Cow genome map
Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
Conread position: | 1-283 |
Cow position: | chr22:8873301-8873583 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 127 |
Conread position: | 1-295 |
Cow position: | chr22:36581664-36581383 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 16 |
Conread position: | 1-519 |
Cow position: | chr22:35943970-35943475 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 24 |
Conread position: | 1-522 |
Cow position: | chr22:10964617-10965113 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 78 |
Conread position: | 30-295 |
Cow position: | chr22:293703-293443 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 95 |
Conread position: | 37-420 |
Cow position: | chr22:41237022-41237394 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 251 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 53, 89 |
Conread position: | 69-793 |
Cow position: | chr22:1321085-1321800 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 459 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 116, 22 |
Conread position: | 181-819 |
Cow position: | chr22:1270906-1270304 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 400 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 93, 51 |
Conread position: | 188-795 |
Cow position: | chr22:46636110-46635507 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 373 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 220-630 |
Cow position: | chr22:6984872-6985296 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 271 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 35 |
Conread position: | 220-696 |
Cow position: | chr22:37265069-37265562 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 309 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 220-754 |
Cow position: | chr22:24949447-24949996 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 355 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 41, 65 |
Conread position: | 220-795 |
Cow position: | chr22:3278732-3278146 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 371 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 110, 35 |
Conread position: | 220-795 |
Cow position: | chr22:16200112-16200681 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 368 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 36, 65 |
Conread position: | 220-805 |
Cow position: | chr22:5233679-5233088 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 35 |
Conread position: | 220-805 |
Cow position: | chr22:35672738-35672139 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 383 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 41, 65 |
Conread position: | 220-869 |
Cow position: | chr22:36861913-36861252 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 35 |
Conread position: | 260-819 |
Cow position: | chr22:871188-870635 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 17 |
Conread position: | 271-939 |
Cow position: | chr22:34167998-34168677 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 62 |
Conread position: | 272-714 |
Cow position: | chr22:15851009-15851455 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 288 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 24, 84 |
Conread position: | 272-792 |
Cow position: | chr22:561032-560501 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 183 |
Conread position: | 272-805 |
Cow position: | chr22:44933647-44934196 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 272-869 |
Cow position: | chr22:21589000-21589602 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 105 |
Conread position: | 272-869 |
Cow position: | chr22:39469850-39469245 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 299 |
Conread position: | 273-792 |
Cow position: | chr22:31313013-31313545 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 109 |
Conread position: | 273-823 |
Cow position: | chr22:44489563-44490123 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 357 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 56, 10 |
Conread position: | 279-805 |
Cow position: | chr22:327471-326953 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 343 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 36, 12 |
Conread position: | 280-805 |
Cow position: | chr22:118139-117625 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 343 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 49, 115 |
Conread position: | 282-804 |
Cow position: | chr22:10546331-10546861 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 43 |
Conread position: | 286-792 |
Cow position: | chr22:8136513-8135997 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 320 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 45, 204 |
Conread position: | 286-819 |
Cow position: | chr22:293480-292939 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 8 |
Conread position: | 288-805 |
Cow position: | chr22:46853036-46853559 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 337 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 37, 67 |
Conread position: | 294-642 |
Cow position: | chr22:13737759-13737420 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 248 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 8, 171 |
Conread position: | 294-805 |
Cow position: | chr22:27310086-27309556 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 200 |
Conread position: | 294-873 |
Cow position: | chr22:7277213-7277803 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 179 |
Conread position: | 295-795 |
Cow position: | chr22:6503977-6503470 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 330 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 7, 35 |
Conread position: | 295-805 |
Cow position: | chr22:39882481-39881959 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 70 |
Conread position: | 297-789 |
Cow position: | chr22:17329046-17328538 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 297-789 |
Cow position: | chr22:19144004-19143498 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 54 |
Conread position: | 297-805 |
Cow position: | chr22:693325-693843 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 194 |
Conread position: | 297-805 |
Cow position: | chr22:1319089-1319614 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 297-805 |
Cow position: | chr22:5672432-5672954 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 77 |
Conread position: | 297-819 |
Cow position: | chr22:31335339-31334807 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 180 |
Conread position: | 300-795 |
Cow position: | chr22:32485633-32485146 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 319 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 93, 29 |
Conread position: | 300-805 |
Cow position: | chr22:44369921-44369409 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 330 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 29, 155 |
