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Cow genome map

           
Conread name:
           
Ss1.1-Liv1-LVRM1E090171.5
        

               
Conread position:
               
86-667
               

               
Cow position:
               
chr27:23632301-23632904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
96-682
               

               
Cow position:
               
chr27:19387737-19388340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
99-525
               

               
Cow position:
               
chr27:11480922-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 83
               

               
Conread position:
               
104-682
               

               
Cow position:
               
chr27:13875454-13876050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
109-670
               

               
Cow position:
               
chr27:1768897-1768328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
111-565
               

               
Cow position:
               
chr27:30914732-30915201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
112-564
               

               
Cow position:
               
chr27:20354330-20354778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
112-595
               

               
Cow position:
               
chr27:22220280-22220787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
112-682
               

               
Cow position:
               
chr27:17397724-17397132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
113-682
               

               
Cow position:
               
chr27:1353309-1353918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
115-680
               

               
Cow position:
               
chr27:11435596-11435010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
116-644
               

               
Cow position:
               
chr27:7971294-7971855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
117-632
               

               
Cow position:
               
chr27:12515932-12516471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
117-682
               

               
Cow position:
               
chr27:15315259-15315812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
120-547
               

               
Cow position:
               
chr27:22547650-22547223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
120-680
               

               
Cow position:
               
chr27:15453951-15454534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
121-617
               

               
Cow position:
               
chr27:28922157-28921641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
121-670
               

               
Cow position:
               
chr27:22035632-22035066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
122-646
               

               
Cow position:
               
chr27:28932061-28931502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
124-468
               

               
Cow position:
               
chr27:22386629-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 64
               

               
Conread position:
               
124-502
               

               
Cow position:
               
chr27:426708-427109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
124-578
               

               
Cow position:
               
chr27:20553501-20553933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
124-682
               

               
Cow position:
               
chr27:20828966-20828384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
124-682
               

               
Cow position:
               
chr27:25411755-25411192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 44
               

               
Conread position:
               
126-631
               

               
Cow position:
               
chr27:21669369-21668853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
128-661
               

               
Cow position:
               
chr27:28206549-28207100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
128-676
               

               
Cow position:
               
chr27:8062606-8062045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
129-684
               

               
Cow position:
               
chr27:23128208-23128777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
130-670
               

               
Cow position:
               
chr27:8962498-8961958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
130-675
               

               
Cow position:
               
chr27:27606547-27606029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
130-677
               

               
Cow position:
               
chr27:22171049-22171616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
131-660
               

               
Cow position:
               
chr27:20283394-20283924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
132-681
               

               
Cow position:
               
chr27:27020349-27019781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
135-488
               

               
Cow position:
               
chr27:20093062-20092712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
135-586
               

               
Cow position:
               
chr27:13639238-13638768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
135-593
               

               
Cow position:
               
chr27:30890052-30890517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
135-668
               

               
Cow position:
               
chr27:8353246-8353772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
136-647
               

               
Cow position:
               
chr27:6541390-6541906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
136-682
               

               
Cow position:
               
chr27:15865967-15866544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
137-564
               

               
Cow position:
               
chr27:19685955-19685516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
137-684
               

               
Cow position:
               
chr27:31231325-31230770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
138-585
               

               
Cow position:
               
chr27:2592292-2592764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
138-648
               

               
Cow position:
               
chr27:6499813-6500344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
138-682
               

               
Cow position:
               
chr27:25809761-25809200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
139-628
               

               
Cow position:
               
chr27:30407292-30406762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 259
               

               
Conread position:
               
144-474
               

               
Cow position:
               
chr27:27695015-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
151-496
               

               
Cow position:
               
chr27:4858851-4858518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
151-527
               

               
Cow position:
               
chr27:19669037-19668627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
151-537
               

               
Cow position:
               
chr27:15409257-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
151-583
               

               
Cow position:
               
chr27:10307535-10307074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
151-583
               

               
Cow position:
               
chr27:27632825-27632388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
151-595
               

               
Cow position:
               
chr27:10979628-10980097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
151-595
               

               
Cow position:
               
chr27:24331482-24331959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
151-616
               

               
Cow position:
               
chr27:18507413-18507889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
151-623
               

               
Cow position:
               
chr27:2957185-2957668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
151-627
               

               
Cow position:
               
chr27:7412162-7412651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
151-640
               

               
Cow position:
               
chr27:18558126-18558660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
151-644
               

               
Cow position:
               
chr27:28190423-28189932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
151-665
               

               
Cow position:
               
chr27:26865340-26864827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
151-680
               

               
Cow position:
               
chr27:16786599-16787153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
151-682
               

               
Cow position:
               
chr27:8630105-8629551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
151-682
               

               
Cow position:
               
chr27:10992142-10992690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
151-682
               

               
Cow position:
               
chr27:26224488-26223946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
151-682
               

               
Cow position:
               
chr27:26999655-26999102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
151-684
               

               
Cow position:
               
chr27:15926565-15927097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
151-684
               

               
Cow position:
               
chr27:26984122-26984663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
154-394
               

