Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 3-519 |
| Cow position: | chr27:24560635-24561138 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 107-819 |
| Cow position: | chr27:6012946-6013659 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 126-672 |
| Cow position: | chr27:21288694-21288154 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 188-805 |
| Cow position: | chr27:25002926-25002319 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 72 |
| Conread position: | 220-805 |
| Cow position: | chr27:15540946-15541546 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | chr27:16034774-16034177 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 220-806 |
| Cow position: | chr27:2364369-2364969 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 272-756 |
| Cow position: | chr27:27662562-27663068 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 288-792 |
| Cow position: | chr27:1209036-1209555 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 415 |
| Conread position: | 297-799 |
| Cow position: | chr27:15278371-15277859 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 300-805 |
| Cow position: | chr27:16439027-16439545 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 309-805 |
| Cow position: | chr27:14460748-14460239 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 329-788 |
| Cow position: | chr27:5910595-5911063 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 329-805 |
| Cow position: | chr27:892940-893424 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 329-805 |
| Cow position: | chr27:9993473-9992986 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 329-819 |
| Cow position: | chr27:25805153-25804665 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 150 |
| Conread position: | 462-819 |
| Cow position: | chr27:22316450-22316814 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 226 |
| Conread position: | 473-795 |
| Cow position: | chr27:16432302-16432623 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 241 |
| Conread position: | 504-777 |
| Cow position: | chr27:26035141-26034865 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 521-805 |
| Cow position: | chr27:27051613-27051901 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 524-805 |
| Cow position: | chr27:15638422-15638140 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 5, 237 |
| Conread position: | 578-795 |
| Cow position: | chr27:26556016-26555797 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 615-819 |
| Cow position: | chr27:8561572-8561772 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 872-1155 |
| Cow position: | chr27:6013789-6014082 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 155, 69 |
Show alignments to all cow chromosomes.