position: 300-805
Cow position: chr22:44369921-44369409 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 330
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 155

Conread position: 303-805
Cow position: chr22:1878491-1879010 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 329
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 26, 155

Conread position: 304-805
Cow position: chr22:36736471-36736976 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 307-805
Cow position: chr22:11030664-11031177 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 328
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 6, 112

Conread position: 309-795
Cow position: chr22:5933272-5932790 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 323
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 21

Conread position: 310-816
Cow position: chr22:11782821-11782304 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 313-750
Cow position: chr22:37131363-37131806 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 61

Conread position: 329-805
Cow position: chr22:42990899-42991389 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 123

Conread position: 329-819
Cow position: chr22:8149807-8149328 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 187

Conread position: 329-819
Cow position: chr22:18816654-18816154 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 334-729
Cow position: chr22:27386699-27386290 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 118

Conread position: 359-819
Cow position: chr22:298567-298110 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 385-805
Cow position: chr22:536889-537318 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 14

Conread position: 385-819
Cow position: chr22:15314160-15313721 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 289
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 14

Conread position: 385-819
Cow position: chr22:33350958-33351412 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 311
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 71, 21

Conread position: 405-815
Cow position: chr22:158095-157676 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 184

Conread position: 406-818
Cow position: chr22:307416-307817 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 274
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 138

Conread position: 407-819
Cow position: chr22:34606872-34607288 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 202

Conread position: 413-795
Cow position: chr22:13675344-13674965 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 245
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 32

Conread position: 413-805
Cow position: chr22:13917318-13917720 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 265
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 35

Conread position: 428-805
Cow position: chr22:36533907-36533526 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 48

Conread position: 473-795
Cow position: chr22:46547787-46547457 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 477-819
Cow position: chr22:36581285-36580954 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 71

Conread position: 485-819
Cow position: chr22:8874883-8875218 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 498-749
Cow position: chr22:45975879-45976130 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 34

Conread position: 508-795
Cow position: chr22:10909920-10909626 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 147

Conread position: 508-805
Cow position: chr22:6020580-6020879 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 234

Conread position: 521-792
Cow position: chr22:44396382-44396654 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 174

Conread position: 529-795
Cow position: chr22:41419755-41419487 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 85

Conread position: 529-883
Cow position: chr22:309717-310069 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 221
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 72

Conread position: 540-819
Cow position: chr22:9273389-9273665 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 21

Conread position: 541-819
Cow position: chr22:41238126-41238403 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 55

Conread position: 548-819
Cow position: chr22:35943250-35942979 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 574-819
Cow position: chr22:21365423-21365165 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 26

Conread position: 582-805
Cow position: chr22:525703-525476 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 603-759
Cow position: chr22:44475258-44475415 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 619-805
Cow position: chr22:18027310-18027496 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 121

Conread position: 812-956
Cow position: chr22:36552783-36552634 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 812-1160
Cow position: chr22:8875551-8875919 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 102

Conread position: 812-1164
Cow position: chr22:36580846-36580481 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 132

Conread position: 812-1164
Cow position: chr22:36591483-36591124 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 814-1152
Cow position: chr22:292518-292176 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 197

Conread position: 817-1163
Cow position: chr22:297978-297625 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 101, 191

Conread position: 949-1164
Cow position: chr22:36552352-36552136 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 56

Show alignments to all cow chromosomes.