               
Cow position:
               
chr27:23108131-23107875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
154-498
               

               
Cow position:
               
chr27:16103582-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
154-537
               

               
Cow position:
               
chr27:28496600-28496203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
154-564
               

               
Cow position:
               
chr27:15669003-15668569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
154-589
               

               
Cow position:
               
chr27:23554558-23554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
154-595
               

               
Cow position:
               
chr27:16284260-16284706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
154-603
               

               
Cow position:
               
chr27:29494127-29493673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
154-628
               

               
Cow position:
               
chr27:31373201-31372711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
154-659
               

               
Cow position:
               
chr27:16959969-16960496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
154-680
               

               
Cow position:
               
chr27:299603-299062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
154-684
               

               
Cow position:
               
chr27:22602946-22603487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 213
               

               
Conread position:
               
156-562
               

               
Cow position:
               
chr27:26238797-26239220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
156-682
               

               
Cow position:
               
chr27:6073710-6074239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
157-550
               

               
Cow position:
               
chr27:29431250-29431640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
157-595
               

               
Cow position:
               
chr27:26643477-26643906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
157-616
               

               
Cow position:
               
chr27:26509382-26508904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
157-665
               

               
Cow position:
               
chr27:1637152-1636641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
157-675
               

               
Cow position:
               
chr27:24446364-24445841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 26
               

               
Conread position:
               
158-682
               

               
Cow position:
               
chr27:14670605-14670058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
160-659
               

               
Cow position:
               
chr27:26424799-26424289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
160-684
               

               
Cow position:
               
chr27:30417471-30417998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
172-682
               

               
Cow position:
               
chr27:31219057-31219558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
177-527
               

               
Cow position:
               
chr27:19896556-19896918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
179-465
               

               
Cow position:
               
chr27:20481561-20481276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
179-625
               

               
Cow position:
               
chr27:6550250-6550717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
186-684
               

               
Cow position:
               
chr27:22418962-22418442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
210-672
               

               
Cow position:
               
chr27:20758196-20757745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
218-562
               

               
Cow position:
               
chr27:18593113-18593464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
225-452
               

               
Cow position:
               
chr27:15378626-15378390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
249-478
               

               
Cow position:
               
chr27:16625771-16626010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 211
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr27:26426104-26426375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
269-682
               

               
Cow position:
               
chr27:25783517-25783907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
270-684
               

               
Cow position:
               
chr27:4664379-4664797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
277-602
               

               
Cow position:
               
chr27:27204512-27204186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 214
               

               
Conread position:
               
279-684
               

               
Cow position:
               
chr27:30683815-30684233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
282-505
               

               
Cow position:
               
chr27:17331411-17331642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
284-558
               

               
Cow position:
               
chr27:2683228-2682951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
286-505
               

               
Cow position:
               
chr27:20789460-20789240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 202
               

               
Conread position:
               
286-525
               

               
Cow position:
               
chr27:16780785-16781024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
286-577
               

               
Cow position:
               
chr27:26218620-26218910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
287-458
               

               
Cow position:
               
chr27:23510907-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
287-490
               

               
Cow position:
               
chr27:22569704-22569898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
287-513
               

               
Cow position:
               
chr27:29312754-29312522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
287-520
               

               
Cow position:
               
chr27:22513757-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
287-545
               

               
Cow position:
               
chr27:3817-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
287-547
               

               
Cow position:
               
chr27:22454855-22454599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
287-556
               

               
Cow position:
               
chr27:20037196-20036938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
287-556
               

               
Cow position:
               
chr27:26150938-26151210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
287-557
               

               
Cow position:
               
chr27:11296190-11296449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
287-568
               

               
Cow position:
               
chr27:25277060-25277338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
146, 201
               

               
Conread position:
               
287-574
               

               
Cow position:
               
chr27:19648022-19647735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
287-581
               

               
Cow position:
               
chr27:30354424-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
287-583
               

               
Cow position:
               
chr27:27641092-27640771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
287-586
               

               
Cow position:
               
chr27:4835686-4835384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
287-595
               

               
Cow position:
               
chr27:30988717-30989024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
287-630
               

               
Cow position:
               
chr27:23483144-23483496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
287-640
               

               
Cow position:
               
chr27:7935236-7934883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
287-661
               

               
Cow position:
               
chr27:26959694-26959322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
287-662
               

               
Cow position:
               
chr27:26413334-26412954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 198
               

               
Conread position:
               
287-668
               

               
Cow position:
               
chr27:11536185-11535789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
287-673
               

               
Cow position:
               
chr27:24477337-24477714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
287-679
               

               
Cow position:
               
chr27:25379909-25380317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 185
               

               
Conread position:
               
287-680
               

               
Cow position:
               
chr27:21351102-21350694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
287-680
               

               
Cow position:
               
chr27:23472176-23472569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 64
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:815282-815688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:1122952-1123340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:4386141-4385745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:4672933-4673338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 302
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:7212793-7212399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:12246574-12246968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:17472728-17473145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:20549789-20549361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 419
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:22426912-22426506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:26433887-26433491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:27460652-27460267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
287-682
               

