Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 1-194 |
| Cow position: | chr3:37624088-37624279 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 123 |
| Conread position: | 1-609 |
| Cow position: | chr3:64820986-64821585 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 102 |
| Conread position: | 1-817 |
| Cow position: | chr3:32618556-32617764 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 2-607 |
| Cow position: | chr3:60387726-60388321 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 90 |
| Conread position: | 2-819 |
| Cow position: | chr3:18729792-18728981 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 89 |
| Conread position: | 41-819 |
| Cow position: | chr3:17936674-17935904 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 109-785 |
| Cow position: | chr3:64358702-64358045 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 435 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 166-792 |
| Cow position: | chr3:55230192-55229569 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 37 |
| Conread position: | 171-785 |
| Cow position: | chr3:36126889-36127516 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 389 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 181-727 |
| Cow position: | chr3:21945881-21945342 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 371 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 181-764 |
| Cow position: | chr3:6684980-6685566 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 382 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 181-822 |
| Cow position: | chr3:21183154-21182525 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 78 |
| Conread position: | 216-819 |
| Cow position: | chr3:15177859-15178473 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 220-705 |
| Cow position: | chr3:37968630-37969124 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 220-753 |
| Cow position: | chr3:46678367-46677821 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 360 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-754 |
| Cow position: | chr3:57856282-57856831 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 352 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 220-777 |
| Cow position: | chr3:32146539-32145974 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-778 |
| Cow position: | chr3:17829101-17828531 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-783 |
| Cow position: | chr3:10239198-10239772 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 367 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 220-792 |
| Cow position: | chr3:31354707-31354133 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 220-804 |
| Cow position: | chr3:2917015-2917605 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 220-805 |
| Cow position: | chr3:207614-207016 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 220-805 |
| Cow position: | chr3:6781936-6782529 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 383 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | chr3:22335443-22336033 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 382 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 220-805 |
| Cow position: | chr3:41212192-41211592 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | chr3:46861753-46861158 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | chr3:49614427-49613832 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 220-805 |
| Cow position: | chr3:64028537-64027941 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 220-805 |
| Cow position: | chr3:64650178-64650771 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 220-819 |
| Cow position: | chr3:3522560-3523180 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 409 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 220-832 |
| Cow position: | chr3:5883086-5883711 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 250-803 |
| Cow position: | chr3:42630591-42631156 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 263-818 |
| Cow position: | chr3:5830041-5829471 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 483 |
| Conread position: | 269-783 |
| Cow position: | chr3:2653706-2654230 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 271-804 |
| Cow position: | chr3:47082063-47081514 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 359 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 271-805 |
| Cow position: | chr3:15989440-15988882 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 352 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 220 |
| Conread position: | 272-783 |
| Cow position: | chr3:43040096-43039582 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 272-792 |
| Cow position: | chr3:40822984-40823519 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 183 |
| Conread position: | 272-804 |
| Cow position: | chr3:36882316-36881778 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 272-805 |
| Cow position: | chr3:18811099-18811648 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 358 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 272-805 |
| Cow position: | chr3:30314156-30314711 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 272-805 |
| Cow position: | chr3:78027815-78027265 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 503 |
| Conread position: | 280-772 |
| Cow position: | chr3:9716416-9716926 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 327 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 280-793 |
| Cow position: | chr3:50128268-50127745 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 333 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 280-819 |
| Cow position: | chr3:58947062-58947617 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 282-805 |
| Cow position: | chr3:24314087-24314614 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 349 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 43 |
| Conread position: | 282-805 |
| Cow position: | chr3:47179595-47179058 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 342 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 100, 93 |
| Conread position: | 288-805 |
| Cow position: | chr3:23291793-23291258 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 289-819 |
| Cow position: | chr3:34396443-34395923 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 341 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 290-819 |
| Cow position: | chr3:19722987-19722464 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 171 |
| Conread position: | 291-819 |
| Cow position: | chr3:56340803-56340268 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 294-663 |
| Cow position: | chr3:63005530-63005144 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 294-805 |
| Cow position: | chr3:19878281-19878803 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 347 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 294-805 |
| Cow position: | chr3:45032360-45032886 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 197 |
| Conread position: | 297-586 |
| Cow position: | chr3:52184612-52184311 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 275 |
| Conread position: | 297-792 |
| Cow position: | chr3:2711336-2710830 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 128 |
| Conread position: | 297-792 |
| Cow position: | chr3:19757338-19756827 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 192 |
| Conread position: | 297-792 |
| Cow position: | chr3:64017742-64017232 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 297-795 |
| Cow position: | chr3:70084021-70083516 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 336 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 297-803 |
| Cow position: | chr3:19943691-19944193 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 329 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 297-805 |
| Cow position: | chr3:3054234-3054741 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 297-805 |
| Cow position: | chr3:34031275-34030754 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 331 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 31, 189 |
| Conread position: | 299-805 |
| Cow position: | chr3:472162-472677 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 300-804 |
| Cow position: | chr3:31898348-31897833 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 197 |
| Conread position: | 300-819 |
| Cow position: | chr3:45869573-45869059 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 331 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 144, 20 |