Conread position: | 303-805 |
Cow position: | chr22:1878491-1879010 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 329 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 26, 155 |
Conread position: | 304-805 |
Cow position: | chr22:36736471-36736976 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 16 |
Conread position: | 307-805 |
Cow position: | chr22:11030664-11031177 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 328 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 6, 112 |
Conread position: | 309-795 |
Cow position: | chr22:5933272-5932790 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 323 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 310-816 |
Cow position: | chr22:11782821-11782304 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 17 |
Conread position: | 313-750 |
Cow position: | chr22:37131363-37131806 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 290 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 17, 61 |
Conread position: | 329-805 |
Cow position: | chr22:42990899-42991389 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 316 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 64, 123 |
Conread position: | 329-819 |
Cow position: | chr22:8149807-8149328 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 187 |
Conread position: | 329-819 |
Cow position: | chr22:18816654-18816154 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 13 |
Conread position: | 334-729 |
Cow position: | chr22:27386699-27386290 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 270 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 59, 118 |
Conread position: | 359-819 |
Cow position: | chr22:298567-298110 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 385-805 |
Cow position: | chr22:536889-537318 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 278 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 385-819 |
Cow position: | chr22:15314160-15313721 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 289 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 59, 14 |
Conread position: | 385-819 |
Cow position: | chr22:33350958-33351412 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 311 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 71, 21 |
Conread position: | 405-815 |
Cow position: | chr22:158095-157676 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 274 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 44, 184 |
Conread position: | 406-818 |
Cow position: | chr22:307416-307817 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 274 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 50, 138 |
Conread position: | 407-819 |
Cow position: | chr22:34606872-34607288 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 202 |
Conread position: | 413-795 |
Cow position: | chr22:13675344-13674965 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 245 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 19, 32 |
Conread position: | 413-805 |
Cow position: | chr22:13917318-13917720 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 265 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 61, 35 |
Conread position: | 428-805 |
Cow position: | chr22:36533907-36533526 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 262 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 23, 48 |
Conread position: | 473-795 |
Cow position: | chr22:46547787-46547457 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 214 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 477-819 |
Cow position: | chr22:36581285-36580954 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 71 |
Conread position: | 485-819 |
Cow position: | chr22:8874883-8875218 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 76 |
Conread position: | 498-749 |
Cow position: | chr22:45975879-45976130 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 23, 34 |
Conread position: | 508-795 |
Cow position: | chr22:10909920-10909626 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 193 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 86, 147 |
Conread position: | 508-805 |
Cow position: | chr22:6020580-6020879 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 205 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 83, 234 |
Conread position: | 521-792 |
Cow position: | chr22:44396382-44396654 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 70, 174 |
Conread position: | 529-795 |
Cow position: | chr22:41419755-41419487 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 185 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 62, 85 |
Conread position: | 529-883 |
Cow position: | chr22:309717-310069 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 221 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 540-819 |
Cow position: | chr22:9273389-9273665 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 193 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 51, 21 |
Conread position: | 541-819 |
Cow position: | chr22:41238126-41238403 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 55 |
Conread position: | 548-819 |
Cow position: | chr22:35943250-35942979 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 55 |
Conread position: | 574-819 |
Cow position: | chr22:21365423-21365165 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 190 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 582-805 |
Cow position: | chr22:525703-525476 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 153 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 603-759 |
Cow position: | chr22:44475258-44475415 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 113 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 619-805 |
Cow position: | chr22:18027310-18027496 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 126, 121 |
Conread position: | 812-956 |
Cow position: | chr22:36552783-36552634 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 812-1160 |
Cow position: | chr22:8875551-8875919 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 16, 102 |
Conread position: | 812-1164 |
Cow position: | chr22:36580846-36580481 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 132 |
Conread position: | 812-1164 |
Cow position: | chr22:36591483-36591124 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 101 |
Conread position: | 814-1152 |
Cow position: | chr22:292518-292176 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 197 |
Conread position: | 817-1163 |
Cow position: | chr22:297978-297625 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 247 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 101, 191 |
Conread position: | 949-1164 |
Cow position: | chr22:36552352-36552136 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 107, 56 |
Show alignments to all cow chromosomes.