               
Cow position:
               
chr27:30582654-30583060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 179
               

               
Conread position:
               
287-684
               

               
Cow position:
               
chr27:4805981-4805585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
287-684
               

               
Cow position:
               
chr27:15178121-15178538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
288-671
               

               
Cow position:
               
chr27:6454129-6454525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
289-564
               

               
Cow position:
               
chr27:21569919-21569645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
289-682
               

               
Cow position:
               
chr27:20628991-20629351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 46
               

               
Conread position:
               
290-585
               

               
Cow position:
               
chr27:4812960-4812654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
290-587
               

               
Cow position:
               
chr27:24321109-24321413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
290-649
               

               
Cow position:
               
chr27:20068052-20067692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
290-670
               

               
Cow position:
               
chr27:21393584-21393196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
290-682
               

               
Cow position:
               
chr27:10582296-10582686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
290-682
               

               
Cow position:
               
chr27:21978212-21977814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
291-558
               

               
Cow position:
               
chr27:18739301-18739580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 209
               

               
Conread position:
               
291-566
               

               
Cow position:
               
chr27:27245430-27245152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
291-589
               

               
Cow position:
               
chr27:20795714-20796011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
292-566
               

               
Cow position:
               
chr27:30550920-30551196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
70, 189
               

               
Conread position:
               
292-665
               

               
Cow position:
               
chr27:29798879-29799248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
292-669
               

               
Cow position:
               
chr27:2589644-2590031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
292-682
               

               
Cow position:
               
chr27:8188072-8187667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:527159-526755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:3339709-3340113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:12016263-12016665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:13421914-13422318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:15100889-15100485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:18620729-18621125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
292-684
               

               
Cow position:
               
chr27:20859361-20858964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
294-669
               

               
Cow position:
               
chr27:6522971-6523365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
295-522
               

               
Cow position:
               
chr27:154291-154525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
295-684
               

               
Cow position:
               
chr27:31566660-31566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
297-684
               

               
Cow position:
               
chr27:524266-523867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
299-586
               

               
Cow position:
               
chr27:6058434-6058726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
300-564
               

               
Cow position:
               
chr27:1183951-1183678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
300-661
               

               
Cow position:
               
chr27:27141535-27141894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 49
               

               
Conread position:
               
300-682
               

               
Cow position:
               
chr27:16237842-16238219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
305-535
               

               
Cow position:
               
chr27:22268439-22268674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
305-584
               

               
Cow position:
               
chr27:28038401-28038115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
306-564
               

               
Cow position:
               
chr27:28061822-28061564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 180
               

               
Conread position:
               
306-642
               

               
Cow position:
               
chr27:13843147-13843487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
306-680
               

               
Cow position:
               
chr27:27049972-27049602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 177
               

               
Conread position:
               
307-564
               

               
Cow position:
               
chr27:29283468-29283212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
307-577
               

               
Cow position:
               
chr27:27528415-27528146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
307-595
               

               
Cow position:
               
chr27:24014799-24014508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
307-661
               

               
Cow position:
               
chr27:27856273-27856643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
307-681
               

               
Cow position:
               
chr27:4829864-4829493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
307-682
               

               
Cow position:
               
chr27:4819765-4819388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
307-682
               

               
Cow position:
               
chr27:30868800-30868417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
307-684
               

               
Cow position:
               
chr27:27449494-27449112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
308-575
               

               
Cow position:
               
chr27:16871975-16871706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 180
               

               
Conread position:
               
308-593
               

               
Cow position:
               
chr27:27389080-27388797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
308-595
               

               
Cow position:
               
chr27:26441115-26440825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
308-615
               

               
Cow position:
               
chr27:160435-160746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
308-625
               

               
Cow position:
               
chr27:29198608-29198279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr27:19552491-19552156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-634
               

               
Cow position:
               
chr27:773090-773428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-640
               

               
Cow position:
               
chr27:1523237-1522893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-648
               

               
Cow position:
               
chr27:8932201-8932555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-659
               

               
Cow position:
               
chr27:26787422-26787064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
308-667
               

               
Cow position:
               
chr27:28982965-28982597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
308-681
               

               
Cow position:
               
chr27:24227852-24227471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
308-682
               

               
Cow position:
               
chr27:20641394-20641020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
308-683
               

               
Cow position:
               
chr27:1030323-1030707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-683
               

               
Cow position:
               
chr27:29445874-29446258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 93
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:33024-32638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:652018-651632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:1521913-1521525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:3650716-3650328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:4769549-4769161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:5989823-5990206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:8742871-8743257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:11605658-11606040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:11651016-11651404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:12005447-12005835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:12007382-12006994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:12502348-12501960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:16045959-16045576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:18811623-18812012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:19325437-19325825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:19486750-19487138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:22796426-22796813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:23080320-23079932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:26341684-26341296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:26584243-26584629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:27630802-27630416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:29035148-29035536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:29373674-29374060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:29797468-29797082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:30015138-30014750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:30271088-30271476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
308-684
               