| Conread position: | 300-819 |
| Cow position: | chr3:66891336-66890804 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 303-815 |
| Cow position: | chr3:50914934-50915461 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 334 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 80, 276 |
| Conread position: | 303-819 |
| Cow position: | chr3:4026905-4027431 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 90 |
| Conread position: | 303-819 |
| Cow position: | chr3:48061197-48060673 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 303-870 |
| Cow position: | chr3:53410548-53411119 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 377 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 306-739 |
| Cow position: | chr3:3805992-3806418 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 79 |
| Conread position: | 306-803 |
| Cow position: | chr3:75041528-75041025 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 309-680 |
| Cow position: | chr3:80871543-80871914 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 309-778 |
| Cow position: | chr3:42580329-42579849 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 309-805 |
| Cow position: | chr3:66119290-66119800 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 309-805 |
| Cow position: | chr3:77474398-77474907 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 309-807 |
| Cow position: | chr3:5047548-5047037 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 310-1128 |
| Cow position: | chr3:4285520-4286355 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 313-626 |
| Cow position: | chr3:3932394-3932698 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 329-659 |
| Cow position: | chr3:4739260-4738944 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 192, 46 |
| Conread position: | 329-783 |
| Cow position: | chr3:2633584-2634048 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 128 |
| Conread position: | 329-791 |
| Cow position: | chr3:69933053-69933525 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 123 |
| Conread position: | 329-792 |
| Cow position: | chr3:18542752-18542276 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 329-804 |
| Cow position: | chr3:18357223-18356743 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 329-805 |
| Cow position: | chr3:72629727-72630215 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 329-820 |
| Cow position: | chr3:594245-594736 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 322 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 330-805 |
| Cow position: | chr3:66638396-66638885 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 452 |
| Conread position: | 335-799 |
| Cow position: | chr3:60210514-60210039 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 220 |
| Conread position: | 338-752 |
| Cow position: | chr3:16072827-16073228 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 338-792 |
| Cow position: | chr3:5954522-5954054 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 344-756 |
| Cow position: | chr3:49333072-49333487 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 345-769 |
| Cow position: | chr3:38866076-38866504 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 346-755 |
| Cow position: | chr3:42445394-42444989 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 369-883 |
| Cow position: | chr3:14754600-14754074 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 382-754 |
| Cow position: | chr3:54864985-54864605 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 382-776 |
| Cow position: | chr3:17775812-17776201 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 382-819 |
| Cow position: | chr3:54783255-54783702 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 384-680 |
| Cow position: | chr3:13274223-13273917 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 385-792 |
| Cow position: | chr3:5995978-5995565 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 385-805 |
| Cow position: | chr3:7159012-7158588 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 385-805 |
| Cow position: | chr3:7168513-7168938 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 385-819 |
| Cow position: | chr3:42431954-42432390 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 387-795 |
| Cow position: | chr3:29594920-29595329 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 387-819 |
| Cow position: | chr3:26949231-26949671 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 158 |
| Conread position: | 387-879 |
| Cow position: | chr3:21305449-21304967 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 390-805 |
| Cow position: | chr3:48231271-48230860 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 391-838 |
| Cow position: | chr3:53515342-53515791 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 393-772 |
| Cow position: | chr3:57501047-57500674 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 6 |
| Conread position: | 405-805 |
| Cow position: | chr3:56321053-56321460 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 413-781 |
| Cow position: | chr3:16867036-16866652 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 427-792 |
| Cow position: | chr3:66619936-66620304 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 430-795 |
| Cow position: | chr3:29327218-29326845 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 138 |
| Conread position: | 476-718 |
| Cow position: | chr3:19802468-19802717 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 147 |
| Conread position: | 480-805 |
| Cow position: | chr3:26822681-26822364 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 484-737 |
| Cow position: | chr3:49276302-49276044 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 489-819 |
| Cow position: | chr3:20871555-20871227 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 508-820 |
| Cow position: | chr3:23214215-23213902 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 83, 130 |
| Conread position: | 521-805 |
| Cow position: | chr3:14439901-14439616 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 521-818 |
| Cow position: | chr3:54785625-54785914 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 521-825 |
| Cow position: | chr3:83234265-83233966 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 158, 70 |
| Conread position: | 521-881 |
| Cow position: | chr3:49137681-49137324 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 302 |
| Conread position: | 528-806 |
| Cow position: | chr3:52864607-52864320 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 534-805 |
| Cow position: | chr3:39326595-39326862 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 541-805 |
| Cow position: | chr3:45895681-45895413 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 541-805 |
| Cow position: | chr3:45974374-45974642 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 548-805 |
| Cow position: | chr3:49545321-49545062 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 551-805 |
| Cow position: | chr3:40157616-40157361 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 556-819 |
| Cow position: | chr3:19891086-19890829 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 567-795 |
| Cow position: | chr3:68700064-68699838 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 567-882 |
| Cow position: | chr3:49162602-49162919 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 193 |
| Conread position: | 582-820 |
| Cow position: | chr3:77423601-77423834 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 595-819 |
| Cow position: | chr3:12680475-12680268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 601-805 |
| Cow position: | chr3:36864419-36864214 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 141 |
| Conread position: | 613-805 |
| Cow position: | chr3:68873802-68873610 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 129 |
| Conread position: | 615-805 |
| Cow position: | chr3:19938839-19939029 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 631-812 |
| Cow position: | chr3:66363588-66363769 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 655-819 |
| Cow position: | chr3:49601942-49601788 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 782-1164 |
| Cow position: | chr3:64821821-64822220 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 842-1164 |
| Cow position: | chr3:31415440-31415768 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 169 |
| Conread position: | 866-1163 |
| Cow position: | chr3:18728829-18728527 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 91, 65 |
Show alignments to all cow chromosomes.