Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 41-303 |
| Cow position: | chr25:3379209-3378947 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 114-805 |
| Cow position: | chr25:18276274-18275569 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 444 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 187-785 |
| Cow position: | chr25:26278895-26279496 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 216-805 |
| Cow position: | chr25:14015825-14016424 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 220-805 |
| Cow position: | chr25:17589883-17589295 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 381 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 221-795 |
| Cow position: | chr25:19916750-19917333 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 384 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 264-883 |
| Cow position: | chr25:12759889-12759261 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 271-805 |
| Cow position: | chr25:8674624-8675175 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 271-805 |
| Cow position: | chr25:13780745-13781289 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 271-819 |
| Cow position: | chr25:3379015-3378479 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 272-792 |
| Cow position: | chr25:22147205-22147741 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 347 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 272-805 |
| Cow position: | chr25:18890305-18889756 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 363 |
| Conread position: | 282-697 |
| Cow position: | chr25:33991332-33990908 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 282-805 |
| Cow position: | chr25:34656722-34656187 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 344 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 285-819 |
| Cow position: | chr25:11933797-11933258 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 288-818 |
| Cow position: | chr25:20494090-20494621 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 294-778 |
| Cow position: | chr25:36240279-36240788 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 294-820 |
| Cow position: | chr25:18092752-18093284 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 398 |
| Conread position: | 297-756 |
| Cow position: | chr25:17615528-17615061 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 309-778 |
| Cow position: | chr25:17468943-17468464 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 309-819 |
| Cow position: | chr25:18060836-18060329 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 310-789 |
| Cow position: | chr25:18027880-18027382 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 310-805 |
| Cow position: | chr25:35362670-35362170 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 329-792 |
| Cow position: | chr25:34347221-34346771 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 329-796 |
| Cow position: | chr25:20629347-20629822 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 329-869 |
| Cow position: | chr25:25506420-25506969 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 366-680 |
| Cow position: | chr25:13454985-13454673 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 385-805 |
| Cow position: | chr25:32579798-32580224 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 406-819 |
| Cow position: | chr25:18255512-18255099 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 415-805 |
| Cow position: | chr25:12942841-12942441 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 484-805 |
| Cow position: | chr25:27022636-27022307 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 265 |
| Conread position: | 508-818 |
| Cow position: | chr25:18421629-18421942 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 169, 151 |
| Conread position: | 514-823 |
| Cow position: | chr25:23345373-23345059 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 548-795 |
| Cow position: | chr25:33665867-33665624 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 138, 41 |
| Conread position: | 562-819 |
| Cow position: | chr25:24218102-24217846 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 576-805 |
| Cow position: | chr25:9544094-9544320 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 577-819 |
| Cow position: | chr25:18303430-18303673 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 12, 195 |
| Conread position: | 813-1164 |
| Cow position: | chr25:3378352-3377998 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 14, 121 |
Show alignments to all cow chromosomes.