Cow genome map

Conread name: Ss1.1-Liv1-LVRM1B120045.5

Conread position: 1-194
Cow position: chrX:41890142-41889953 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 76, 37

Conread position: 1-214
Cow position: chrX:6251404-6251195 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 108, 124

Conread position: 39-819
Cow position: chrX:17632564-17631794 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 50-819
Cow position: chrX:19927587-19928326 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 76

Conread position: 52-781
Cow position: chrX:29812990-29813702 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 74

Conread position: 63-283
Cow position: chrX:27409190-27409399 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 63

Conread position: 89-795
Cow position: chrX:6873766-6873060 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 455
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 5, 171

Conread position: 142-805
Cow position: chrX:17668918-17668281 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 23

Conread position: 174-792
Cow position: chrX:30184513-30183886 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 71

Conread position: 177-819
Cow position: chrX:2142680-2143315 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 430
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 31

Conread position: 179-819
Cow position: chrX:24485012-24484378 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 26

Conread position: 181-815
Cow position: chrX:24114760-24114156 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 13

Conread position: 184-805
Cow position: chrX:26504573-26505205 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 186

Conread position: 198-819
Cow position: chrX:27990356-27989746 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 389
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 221, 57

Conread position: 220-756
Cow position: chrX:21339824-21340372 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 342
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 41

Conread position: 220-777
Cow position: chrX:26401045-26400474 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 220-789
Cow position: chrX:21489656-21490234 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 364
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 65

Conread position: 220-795
Cow position: chrX:5395541-5394951 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 220-805
Cow position: chrX:2603470-2604069 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 220-805
Cow position: chrX:7029611-7030209 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 380
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chrX:12655325-12654739 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 385
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 108, 35

Conread position: 220-805
Cow position: chrX:13077268-13076676 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 220-805
Cow position: chrX:13097842-13097250 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 220-805
Cow position: chrX:13398692-13398099 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 369
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 35

Conread position: 220-805
Cow position: chrX:15180010-15179410 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 220-805
Cow position: chrX:17479101-17478501 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 385
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 35

Conread position: 220-805
Cow position: chrX:24088824-24089423 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 376
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 41

Conread position: 220-805
Cow position: chrX:27426895-27426299 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 384
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 28

Conread position: 220-805
Cow position: chrX:31187813-31187224 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 377
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 65

Conread position: 220-805
Cow position: chrX:37848434-37849035 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 381
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 36

Conread position: 220-805
Cow position: chrX:39521328-39521928 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 220-818
Cow position: chrX:31192338-31191776 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 377
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 69, 35

Conread position: 220-819
Cow position: chrX:16363701-16363089 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 220-819
Cow position: chrX:22777737-22778347 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 41

Conread position: 220-819
Cow position: chrX:24122496-24121885 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 220-820
Cow position: chrX:12280834-12280234 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 383
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 35

Conread position: 221-819
Cow position: chrX:22619891-22619273 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 384
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 64

Conread position: 259-795
Cow position: chrX:12804404-12803853 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 155

Conread position: 263-805
Cow position: chrX:13007174-13006604 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 264-805
Cow position: chrX:1833294-1833849 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 265-756
Cow position: chrX:12289478-12288964 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 334
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 93

Conread position: 265-792
Cow position: chrX:28759163-28758633 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 339
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 196

Conread position: 271-804
Cow position: chrX:2860329-2859781 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 351
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 129

Conread position: 271-805
Cow position: chrX:7751369-7751921 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 351
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 25, 492

Conread position: 271-819
Cow position: chrX:16698772-16699335 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 218

Conread position: 272-792
Cow position: chrX:18955043-18954517 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 115

Conread position: 272-792
Cow position: chrX:21222399-21222936 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 272-805
Cow position: chrX:2483168-2482617 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 352
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 61

Conread position: 272-805
Cow position: chrX:15127771-15127221 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 415

Conread position: 272-805
Cow position: chrX:21602360-21602900 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 326

Conread position: 272-805
Cow position: chrX:32466726-32467273 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 103

Conread position: 272-819
Cow position: chrX:22487660-22488216 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 272-881
Cow position: chrX:23392130-23391508 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 568

Conread position: 273-727
Cow position: chrX:8479182-8479644 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 303
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 10

