Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1B120045.5 |
| Conread position: | 1-559 |
| Cow position: | |
| Alignm length: | 580 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 1-819 |
| Cow position: | |
| Alignm length: | 839 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 2-205 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 2-819 |
| Cow position: | |
| Alignm length: | 850 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 246 |
| Conread position: | 6-283 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 165, 63 |
| Conread position: | 89-283 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 143-515 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 163-805 |
| Cow position: | |
| Alignm length: | 660 |
| Alignm identity: | 413 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 179-795 |
| Cow position: | |
| Alignm length: | 640 |
| Alignm identity: | 405 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 285, 108 |
| Conread position: | 181-792 |
| Cow position: | |
| Alignm length: | 622 |
| Alignm identity: | 377 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 266, 102 |
| Conread position: | 181-819 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 29 |
| Conread position: | 181-871 |
| Cow position: | |
| Alignm length: | 711 |
| Alignm identity: | 446 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 212, 56 |
| Conread position: | 216-742 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 220-736 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 337 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 220-799 |
| Cow position: | |
| Alignm length: | 598 |
| Alignm identity: | 379 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 220-804 |
| Cow position: | |
| Alignm length: | 598 |
| Alignm identity: | 376 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-804 |
| Cow position: | |
| Alignm length: | 603 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 599 |
| Alignm identity: | 377 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 605 |
| Alignm identity: | 379 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 608 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 389 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 383 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 607 |
| Alignm identity: | 383 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 605 |
| Alignm identity: | 379 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 220-805 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 220-819 |
| Cow position: | |
| Alignm length: | 631 |
| Alignm identity: | 400 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 179, 51 |
| Conread position: | 220-819 |
| Cow position: | |
| Alignm length: | 621 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 220-1130 |
| Cow position: | |
| Alignm length: | 932 |
| Alignm identity: | 372 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 221-805 |
| Cow position: | |
| Alignm length: | 604 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 221-805 |
| Cow position: | |
| Alignm length: | 604 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 221-805 |
| Cow position: | |
| Alignm length: | 604 |
| Alignm identity: | 373 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 272-755 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 272-789 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 272-792 |
| Cow position: | |
| Alignm length: | 534 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 183 |
| Conread position: | 272-804 |
| Cow position: | |
| Alignm length: | 543 |
| Alignm identity: | 343 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 24, 226 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 330 |
| Conread position: | 272-805 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 272-820 |
| Cow position: | |
| Alignm length: | 566 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 515 |
| Conread position: | 273-805 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 273-819 |
| Cow position: | |
| Alignm length: | 569 |
| Alignm identity: | 369 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 273-819 |
| Cow position: | |
| Alignm length: | 561 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 282-819 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 359 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 111, 179 |
| Conread position: | 286-792 |
| Cow position: | |
| Alignm length: | 529 |
| Alignm identity: | 333 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 288-805 |
| Cow position: | |
| Alignm length: | 531 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 291-510 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 291-789 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 316 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 291-819 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 105 |
| Conread position: | 294-805 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 346 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 34, 196 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 267 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 525 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 125 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 297-805 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 224 |
| Conread position: | 297-841 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 356 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 536 |
| Conread position: | 297-869 |
| Cow position: | |
| Alignm length: | 592 |
| Alignm identity: | 371 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 31, 278 |
| Conread position: | 300-803 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 300-805 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 303-641 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 124 |
| Conread position: | 303-772 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 317 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 25, 53 |
| Conread position: | 303-778 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 273 |
| Conread position: | 306-805 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 309-819 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 338 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 78, 148 |
| Conread position: | 309-819 |
| Cow position: | |
| Alignm length: | 531 |
| Alignm identity: | 342 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 310-819 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 330 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 312-475 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 326-644 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 329-662 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 329-668 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 329-720 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 329-770 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 329-792 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 329-805 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 386 |
| Conread position: | 331-695 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 337-819 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 38 |
| Conread position: | 360-805 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 370-805 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 200 |
| Conread position: | 373-873 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 382-806 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 385-805 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 385-819 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 68, 191 |
| Conread position: | 386-805 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 175 |
| Conread position: | 405-803 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 272 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 405-805 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 405-805 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 407-811 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 276 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 407-820 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 437-819 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 454-820 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 455-804 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 276 |
| Conread position: | 494-803 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 499-805 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 521-819 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 221 |
| Conread position: | 527-803 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 533-792 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 536-805 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 55, 231 |
| Conread position: | 548-819 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 560-815 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 571-772 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 585-805 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 103, 157 |
| Conread position: | 594-805 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 152 |
| Conread position: | 596-823 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 133 |
| Conread position: | 599-805 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 787-1149 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 788-1164 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 227 |
| Conread position: | 811-1160 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 824-1164 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 833-1142 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 105, 134 |
| Conread position: | 965-1129 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 41 |
Show alignments to all cow chromosomes.