               
Cow position:
               
chr27:30361143-30361531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
309-540
               

               
Cow position:
               
chr27:9169704-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 174
               

               
Conread position:
               
309-585
               

               
Cow position:
               
chr27:27259556-27259831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
309-591
               

               
Cow position:
               
chr27:706892-707176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
309-595
               

               
Cow position:
               
chr27:14902711-14902416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
309-615
               

               
Cow position:
               
chr27:15204287-15203975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
309-618
               

               
Cow position:
               
chr27:27844056-27843734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
309-629
               

               
Cow position:
               
chr27:11273519-11273839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
309-644
               

               
Cow position:
               
chr27:30362188-30362528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
309-669
               

               
Cow position:
               
chr27:18543934-18544308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 137
               

               
Conread position:
               
309-680
               

               
Cow position:
               
chr27:536405-536774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
309-681
               

               
Cow position:
               
chr27:22254823-22255209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
309-681
               

               
Cow position:
               
chr27:22440084-22440464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
309-682
               

               
Cow position:
               
chr27:24999798-24999413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
309-682
               

               
Cow position:
               
chr27:25790746-25791135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
309-682
               

               
Cow position:
               
chr27:26786048-26785659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
309-684
               

               
Cow position:
               
chr27:26807618-26807241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
310-583
               

               
Cow position:
               
chr27:26380229-26379956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
310-584
               

               
Cow position:
               
chr27:18967814-18967534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
310-673
               

               
Cow position:
               
chr27:23576595-23576225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
310-676
               

               
Cow position:
               
chr27:26653251-26653622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
310-684
               

               
Cow position:
               
chr27:2298349-2298737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 233
               

               
Conread position:
               
310-684
               

               
Cow position:
               
chr27:8292058-8291686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
311-577
               

               
Cow position:
               
chr27:20368974-20369254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
311-683
               

               
Cow position:
               
chr27:27038897-27038517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
312-564
               

               
Cow position:
               
chr27:1498260-1498512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 179
               

               
Conread position:
               
312-676
               

               
Cow position:
               
chr27:9371460-9371817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
313-684
               

               
Cow position:
               
chr27:3690415-3690798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
314-591
               

               
Cow position:
               
chr27:20543893-20544183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
314-647
               

               
Cow position:
               
chr27:23882427-23882077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
314-682
               

               
Cow position:
               
chr27:15867343-15867710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
314-682
               

               
Cow position:
               
chr27:23070412-23070040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
314-684
               

               
Cow position:
               
chr27:732519-732888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
314-684
               

               
Cow position:
               
chr27:11489333-11488964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
316-609
               

               
Cow position:
               
chr27:3638879-3638574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
316-625
               

               
Cow position:
               
chr27:27700080-27699759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
316-670
               

               
Cow position:
               
chr27:16513925-16513571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
316-670
               

               
Cow position:
               
chr27:27136571-27136224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 168
               

               
Conread position:
               
316-677
               

               
Cow position:
               
chr27:30792988-30792612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
316-682
               

               
Cow position:
               
chr27:26428185-26427805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr27:15643123-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
317-610
               

               
Cow position:
               
chr27:23929925-23930215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
322-682
               

               
Cow position:
               
chr27:22330718-22330337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 185
               

               
Conread position:
               
322-684
               

               
Cow position:
               
chr27:26398303-26397945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
324-681
               

               
Cow position:
               
chr27:27040559-27040919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
324-684
               

               
Cow position:
               
chr27:7290148-7289784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
324-684
               

               
Cow position:
               
chr27:15349858-15349477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
325-661
               

               
Cow position:
               
chr27:15859131-15858789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
325-681
               

               
Cow position:
               
chr27:30856426-30856080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 67
               

               
Conread position:
               
327-684
               

               
Cow position:
               
chr27:5915722-5915350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
327-684
               

               
Cow position:
               
chr27:18446631-18446256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
327-684
               

               
Cow position:
               
chr27:20811632-20811262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
328-681
               

               
Cow position:
               
chr27:29515891-29515539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
328-684
               

               
Cow position:
               
chr27:5881741-5881374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
328-684
               

               
Cow position:
               
chr27:10384639-10384277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
328-684
               

               
Cow position:
               
chr27:25923753-25924107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
334-681
               

               
Cow position:
               
chr27:19717891-19718241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
334-682
               

               
Cow position:
               
chr27:16263309-16263638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
335-528
               

               
Cow position:
               
chr27:30872091-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
335-547
               

               
Cow position:
               
chr27:27550773-27550566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr27:18031100-18030861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 223
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr27:18215021-18215254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
335-575
               

               
Cow position:
               
chr27:28164435-28164198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
335-623
               

               
Cow position:
               
chr27:668298-667998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
335-626
               

               
Cow position:
               
chr27:6909477-6909773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
335-631
               

               
Cow position:
               
chr27:26952500-26952809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
335-660
               

               
Cow position:
               
chr27:27810102-27809765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
335-668
               

               
Cow position:
               
chr27:14632808-14633146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
335-676
               

