Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 113, 124

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 90

Conread position: 1-819
Cow position:
Alignm length: 832
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 125

Conread position: 3-283
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 43

Conread position: 7-280
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 41-278
Cow position:
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 64-812
Cow position:
Alignm length: 788
Alignm identity: 455
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 213

Conread position: 174-784
Cow position:
Alignm length: 632
Alignm identity: 398
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 14

Conread position: 181-783
Cow position:
Alignm length: 617
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 78

Conread position: 181-796
Cow position:
Alignm length: 637
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 78

Conread position: 181-819
Cow position:
Alignm length: 648
Alignm identity: 396
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 212, 84

Conread position: 181-819
Cow position:
Alignm length: 647
Alignm identity: 401
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 207, 109

Conread position: 184-736
Cow position:
Alignm length: 577
Alignm identity: 360
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 47

Conread position: 185-810
Cow position:
Alignm length: 638
Alignm identity: 416
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 173, 81

Conread position: 198-792
Cow position:
Alignm length: 610
Alignm identity: 378
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 5

Conread position: 198-795
Cow position:
Alignm length: 617
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 5

Conread position: 208-819
Cow position:
Alignm length: 624
Alignm identity: 390
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 124, 57

Conread position: 212-715
Cow position:
Alignm length: 515
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 74

Conread position: 216-819
Cow position:
Alignm length: 621
Alignm identity: 401
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 162

Conread position: 220-680
Cow position:
Alignm length: 478
Alignm identity: 300
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 73, 35

Conread position: 220-776
Cow position:
Alignm length: 575
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 220-789
Cow position:
Alignm length: 588
Alignm identity: 369
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 41, 73

Conread position: 220-789
Cow position:
Alignm length: 586
Alignm identity: 368
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 108, 53

Conread position: 220-805
Cow position:
Alignm length: 598
Alignm identity: 372
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 41

Conread position: 220-805
Cow position:
Alignm length: 606
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 220-805
Cow position:
Alignm length: 606
Alignm identity: 383
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 53

Conread position: 220-805
Cow position:
Alignm length: 604
Alignm identity: 376
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 57

Conread position: 220-805
Cow position:
Alignm length: 603
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position:
Alignm length: 606
Alignm identity: 377
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 41

Conread position: 220-805
Cow position:
Alignm length: 605
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 41

Conread position: 220-819
Cow position:
Alignm length: 615
Alignm identity: 384
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 70, 17

Conread position: 220-823
Cow position:
Alignm length: 620
Alignm identity: 384
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 38

Conread position: 235-746
Cow position:
Alignm length: 521
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 31

Conread position: 237-805
Cow position:
Alignm length: 611
Alignm identity: 396
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 36, 13

Conread position: 270-805
Cow position:
Alignm length: 555
Alignm identity: 345
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 134

Conread position: 271-805
Cow position:
Alignm length: 554
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 220

Conread position: 271-846
Cow position:
Alignm length: 591
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 128

Conread position: 272-761
Cow position:
Alignm length: 504
Alignm identity: 288
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 272-792
Cow position:
Alignm length: 536
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 272-792
Cow position:
Alignm length: 537
Alignm identity: 342
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 127

Conread position: 272-792
Cow position:
Alignm length: 530
Alignm identity: 326
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 80

Conread position: 272-805
Cow position:
Alignm length: 570
Alignm identity: 373
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 154

Conread position: 272-805
Cow position:
Alignm length: 550
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 105

Conread position: 272-819
Cow position:
Alignm length: 566
Alignm identity: 356
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 24, 114

Conread position: 279-819
Cow position:
Alignm length: 550
Alignm identity: 338
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 118

Conread position: 280-805
Cow position:
Alignm length: 542
Alignm identity: 350
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 216

Conread position: 282-680
Cow position:
Alignm length: 407
Alignm identity: 265
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 17

Conread position: 282-803
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 282-804
Cow position:
Alignm length: 532
Alignm identity: 339
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 9

Conread position: 282-819
Cow position:
Alignm length: 550
Alignm identity: 347
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 9

Conread position: 287-795
Cow position:
Alignm length: 518
Alignm identity: 325
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 69

