Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 1-283 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 127 |
| Conread position: | 1-295 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 1-519 |
| Cow position: | |
| Alignm length: | 523 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 1-522 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 78 |
| Conread position: | 30-295 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 95 |
| Conread position: | 37-420 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 69-793 |
| Cow position: | |
| Alignm length: | 745 |
| Alignm identity: | 459 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 181-819 |
| Cow position: | |
| Alignm length: | 645 |
| Alignm identity: | 400 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 188-795 |
| Cow position: | |
| Alignm length: | 619 |
| Alignm identity: | 373 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 220-630 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-696 |
| Cow position: | |
| Alignm length: | 499 |
| Alignm identity: | 309 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 220-754 |
| Cow position: | |
| Alignm length: | 555 |
| Alignm identity: | 355 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-795 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 371 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 220-795 |
| Cow position: | |
| Alignm length: | 590 |
| Alignm identity: | 368 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 600 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 608 |
| Alignm identity: | 383 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-869 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 260-819 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 271-939 |
| Cow position: | |
| Alignm length: | 688 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 272-714 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 272-792 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 183 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 272-869 |
| Cow position: | |
| Alignm length: | 615 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 272-869 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 299 |
| Conread position: | 273-792 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 273-823 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 357 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 279-805 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 280-805 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 282-804 |
| Cow position: | |
| Alignm length: | 535 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 43 |
| Conread position: | 286-792 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 204 |
| Conread position: | 286-819 |
| Cow position: | |
| Alignm length: | 556 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 288-805 |
| Cow position: | |
| Alignm length: | 533 |
| Alignm identity: | 337 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 294-642 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 171 |
| Conread position: | 294-805 |
| Cow position: | |
| Alignm length: | 533 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 200 |
| Conread position: | 294-873 |
| Cow position: | |
| Alignm length: | 597 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 179 |
| Conread position: | 295-795 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 295-805 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 297-789 |
| Cow position: | |
| Alignm length: | 509 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 297-789 |
| Cow position: | |
| Alignm length: | 509 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 194 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 525 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 297-819 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 180 |
| Conread position: | 300-795 |
| Cow position: | |
| Alignm length: | 499 |
| Alignm identity: | 319 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 303-805 |
| Cow position: | |
| Alignm length: | 523 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 304-805 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 307-805 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 328 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 6, 112 |
| Conread position: | 309-795 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 310-816 |
| Cow position: | |
| Alignm length: | 530 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 313-750 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 64, 123 |
| Conread position: | 329-819 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 187 |
| Conread position: | 329-819 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 334-729 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 359-819 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 385-805 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 385-819 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 385-819 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 311 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 405-815 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 406-818 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 407-819 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 413-795 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 413-805 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 428-805 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 473-795 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 477-819 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 71 |
| Conread position: | 485-819 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 498-749 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 508-795 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 147 |
| Conread position: | 508-805 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 83, 234 |
| Conread position: | 521-792 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 70, 174 |
| Conread position: | 529-795 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 529-883 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 540-819 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 541-819 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 548-819 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 574-819 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 582-805 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 603-759 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 619-805 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 812-956 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 812-1160 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 812-1164 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 132 |
| Conread position: | 812-1164 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 814-1152 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 197 |
| Conread position: | 817-1163 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 191 |
| Conread position: | 949-1164 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 56 |
Show alignments to all cow chromosomes.