               
Cow position:
               
chr27:27684153-27683798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
68, 274
               

               
Conread position:
               
335-677
               

               
Cow position:
               
chr27:13410202-13409847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr27:13182109-13182453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr27:21408595-21408228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr27:30560881-30561239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:1655306-1654945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:2002051-2001690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:8958810-8959171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:10590711-10590350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:17402860-17403221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr27:24240912-24241273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
337-656
               

               
Cow position:
               
chr27:23015824-23016153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
337-662
               

               
Cow position:
               
chr27:10580143-10579806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
337-683
               

               
Cow position:
               
chr27:19931122-19931477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:1189845-1189488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:1675340-1675695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:3240046-3239687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:12097561-12097920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:16182047-16182389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
337-684
               

               
Cow position:
               
chr27:28907034-28907390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
338-682
               

               
Cow position:
               
chr27:26141741-26142117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
339-556
               

               
Cow position:
               
chr27:20591955-20592174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
339-583
               

               
Cow position:
               
chr27:30765007-30765253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
339-628
               

               
Cow position:
               
chr27:14906698-14907000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
339-682
               

               
Cow position:
               
chr27:2899784-2900131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
339-683
               

               
Cow position:
               
chr27:16305803-16305456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:2390262-2390620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:4881574-4881933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:4983635-4983276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:11482121-11481776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:12549071-12549434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
29, 214
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:14129472-14129828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 198
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:19522504-19522863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:20138030-20137672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
339-684
               

               
Cow position:
               
chr27:28984971-28984616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
340-684
               

               
Cow position:
               
chr27:11402886-11403233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
341-570
               

               
Cow position:
               
chr27:27055547-27055783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
341-682
               

               
Cow position:
               
chr27:13197893-13198228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
342-684
               

               
Cow position:
               
chr27:5853952-5853592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
342-684
               

               
Cow position:
               
chr27:14298388-14298035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
342-684
               

               
Cow position:
               
chr27:17763399-17763746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
343-564
               

               
Cow position:
               
chr27:30605656-30605881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
343-575
               

               
Cow position:
               
chr27:17926646-17926424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
343-650
               

               
Cow position:
               
chr27:26919926-26919622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
344-537
               

               
Cow position:
               
chr27:13841347-13841548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
344-564
               

               
Cow position:
               
chr27:27003298-27003083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
344-583
               

               
Cow position:
               
chr27:31217188-31216942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
344-680
               

               
Cow position:
               
chr27:1058705-1058362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
344-684
               

               
Cow position:
               
chr27:2332696-2332346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 313
               

               
Conread position:
               
345-682
               

               
Cow position:
               
chr27:5837022-5836677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
345-682
               

               
Cow position:
               
chr27:28276254-28276591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
345-684
               

               
Cow position:
               
chr27:2556791-2557137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
345-684
               

               
Cow position:
               
chr27:3988586-3988934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
345-684
               

               
Cow position:
               
chr27:15032700-15033046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
345-684
               

               
Cow position:
               
chr27:15644481-15644132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
345-684
               

               
Cow position:
               
chr27:21349764-21349423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
346-684
               

               
Cow position:
               
chr27:22655400-22655052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
348-532
               

               
Cow position:
               
chr27:18434490-18434304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
348-647
               

               
Cow position:
               
chr27:26581458-26581158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
348-670
               

               
Cow position:
               
chr27:29207793-29208107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
349-555
               

               
Cow position:
               
chr27:30670723-30670927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr27:31147689-31147440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
350-547
               

               
Cow position:
               
chr27:25676208-25676408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr27:27554703-27554495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
350-583
               

               
Cow position:
               
chr27:30374591-30374349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
350-647
               

               
Cow position:
               
chr27:19589457-19589763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
350-682
               

               
Cow position:
               
chr27:9090823-9090478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
350-682
               

               
Cow position:
               
chr27:15319433-15319773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
350-682
               

               
Cow position:
               
chr27:15925323-15925658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
350-682
               

               
Cow position:
               
chr27:27064458-27064121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
351-564
               

               
Cow position:
               
chr27:26885269-26885053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
351-585
               

               
Cow position:
               
chr27:20765975-20765740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
351-610
               

               
Cow position:
               
chr27:27623034-27622762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
351-635
               

               
Cow position:
               
chr27:21138805-21139101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
351-673
               

               
Cow position:
               
chr27:26299818-26300150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 164
               

               
Conread position:
               
351-680
               

               
Cow position:
               
chr27:8942701-8942371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
351-681
               

               
Cow position:
               
chr27:11255503-11255835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
351-682
               

               
Cow position:
               
chr27:19962461-19962800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
351-684
               

               
Cow position:
               
chr27:12148085-12147738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
351-684
               

               
Cow position:
               
chr27:15312184-15312523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
352-628
               

               
Cow position:
               
chr27:11422846-11422559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr27:22498542-22498776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
353-669
               

               
Cow position:
               
chr27:30676893-30677209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
353-682
               