Conread position: 287-805
Cow position:
Alignm length: 537
Alignm identity: 345
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 11

Conread position: 291-819
Cow position:
Alignm length: 546
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 192

Conread position: 291-823
Cow position:
Alignm length: 553
Alignm identity: 354
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 6

Conread position: 294-754
Cow position:
Alignm length: 470
Alignm identity: 304
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 254

Conread position: 294-789
Cow position:
Alignm length: 501
Alignm identity: 315
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 144, 35

Conread position: 297-682
Cow position:
Alignm length: 401
Alignm identity: 260
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 297-804
Cow position:
Alignm length: 520
Alignm identity: 324
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 95

Conread position: 297-805
Cow position:
Alignm length: 528
Alignm identity: 331
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 199

Conread position: 299-622
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 96

Conread position: 300-754
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 25

Conread position: 300-781
Cow position:
Alignm length: 502
Alignm identity: 316
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 25

Conread position: 300-805
Cow position:
Alignm length: 518
Alignm identity: 335
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 97

Conread position: 306-819
Cow position:
Alignm length: 531
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 306-819
Cow position:
Alignm length: 526
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 13

Conread position: 306-901
Cow position:
Alignm length: 620
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 307-732
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 57

Conread position: 309-804
Cow position:
Alignm length: 515
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 182

Conread position: 310-805
Cow position:
Alignm length: 513
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 88

Conread position: 312-805
Cow position:
Alignm length: 514
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 8

Conread position: 314-617
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 15, 63

Conread position: 315-802
Cow position:
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 323-819
Cow position:
Alignm length: 507
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 287

Conread position: 328-805
Cow position:
Alignm length: 483
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 7

Conread position: 329-792
Cow position:
Alignm length: 479
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 386

Conread position: 329-792
Cow position:
Alignm length: 480
Alignm identity: 310
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 64, 403

Conread position: 329-819
Cow position:
Alignm length: 505
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 235

Conread position: 329-910
Cow position:
Alignm length: 602
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 80

Conread position: 335-675
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 111, 64

Conread position: 335-805
Cow position:
Alignm length: 485
Alignm identity: 316
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 19

Conread position: 374-792
Cow position:
Alignm length: 435
Alignm identity: 284
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 116

Conread position: 382-591
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 382-789
Cow position:
Alignm length: 418
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 382-805
Cow position:
Alignm length: 432
Alignm identity: 283
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 67

Conread position: 382-818
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 138

Conread position: 384-819
Cow position:
Alignm length: 446
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 15

Conread position: 385-643
Cow position:
Alignm length: 265
Alignm identity: 173
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 14

Conread position: 385-805
Cow position:
Alignm length: 432
Alignm identity: 284
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 60, 19

Conread position: 385-819
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 13, 69

Conread position: 385-871
Cow position:
Alignm length: 505
Alignm identity: 320
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 28

Conread position: 390-819
Cow position:
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 392-819
Cow position:
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 413-805
Cow position:
Alignm length: 399
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 413-819
Cow position:
Alignm length: 418
Alignm identity: 274
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 72

Conread position: 417-778
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 67

Conread position: 427-727
Cow position:
Alignm length: 311
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 63

Conread position: 450-805
Cow position:
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 5

Conread position: 472-819
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 486-819
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 486-819
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 26

Conread position: 515-822
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 167, 14

Conread position: 521-755
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 230

Conread position: 521-819
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 161, 0

Conread position: 524-742
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 80

Conread position: 530-820
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 18

Conread position: 538-733
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 126

Conread position: 567-781
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 175

Conread position: 567-795
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 176

Conread position: 582-795
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 23

Conread position: 584-795
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 6

Conread position: 593-795
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 102

Conread position: 599-805
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 143

Conread position: 610-805
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 136

Conread position: 620-819
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 26

Conread position: 624-883
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 9

Conread position: 655-792
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 679-819
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 706-819
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 812-1145
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 16, 46

Conread position: 837-1164
Cow position:
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 171

Conread position: 842-1161
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 292, 43

Conread position: 861-1164
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 33

Conread position: 872-1152
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 75, 14

Conread position: 885-1153
Cow position:
Alignm length: 272
Alignm identity: 180
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 12

Show alignments to all cow chromosomes.