Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010006D03.5.5
        

               Conread position:
               1-246
               

               Cow position:
               chrX:43026645-43026399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 244
               

               Conread position:
               240-425
               

               Cow position:
               chrX:43020809-43020624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               424-525
               

               Cow position:
               chrX:43015390-43015289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               523-650
               

               Cow position:
               chrX:43014249-43014122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               648-824
               

               Cow position:
               chrX:43008530-43008354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               825-985
               

               Cow position:
               chrX:43007447-43007287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               979-2049
               

               Cow position:
               chrX:43005455-43004378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1104
               

               Alignm identity:
               863
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 99
               
Show alignments to all cow chromosomes.