               
Cow position:
               
chr27:23455171-23454827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 215
               

               
Conread position:
               
354-610
               

               
Cow position:
               
chr27:15200686-15200946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
354-669
               

               
Cow position:
               
chr27:30177590-30177260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
354-684
               

               
Cow position:
               
chr27:9045645-9045986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
355-631
               

               
Cow position:
               
chr27:12429391-12429684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
355-662
               

               
Cow position:
               
chr27:490884-491190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
357-640
               

               
Cow position:
               
chr27:28518284-28518558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
359-616
               

               
Cow position:
               
chr27:11815767-11815505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
359-676
               

               
Cow position:
               
chr27:27737935-27737616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
359-682
               

               
Cow position:
               
chr27:12231920-12231585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 134
               

               
Conread position:
               
360-564
               

               
Cow position:
               
chr27:29250870-29251078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
360-657
               

               
Cow position:
               
chr27:29977244-29977553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
360-667
               

               
Cow position:
               
chr27:13860742-13860437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
360-682
               

               
Cow position:
               
chr27:16292404-16292717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
361-682
               

               
Cow position:
               
chr27:15271904-15272229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
363-583
               

               
Cow position:
               
chr27:29019757-29019525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
363-680
               

               
Cow position:
               
chr27:26857201-26856890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
366-667
               

               
Cow position:
               
chr27:24559447-24559143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
367-566
               

               
Cow position:
               
chr27:22771750-22771958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
371-586
               

               
Cow position:
               
chr27:4390252-4390030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
371-586
               

               
Cow position:
               
chr27:26625134-26625347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
373-656
               

               
Cow position:
               
chr27:164683-164977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
373-684
               

               
Cow position:
               
chr27:724715-724390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
373-684
               

               
Cow position:
               
chr27:26331072-26330743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
373-684
               

               
Cow position:
               
chr27:26463886-26463561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
374-667
               

               
Cow position:
               
chr27:222056-221749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
374-684
               

               
Cow position:
               
chr27:5861203-5861530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
375-653
               

               
Cow position:
               
chr27:30703069-30702793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
377-681
               

               
Cow position:
               
chr27:9988718-9989029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
377-684
               

               
Cow position:
               
chr27:8973609-8973291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 213
               

               
Conread position:
               
377-684
               

               
Cow position:
               
chr27:12240307-12239991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
380-670
               

               
Cow position:
               
chr27:23452498-23452785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
380-672
               

               
Cow position:
               
chr27:12751677-12751378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
384-669
               

               
Cow position:
               
chr27:3231143-3231436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
387-625
               

               
Cow position:
               
chr27:1672247-1672006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
392-684
               

               
Cow position:
               
chr27:13442823-13442513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 158
               

               
Conread position:
               
393-641
               

               
Cow position:
               
chr27:2643897-2643657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
396-682
               

               
Cow position:
               
chr27:1294382-1294095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
396-684
               

               
Cow position:
               
chr27:2628044-2627747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
396-684
               

               
Cow position:
               
chr27:5882485-5882188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
396-684
               

               
Cow position:
               
chr27:9335331-9335036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
396-684
               

               
Cow position:
               
chr27:20372800-20372503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 252
               

               
Conread position:
               
400-641
               

               
Cow position:
               
chr27:22723669-22723431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
400-679
               

               
Cow position:
               
chr27:22549749-22549467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 244
               

               
Conread position:
               
400-682
               

               
Cow position:
               
chr27:28018369-28018656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
401-547
               

               
Cow position:
               
chr27:13252043-13252191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
401-644
               

               
Cow position:
               
chr27:29399852-29400102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
401-670
               

               
Cow position:
               
chr27:29831653-29831377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
401-682
               

               
Cow position:
               
chr27:15871197-15871485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
401-682
               

               
Cow position:
               
chr27:22179757-22179464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
401-684
               

               
Cow position:
               
chr27:13317922-13317640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 171
               

               
Conread position:
               
403-662
               

               
Cow position:
               
chr27:23124319-23124053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
403-682
               

               
Cow position:
               
chr27:16620025-16620311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
405-669
               

               
Cow position:
               
chr27:29309063-29309332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
406-586
               

               
Cow position:
               
chr27:2012061-2011879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
407-682
               

               
Cow position:
               
chr27:4719850-4719573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
408-654
               

               
Cow position:
               
chr27:26617412-26617656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
410-649
               

               
Cow position:
               
chr27:30508717-30508474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 164
               

               
Conread position:
               
414-537
               

               
Cow position:
               
chr27:26322400-26322526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
414-675
               

               
Cow position:
               
chr27:6674286-6674551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
415-682
               

               
Cow position:
               
chr27:4825062-4824793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
144, 69
               

               
Conread position:
               
416-678
               

               
Cow position:
               
chr27:18922503-18922769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
417-682
               

               
Cow position:
               
chr27:27521956-27521681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr27:11417844-11417567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr27:16030277-16030552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr27:24055798-24055543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr27:26597924-26598200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
419-566
               