Conread position: 273-805
Cow position: chrX:10532082-10531537 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 273-815
Cow position: chrX:23046622-23047178 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 352
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 10

Conread position: 273-819
Cow position: chrX:5862874-5863433 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 357
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 56, 10

Conread position: 273-857
Cow position: chrX:8586571-8587164 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 274-805
Cow position: chrX:26767719-26767177 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 350
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 22, 133

Conread position: 279-795
Cow position: chrX:24275151-24275681 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 284

Conread position: 280-713
Cow position: chrX:6909854-6909404 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 285
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 328

Conread position: 282-804
Cow position: chrX:11465513-11464982 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 21

Conread position: 282-819
Cow position: chrX:21290000-21289456 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 282-820
Cow position: chrX:7481091-7481639 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 359
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 48, 43

Conread position: 282-836
Cow position: chrX:3085418-3084848 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 334
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 21

Conread position: 283-805
Cow position: chrX:21829012-21829545 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 344
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 8

Conread position: 283-820
Cow position: chrX:20796096-20796649 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 37

Conread position: 287-697
Cow position: chrX:22131205-22130794 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 7

Conread position: 287-792
Cow position: chrX:15598416-15598938 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 289-805
Cow position: chrX:8670084-8670613 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 341
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 18, 110

Conread position: 291-803
Cow position: chrX:28634918-28634397 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 291-805
Cow position: chrX:35017312-35017830 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 294-805
Cow position: chrX:8454250-8454773 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 164

Conread position: 294-805
Cow position: chrX:9007838-9008359 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 333
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 31

Conread position: 294-805
Cow position: chrX:9193150-9192623 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 197

Conread position: 295-805
Cow position: chrX:22813886-22814403 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 331
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 5

Conread position: 297-754
Cow position: chrX:11668938-11668472 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 106

Conread position: 297-792
Cow position: chrX:13413618-13413108 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 297-792
Cow position: chrX:30232606-30232100 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 297-805
Cow position: chrX:20803637-20804148 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 297-805
Cow position: chrX:29854066-29853545 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 333
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 31, 307

Conread position: 300-795
Cow position: chrX:18218897-18219408 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 329
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 64

Conread position: 300-804
Cow position: chrX:24136892-24136385 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 30

Conread position: 300-805
Cow position: chrX:2101362-2101880 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 335
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 29, 98

Conread position: 300-807
Cow position: chrX:2787710-2787207 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 337
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 6

Conread position: 300-819
Cow position: chrX:20698775-20698264 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 332
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 164

Conread position: 303-795
Cow position: chrX:16275185-16275688 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 326
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 22

Conread position: 306-820
Cow position: chrX:5324208-5323687 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 309-778
Cow position: chrX:29873046-29872563 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 305
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 66

Conread position: 309-819
Cow position: chrX:27494216-27494745 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 338
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 310-805
Cow position: chrX:14787362-14786851 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 329
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 67

Conread position: 312-761
Cow position: chrX:2380301-2380747 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 312-797
Cow position: chrX:26428513-26428027 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 313-819
Cow position: chrX:5284215-5283700 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 16

Conread position: 327-589
Cow position: chrX:41889370-41889104 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 329-644
Cow position: chrX:6276059-6275734 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 206
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 64

Conread position: 329-777
Cow position: chrX:30710885-30711348 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 309
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 64, 157

Conread position: 329-805
Cow position: chrX:1546466-1546956 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 329-805
Cow position: chrX:23456039-23455557 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 131

Conread position: 329-805
Cow position: chrX:26759059-26758584 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 308
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 123

Conread position: 330-819
Cow position: chrX:28875871-28875388 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 122

Conread position: 334-568
Cow position: chrX:13418477-13418240 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 15

Conread position: 335-792
Cow position: chrX:26527513-26527984 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 307
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 47

Conread position: 336-787
Cow position: chrX:15309710-15309252 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 288
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 113

Conread position: 343-805
Cow position: chrX:40057521-40057044 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 140

Conread position: 344-805
Cow position: chrX:2537217-2536760 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 291
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 13

Conread position: 361-795
Cow position: chrX:21633018-21632576 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 370-805
Cow position: chrX:29285010-29285438 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 284
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 62, 209

