Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM1F020205.5 |
| Conread position: | 1-114 |
| Cow position: | chr13:28870056-28869946 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-114 |
| Cow position: | chr13:28896602-28896489 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-114 |
| Cow position: | chr13:31983591-31983478 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-114 |
| Cow position: | chr13:28846003-28845891 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-280 |
| Cow position: | chr13:28843685-28843516 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-280 |
| Cow position: | chr13:28892963-28892794 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-280 |
| Cow position: | chr13:31981242-31981073 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-280 |
| Cow position: | chr13:28867130-28866969 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-397 |
| Cow position: | chr13:28843236-28843118 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-397 |
| Cow position: | chr13:28866694-28866576 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-397 |
| Cow position: | chr13:28892507-28892389 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-402 |
| Cow position: | chr13:31980802-31980679 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-601 |
| Cow position: | chr13:28841400-28841273 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 119 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-601 |
| Cow position: | chr13:28864786-28864659 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 117 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-601 |
| Cow position: | chr13:28890650-28890523 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-601 |
| Cow position: | chr13:31978728-31978601 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 596-709 |
| Cow position: | chr13:28840479-28840366 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 596-709 |
| Cow position: | chr13:28863813-28863700 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 596-709 |
| Cow position: | chr13:28889730-28889617 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 596-709 |
| Cow position: | chr13:31976739-31976626 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 708-876 |
| Cow position: | chr13:28839515-28839347 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 708-876 |
| Cow position: | chr13:28862649-28862481 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 708-876 |
| Cow position: | chr13:28888742-28888574 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 708-876 |
| Cow position: | chr13:31975778-31975610 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 948-1272 |
| Cow position: | chr13:31963668-31963338 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 962-1272 |
| Cow position: | chr13:28883523-28883203 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 966-1267 |
| Cow position: | chr13:28854775-28854473 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 1010-1272 |
| Cow position: | chr13:31971979-31971718 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 95, 145 |
Show alignments to all cow chromosomes.