               
Cow position:
               
chr27:23558334-23558185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 146
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr27:20066302-20066040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr27:9337572-9337836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr27:30389164-30388894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr27:14530794-14530519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
420-575
               

               
Cow position:
               
chr27:1884093-1884248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
420-679
               

               
Cow position:
               
chr27:30784039-30783772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
422-654
               

               
Cow position:
               
chr27:8195275-8195511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
423-564
               

               
Cow position:
               
chr27:30436314-30436458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
428-644
               

               
Cow position:
               
chr27:3256106-3256322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
432-658
               

               
Cow position:
               
chr27:67163-66929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
432-659
               

               
Cow position:
               
chr27:10987016-10986789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
432-659
               

               
Cow position:
               
chr27:20869636-20869387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
432-665
               

               
Cow position:
               
chr27:9436902-9436656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
432-668
               

               
Cow position:
               
chr27:9254047-9254279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
433-575
               

               
Cow position:
               
chr27:26406975-26406830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
433-684
               

               
Cow position:
               
chr27:26161566-26161830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
435-676
               

               
Cow position:
               
chr27:11723837-11723587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
437-547
               

               
Cow position:
               
chr27:68369-68259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-564
               

               
Cow position:
               
chr27:13847712-13847837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
437-578
               

               
Cow position:
               
chr27:21453000-21452854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
437-595
               

               
Cow position:
               
chr27:2930523-2930363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
437-595
               

               
Cow position:
               
chr27:26935846-26935685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
437-661
               

               
Cow position:
               
chr27:25982637-25982414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
437-670
               

               
Cow position:
               
chr27:23731455-23731215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
437-671
               

               
Cow position:
               
chr27:190782-191019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
437-676
               

               
Cow position:
               
chr27:1173475-1173226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
437-676
               

               
Cow position:
               
chr27:26595502-26595745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
437-677
               

               
Cow position:
               
chr27:11091132-11090874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
437-677
               

               
Cow position:
               
chr27:11693662-11693425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr27:20866453-20866210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr27:26944966-26945204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:2901172-2900920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:8589438-8589182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:10284252-10283988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:25970581-25970830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:31372218-31371972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr27:1903131-1903386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr27:12278194-12277956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
437-684
               

               
Cow position:
               
chr27:264322-264571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
437-684
               

               
Cow position:
               
chr27:13411280-13411036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
437-684
               

               
Cow position:
               
chr27:16822887-16823135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
438-615
               

               
Cow position:
               
chr27:22293636-22293456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
438-669
               

               
Cow position:
               
chr27:11412796-11413025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 6
               

               
Conread position:
               
438-679
               

               
Cow position:
               
chr27:23984537-23984780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
438-682
               

               
Cow position:
               
chr27:7958759-7958512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
438-682
               

               
Cow position:
               
chr27:20634528-20634774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:1481994-1481739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:13878313-13878045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:13895795-13895539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:17476126-17476368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:19299465-19299720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:19423274-19423529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:26015484-26015738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:30306176-30306431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:31365599-31365854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
439-656
               

               
Cow position:
               
chr27:9977903-9978123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
439-670
               

               
Cow position:
               
chr27:18955125-18954900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
439-670
               

               
Cow position:
               
chr27:28293253-28293481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
164, 26
               

               
Conread position:
               
439-671
               

               
Cow position:
               
chr27:12650555-12650324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
439-674
               

               
Cow position:
               
chr27:16099950-16099702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
439-679
               

               
Cow position:
               
chr27:18438979-18439228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
439-682
               

               
Cow position:
               
chr27:28107059-28106813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
440-675
               

               
Cow position:
               
chr27:18205411-18205647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
440-677
               

               
Cow position:
               
chr27:24938243-24938005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
441-596
               

               
Cow position:
               
chr27:22609063-22608902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
442-669
               

               
Cow position:
               
chr27:6899639-6899404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
442-682
               

               
Cow position:
               
chr27:29341473-29341221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
445-684
               

               
Cow position:
               
chr27:24295170-24295415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
448-679
               

               
Cow position:
               
chr27:12057965-12058200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
448-679
               

               
Cow position:
               
chr27:19627202-19626965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
449-585
               

               
Cow position:
               
chr27:7094497-7094632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
449-657
               

               
Cow position:
               
chr27:20092532-20092324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
449-668
               

               
Cow position:
               
chr27:22394253-22394478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
449-682
               

               
Cow position:
               
chr27:23511206-23511442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
452-560
               

               
Cow position:
               
chr27:23736174-23736284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
452-628
               

               
Cow position:
               
chr27:27455371-27455188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
452-657
               

               
Cow position:
               
chr27:24167888-24167673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
452-669
               

               
Cow position:
               
chr27:8534670-8534893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
452-676
               

               
Cow position:
               
chr27:7418799-7418561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
452-679
               

               
Cow position:
               
chr27:28895792-28895558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
452-682
               

               
Cow position:
               
chr27:23595361-23595593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
453-659
               

               
Cow position:
               
chr27:23793588-23793797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
454-684
               

               
Cow position:
               
chr27:15632486-15632722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
455-661
               