Conread position: 374-805
Cow position: chrX:35529436-35529883 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 295
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 115

Conread position: 375-739
Cow position: chrX:19185371-19185013 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 81, 15

Conread position: 382-819
Cow position: chrX:23041520-23041088 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 20

Conread position: 385-751
Cow position: chrX:24481894-24481525 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 177

Conread position: 385-805
Cow position: chrX:2563265-2562836 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 14

Conread position: 385-805
Cow position: chrX:9124951-9125380 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 280
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 14

Conread position: 386-633
Cow position: chrX:10418579-10418329 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 26, 101

Conread position: 390-735
Cow position: chrX:16236912-16237260 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 9

Conread position: 394-819
Cow position: chrX:16967439-16967014 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 269
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 42, 51

Conread position: 405-805
Cow position: chrX:18660170-18659762 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 19

Conread position: 406-739
Cow position: chrX:15252342-15252015 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 158

Conread position: 406-883
Cow position: chrX:30369388-30368918 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 306
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 136

Conread position: 424-805
Cow position: chrX:41411391-41411000 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 61

Conread position: 432-805
Cow position: chrX:29947342-29947728 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 322

Conread position: 444-819
Cow position: chrX:12670208-12669829 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 26

Conread position: 449-805
Cow position: chrX:22583047-22582678 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 464-784
Cow position: chrX:6886173-6885866 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 213, 7

Conread position: 473-819
Cow position: chrX:28603774-28603423 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 49

Conread position: 477-819
Cow position: chrX:29882545-29882195 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 223
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 138

Conread position: 508-783
Cow position: chrX:29794391-29794115 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 55

Conread position: 508-795
Cow position: chrX:44386194-44386487 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 508-805
Cow position: chrX:982360-982659 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 83, 235

Conread position: 508-805
Cow position: chrX:1943321-1943023 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 52

Conread position: 508-805
Cow position: chrX:28584702-28585001 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 234

Conread position: 508-805
Cow position: chrX:37811884-37812183 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 235

Conread position: 508-819
Cow position: chrX:3398119-3397812 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 53

Conread position: 514-819
Cow position: chrX:35390365-35390062 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 100

Conread position: 521-718
Cow position: chrX:21586902-21587099 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 156, 42

Conread position: 521-754
Cow position: chrX:5336733-5336499 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 227

Conread position: 521-776
Cow position: chrX:16461412-16461669 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 521-805
Cow position: chrX:26628297-26628011 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 248

Conread position: 525-819
Cow position: chrX:12973491-12973196 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 259

Conread position: 529-792
Cow position: chrX:38146048-38146313 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 539-805
Cow position: chrX:5834211-5833943 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 541-818
Cow position: chrX:30133080-30132800 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 548-822
Cow position: chrX:29998557-29998825 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 14

Conread position: 552-815
Cow position: chrX:29757926-29758192 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 97

Conread position: 556-783
Cow position: chrX:16223122-16222904 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 124

Conread position: 568-819
Cow position: chrX:29783233-29782988 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 88, 25

Conread position: 574-795
Cow position: chrX:38576035-38575808 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 73

Conread position: 574-805
Cow position: chrX:11663717-11663484 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 169

Conread position: 574-805
Cow position: chrX:21304738-21304505 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 169

Conread position: 578-782
Cow position: chrX:17250540-17250333 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 166

Conread position: 581-795
Cow position: chrX:31724821-31725037 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 590-819
Cow position: chrX:10418146-10417922 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 44

Conread position: 594-805
Cow position: chrX:39719246-39719458 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 175

Conread position: 595-819
Cow position: chrX:24139216-24138993 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 82, 154

Conread position: 610-805
Cow position: chrX:30044320-30044124 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 704-819
Cow position: chrX:13417891-13417776 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 825-1164
Cow position: chrX:10417540-10417199 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 109

Conread position: 854-1164
Cow position: chrX:29814634-29814975 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 169

Conread position: 859-1126
Cow position: chrX:13417607-13417346 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 220, 61

Conread position: 908-1164
Cow position: chrX:41889111-41888835 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 108

Conread position: 946-1142
Cow position: chrX:6250543-6250349 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 111, 58

Show alignments to all cow chromosomes.