               
Cow position:
               
chr27:11774648-11774437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 149
               

               
Conread position:
               
456-657
               

               
Cow position:
               
chr27:13977304-13977092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
456-669
               

               
Cow position:
               
chr27:17646108-17645888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
456-672
               

               
Cow position:
               
chr27:27578661-27578883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 212
               

               
Conread position:
               
457-684
               

               
Cow position:
               
chr27:11634063-11634300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
458-684
               

               
Cow position:
               
chr27:13902204-13901969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
459-684
               

               
Cow position:
               
chr27:26545828-26545599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
462-660
               

               
Cow position:
               
chr27:18218638-18218845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
462-682
               

               
Cow position:
               
chr27:13273912-13273687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
462-682
               

               
Cow position:
               
chr27:16331442-16331656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
462-683
               

               
Cow position:
               
chr27:28146554-28146325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
462-684
               

               
Cow position:
               
chr27:834450-834219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
464-682
               

               
Cow position:
               
chr27:427222-427442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
468-684
               

               
Cow position:
               
chr27:30198378-30198600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
469-669
               

               
Cow position:
               
chr27:3730211-3730004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
470-667
               

               
Cow position:
               
chr27:24066414-24066217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
472-670
               

               
Cow position:
               
chr27:197402-197607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
472-681
               

               
Cow position:
               
chr27:27931318-27931112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
472-684
               

               
Cow position:
               
chr27:2430129-2429910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
472-684
               

               
Cow position:
               
chr27:20749935-20749716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
473-682
               

               
Cow position:
               
chr27:20636972-20636753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
473-682
               

               
Cow position:
               
chr27:23894398-23894182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
474-682
               

               
Cow position:
               
chr27:16983897-16984110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
476-682
               

               
Cow position:
               
chr27:12191339-12191126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
476-682
               

               
Cow position:
               
chr27:30921266-30921474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
476-684
               

               
Cow position:
               
chr27:16260856-16260641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
478-578
               

               
Cow position:
               
chr27:1564939-1565042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr27:17463038-17462822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr27:21564770-21564981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr27:26935262-26935048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr27:29812360-29812147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
480-670
               

               
Cow position:
               
chr27:22108147-22107950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
480-684
               

               
Cow position:
               
chr27:6292485-6292695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
484-676
               

               
Cow position:
               
chr27:15343007-15342815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
484-679
               

               
Cow position:
               
chr27:27187292-27187102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
484-682
               

               
Cow position:
               
chr27:26314079-26313878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
485-680
               

               
Cow position:
               
chr27:21283197-21283395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
485-682
               

               
Cow position:
               
chr27:23502583-23502784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
488-674
               

               
Cow position:
               
chr27:12261505-12261689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
491-682
               

               
Cow position:
               
chr27:20635977-20636172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
491-684
               

               
Cow position:
               
chr27:1906195-1906394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
492-677
               

               
Cow position:
               
chr27:26833307-26833491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
492-684
               

               
Cow position:
               
chr27:26796098-26796302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
493-684
               

               
Cow position:
               
chr27:27292723-27292528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
501-676
               

               
Cow position:
               
chr27:27897112-27896930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr27:17926174-17925998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
510-684
               

               
Cow position:
               
chr27:9262251-9262427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr27:15408257-15408100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
539-676
               

               
Cow position:
               
chr27:7277916-7277777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
539-682
               

               
Cow position:
               
chr27:23148354-23148205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
546-684
               

               
Cow position:
               
chr27:20799398-20799257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
546-684
               

               
Cow position:
               
chr27:29234585-29234730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
559-684
               

               
Cow position:
               
chr27:19146657-19146530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
564-681
               

               
Cow position:
               
chr27:1769082-1768962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
564-682
               

               
Cow position:
               
chr27:26009990-26010109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr27:2570059-2569936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr27:14125557-14125434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr27:15643878-15643755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr27:21297102-21297225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
564-684
               

               
Cow position:
               
chr27:31397370-31397493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
565-679
               

               
Cow position:
               
chr27:12411956-12411839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
565-684
               

               
Cow position:
               
chr27:26367159-26367037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
565-684
               

               
Cow position:
               
chr27:29830289-29830168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
566-684
               

               
Cow position:
               
chr27:3652734-3652854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
567-682
               

               
Cow position:
               
chr27:26135467-26135581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
567-684
               

               
Cow position:
               
chr27:12001423-12001303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
572-680
               

               
Cow position:
               
chr27:26219145-26219256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
575-684
               

               
Cow position:
               
chr27:20000858-20000970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
579-677
               

               
Cow position:
               
chr27:13638745-13638647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
579-681
               

               
Cow position:
               
chr27:343979-344084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
579-682
               

               
Cow position:
               
chr27:25277385-25277488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
579-684
               

               
Cow position:
               
chr27:263739-263633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
583-682
               

               
Cow position:
               
chr27:19647436-19647338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
592-682
               

               
Cow position:
               
chr27:27631127-27631037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
597-679
               

               
Cow position:
               
chr27:14881108-14881190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.